RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 SSFA2P28290 1259 aa6.99□□□□□ -1.29
ZEB1-209ENST00000542879 ANKRD45Q5TZF3 282 aa6.99□□□□□ -1.29
ZEB1-209ENST00000542879 SRPK2P78362 688 aaKnown RBP6.98□□□□□ -1.29
ZEB1-209ENST00000542879 IDI1Q13907 227 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 NFE2L2Q16236 605 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 KLHL40Q2TBA0 621 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 TSPYL6Q8N831 410 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 CHMP4BQ9H444 224 aaKnown RBP6.98□□□□□ -1.29
ZEB1-209ENST00000542879 N4BP2Q86UW6 1770 aaPredicted RBP6.98□□□□□ -1.29
ZEB1-209ENST00000542879 RGS12O14924 1447 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 ATP10DQ9P241 1426 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 PRKAR2BP31323 418 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 C1orf115Q9H7X2 142 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 IFT57Q9NWB7 429 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 POLKQ9UBT6 870 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 RGPD1P0DJD0 1748 aa6.98□□□□□ -1.29
ZEB1-209ENST00000542879 CDC45O75419 566 aa6.97□□□□□ -1.29
ZEB1-209ENST00000542879 BAG4O95429 457 aaKnown RBP6.97□□□□□ -1.29
ZEB1-209ENST00000542879 CCDC173Q0VFZ6 552 aa6.97□□□□□ -1.29
ZEB1-209ENST00000542879 SAFB2Q14151 953 aaKnown RBP eCLIP6.97□□□□□ -1.29
ZEB1-209ENST00000542879 PLEKHM2Q8IWE5 1019 aa6.97□□□□□ -1.29
ZEB1-209ENST00000542879 PHACTR3Q96KR7 559 aa6.97□□□□□ -1.29
ZEB1-209ENST00000542879 CPSF1Q10570 1443 aaKnown RBP6.97□□□□□ -1.29
ZEB1-209ENST00000542879 FAM208AQ9UK61 1670 aaKnown RBP6.97□□□□□ -1.29
ZEB1-209ENST00000542879 ZNF445P59923 1031 aa6.97□□□□□ -1.29
ZEB1-209ENST00000542879 HSP90AA1P07900 732 aaKnown RBP6.97□□□□□ -1.29
ZEB1-209ENST00000542879 PRAM1Q96QH2 718 aa6.97□□□□□ -1.29
ZEB1-209ENST00000542879 MBIPQ9NS73 344 aa6.97□□□□□ -1.29
ZEB1-209ENST00000542879 MINK1Q8N4C8 1332 aaPredicted RBP6.97□□□□□ -1.29
ZEB1-209ENST00000542879 COL24A1Q17RW2 1714 aa6.96□□□□□ -1.29
ZEB1-209ENST00000542879 SLC52A1Q9NWF4 448 aa6.96□□□□□ -1.29
ZEB1-209ENST00000542879 RIMS2Q9UQ26 1411 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 KDM4FA0A1W2PPD8 638 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 IL13P35225 146 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 GNAI1P63096 354 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 HDGFL2Q7Z4V5 671 aaPredicted RBP6.96□□□□□ -1.3
ZEB1-209ENST00000542879 DCTPP1Q9H773 170 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 PLEKHG1Q9ULL1 1385 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 RABEP1Q15276 862 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 TTC22Q5TAA0 569 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 CDK19Q9BWU1 502 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 USP26Q9BXU7 913 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 FOXD4L1Q9NU39 408 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 STK26Q9P289 416 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 NWD2Q9ULI1 1742 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 AATKQ6ZMQ8 1374 aa6.96□□□□□ -1.3
ZEB1-209ENST00000542879 TPM2P07951 284 aa6.95□□□□□ -1.3
ZEB1-209ENST00000542879 THUMPD2Q9BTF0 503 aaKnown RBP6.95□□□□□ -1.3
ZEB1-209ENST00000542879 LMBRD1Q9NUN5 540 aa6.95□□□□□ -1.3
