RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-222ENST00000542777 SGIP1Q9BQI5 828 aa22.38■■□□□ 1.17
DDX11-222ENST00000542777 SHANK3Q9BYB0 1731 aa22.37■■□□□ 1.17
DDX11-222ENST00000542777 KIF20BQ96Q89 1820 aa22.37■■□□□ 1.17
DDX11-222ENST00000542777 USHBP1Q8N6Y0 703 aa22.37■■□□□ 1.17
DDX11-222ENST00000542777 FHDC1Q9C0D6 1143 aaPredicted RBP22.37■■□□□ 1.17
DDX11-222ENST00000542777 DOT1LQ8TEK3 1739 aa22.37■■□□□ 1.17
DDX11-222ENST00000542777 AKT1S1Q96B36 256 aa22.36■■□□□ 1.17
DDX11-222ENST00000542777 SYT17Q9BSW7 474 aa22.36■■□□□ 1.17
DDX11-222ENST00000542777 SMG6Q86US8 1419 aaKnown RBP22.36■■□□□ 1.17
DDX11-222ENST00000542777 HSP90AB2PQ58FF8 381 aa22.35■■□□□ 1.17
DDX11-222ENST00000542777 RAPGEF4Q8WZA2 1011 aa22.35■■□□□ 1.17
DDX11-222ENST00000542777 TIMELESSQ9UNS1 1208 aa22.35■■□□□ 1.17
DDX11-222ENST00000542777 CGNL1Q0VF96 1302 aa22.34■■□□□ 1.17
DDX11-222ENST00000542777 CARD14Q9BXL6 1004 aa22.34■■□□□ 1.17
DDX11-222ENST00000542777 INSRP06213 1382 aa22.34■■□□□ 1.17
DDX11-222ENST00000542777 TATP17735 454 aaPredicted RBP22.33■■□□□ 1.17
DDX11-222ENST00000542777 KCNQ4P56696 695 aa22.33■■□□□ 1.17
DDX11-222ENST00000542777 ARXQ96QS3 562 aa22.33■■□□□ 1.17
DDX11-222ENST00000542777 NSD2O96028 1365 aa22.33■■□□□ 1.17
DDX11-222ENST00000542777 FLT4P35916 1363 aa22.32■■□□□ 1.16
DDX11-222ENST00000542777 KIF24Q5T7B8 1368 aa22.31■■□□□ 1.16
DDX11-222ENST00000542777 SLC16A10Q8TF71 515 aa22.31■■□□□ 1.16
DDX11-222ENST00000542777 LY75O60449 1722 aa22.31■■□□□ 1.16
DDX11-222ENST00000542777 NSD3Q9BZ95 1437 aa22.31■■□□□ 1.16
DDX11-222ENST00000542777 TFCP2L1Q9NZI6 479 aa22.3■■□□□ 1.16
DDX11-222ENST00000542777 QSER1Q2KHR3 1735 aa22.3■■□□□ 1.16
DDX11-222ENST00000542777 PNPLA7Q6ZV29 1317 aa22.29■■□□□ 1.16
DDX11-222ENST00000542777 PCGF6Q9BYE7 350 aa22.28■■□□□ 1.16
DDX11-222ENST00000542777 CCNL1Q9UK58 526 aaPredicted RBP22.28■■□□□ 1.16
DDX11-222ENST00000542777 EMILIN1Q9Y6C2 1016 aa22.28■■□□□ 1.16
DDX11-222ENST00000542777 PCDH11XQ9BZA7 1347 aa22.27■■□□□ 1.16
DDX11-222ENST00000542777 PCDH11YQ9BZA8 1340 aa22.27■■□□□ 1.16
DDX11-222ENST00000542777 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
DDX11-222ENST00000542777 TUBGCP6Q96RT7 1819 aa22.27■■□□□ 1.15
DDX11-222ENST00000542777 PPM1GO15355 546 aaPredicted RBP22.25■■□□□ 1.15
DDX11-222ENST00000542777 POLD1P28340 1107 aa22.25■■□□□ 1.15
DDX11-222ENST00000542777 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
DDX11-222ENST00000542777 CYP27B1O15528 508 aa22.22■■□□□ 1.15
DDX11-222ENST00000542777 POLR3GLQ9BT43 218 aa22.22■■□□□ 1.15
DDX11-222ENST00000542777 COL24A1Q17RW2 1714 aa22.22■■□□□ 1.15
DDX11-222ENST00000542777 MPRIPQ6WCQ1 1025 aa22.21■■□□□ 1.15
DDX11-222ENST00000542777 KLHL34Q8N239 644 aa22.21■■□□□ 1.15
DDX11-222ENST00000542777 MAP2P11137 1827 aaKnown RBP22.21■■□□□ 1.15
DDX11-222ENST00000542777 MSH5O43196 834 aa22.2■■□□□ 1.14
DDX11-222ENST00000542777 WASHC2AQ641Q2 1341 aa22.2■■□□□ 1.14
DDX11-222ENST00000542777 COL23A1Q86Y22 540 aaPredicted RBP22.19■■□□□ 1.14
DDX11-222ENST00000542777 ANKRD26Q9UPS8 1709 aa22.18■■□□□ 1.14
DDX11-222ENST00000542777 CHD4Q14839 1912 aa22.18■■□□□ 1.14
DDX11-222ENST00000542777 PKD1L3Q7Z443 1732 aa22.17■■□□□ 1.14
DDX11-222ENST00000542777 NCAPD2Q15021 1401 aa22.17■■□□□ 1.14
DDX11-222ENST00000542777 PALLDQ8WX93 1383 aa22.17■■□□□ 1.14
DDX11-222ENST00000542777 HMGB2P26583 209 aaKnown RBP22.17■■□□□ 1.14
DDX11-222ENST00000542777 GPR162Q16538 588 aa22.17■■□□□ 1.14
DDX11-222ENST00000542777 EYA1Q99502 592 aa22.17■■□□□ 1.14
DDX11-222ENST00000542777 POLKQ9UBT6 870 aa22.17■■□□□ 1.14
DDX11-222ENST00000542777 SPG7Q9UQ90 795 aa22.17■■□□□ 1.14
DDX11-222ENST00000542777 ITGB4P16144 1822 aa22.17■■□□□ 1.14
DDX11-222ENST00000542777 C5P01031 1676 aa22.17■■□□□ 1.14
DDX11-222ENST00000542777 TOGARAM1Q9Y4F4 1720 aa22.16■■□□□ 1.14
DDX11-222ENST00000542777 NKX1-1Q15270 411 aaPredicted RBP22.15■■□□□ 1.14
DDX11-222ENST00000542777 ZNF784Q8NCA9 323 aaPredicted RBP22.15■■□□□ 1.14
DDX11-222ENST00000542777 SMARCC1Q92922 1105 aaPredicted RBP22.15■■□□□ 1.14
DDX11-222ENST00000542777 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
DDX11-222ENST00000542777 EIF4G2P78344 907 aaKnown RBP eCLIP22.14■■□□□ 1.13
DDX11-222ENST00000542777 TAF1LQ8IZX4 1826 aa22.14■■□□□ 1.13
DDX11-222ENST00000542777 PIGBQ92521 554 aa22.13■■□□□ 1.13
DDX11-222ENST00000542777 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
DDX11-222ENST00000542777 PELP1Q8IZL8 1130 aaKnown RBP22.12■■□□□ 1.13
DDX11-222ENST00000542777 FLAD1Q8NFF5 587 aa22.12■■□□□ 1.13
DDX11-222ENST00000542777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.12■■□□□ 1.13
DDX11-222ENST00000542777 MSL1Q68DK7 614 aa22.11■■□□□ 1.13
DDX11-222ENST00000542777 NLGN2Q8NFZ4 835 aa22.11■■□□□ 1.13
DDX11-222ENST00000542777 EIF4A2Q14240 407 aaKnown RBP22.1■■□□□ 1.13
DDX11-222ENST00000542777 IFNL2Q8IZJ0 200 aa22.09■■□□□ 1.13
DDX11-222ENST00000542777 AK7Q96M32 723 aa22.09■■□□□ 1.13
DDX11-222ENST00000542777 PANK3Q9H999 370 aa22.09■■□□□ 1.13
DDX11-222ENST00000542777 UTRNP46939 3433 aa22.09■■□□□ 1.13
DDX11-222ENST00000542777 PHKG2P15735 406 aa22.08■■□□□ 1.13
DDX11-222ENST00000542777 C4BP0C0L5 1744 aa22.08■■□□□ 1.12
DDX11-222ENST00000542777 TMOD3Q9NYL9 352 aa22.07■■□□□ 1.12
DDX11-222