ZEB1-209ENST00000542879 EDC4Q6P2E9 1401 aaKnown RBP6.95□□□□□ -1.3
ZEB1-209ENST00000542879 LMO7Q8WWI1 1683 aa6.95□□□□□ -1.3
ZEB1-209ENST00000542879 NASPP49321 788 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-209ENST00000542879 HSP90AA2PQ14568 343 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-209ENST00000542879 TRIM44Q96DX7 344 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-209ENST00000542879 TMEM51Q9NW97 253 aa6.95□□□□□ -1.3
ZEB1-209ENST00000542879 CABP1Q9NZU7 370 aa6.95□□□□□ -1.3
ZEB1-209ENST00000542879 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-209ENST00000542879 INTS3Q68E01 1043 aaKnown RBP6.95□□□□□ -1.3
ZEB1-209ENST00000542879 C8orf58Q8NAV2 365 aa6.95□□□□□ -1.3
ZEB1-209ENST00000542879 PDLIM2Q96JY6 352 aa6.95□□□□□ -1.3
ZEB1-209ENST00000542879 CFAP44Q96MT7 982 aa6.95□□□□□ -1.3
ZEB1-209ENST00000542879 FBLN1P23142 703 aa6.94□□□□□ -1.3
ZEB1-209ENST00000542879 ZSCAN30Q86W11 494 aa6.94□□□□□ -1.3
ZEB1-209ENST00000542879 TCHHQ07283 1943 aa6.94□□□□□ -1.3
ZEB1-209ENST00000542879 CACNA1FO60840 1977 aa6.94□□□□□ -1.3
ZEB1-209ENST00000542879 TWISTNBQ3B726 338 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-209ENST00000542879 HS1BP3Q53T59 392 aa6.94□□□□□ -1.3
ZEB1-209ENST00000542879 API5Q9BZZ5 524 aaKnown RBP6.94□□□□□ -1.3
ZEB1-209ENST00000542879 NRAPQ86VF7 1730 aa6.94□□□□□ -1.3
ZEB1-209ENST00000542879 GOLGA6L22H0YM25 854 aa6.94□□□□□ -1.3
ZEB1-209ENST00000542879 OFD1O75665 1012 aa6.94□□□□□ -1.3
ZEB1-209ENST00000542879 PEAK1Q9H792 1746 aa6.94□□□□□ -1.3
ZEB1-209ENST00000542879 ZDHHC9Q9Y397 364 aa6.94□□□□□ -1.3
ZEB1-209ENST00000542879 DDX49Q9Y6V7 483 aaKnown RBP6.94□□□□□ -1.3
ZEB1-209ENST00000542879 TERF1P54274 439 aa6.93□□□□□ -1.3
ZEB1-209ENST00000542879 NUCB2P80303 420 aa6.93□□□□□ -1.3
ZEB1-209ENST00000542879 PKP1Q13835 747 aa6.93□□□□□ -1.3
ZEB1-209ENST00000542879 ZSCAN23Q3MJ62 389 aa6.93□□□□□ -1.3
ZEB1-209ENST00000542879 ANKRD44Q8N8A2 993 aa6.93□□□□□ -1.3
ZEB1-209ENST00000542879 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.93□□□□□ -1.3
ZEB1-209ENST00000542879 COL16A1Q07092 1604 aaPredicted RBP6.93□□□□□ -1.3
ZEB1-209ENST00000542879 HMOX1P09601 288 aa6.93□□□□□ -1.3
ZEB1-209ENST00000542879 ADAMTS13Q76LX8 1427 aa6.93□□□□□ -1.3
ZEB1-209ENST00000542879 C16orf71Q8IYS4 520 aaPredicted RBP6.93□□□□□ -1.3
ZEB1-209ENST00000542879 CWC22Q9HCG8 908 aaKnown RBP6.93□□□□□ -1.3
ZEB1-209ENST00000542879 EMILIN1Q9Y6C2 1016 aa6.93□□□□□ -1.3
ZEB1-209ENST00000542879 RTL1A6NKG5 1358 aa6.92□□□□□ -1.3
ZEB1-209ENST00000542879 ZNF831Q5JPB2 1677 aa6.92□□□□□ -1.3
ZEB1-209ENST00000542879 GPT2Q8TD30 523 aa6.92□□□□□ -1.3
ZEB1-209ENST00000542879 ZNF500O60304 480 aaPredicted RBP6.92□□□□□ -1.3
ZEB1-209ENST00000542879 MCTP1Q6DN14 999 aa6.92□□□□□ -1.3
ZEB1-209ENST00000542879 CEP85Q6P2H3 762 aa6.92□□□□□ -1.3
ZEB1-209ENST00000542879 OTUD7AQ8TE49 926 aaPredicted RBP6.92□□□□□ -1.3
ZEB1-209ENST00000542879 SIRT1Q96EB6 747 aa6.92□□□□□ -1.3
ZEB1-209ENST00000542879 RBSNQ9H1K0 784 aa6.92□□□□□ -1.3
ZEB1-209ENST00000542879 LRRC37A3O60309 1634 aa6.92□□□□□ -1.3
ZEB1-209ENST00000542879 RAPGEF3O95398 923 aa6.91□□□□□ -1.3
ZEB1-209ENST00000542879 PDIA4P13667 645 aaKnown RBP6.91□□□□□ -1.3
ZEB1-209ENST00000542879 SDSP20132 328 aa6.91□□□□□ -1.3
ZEB1-209ENST00000542879 LMOD3Q0VAK6 560 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms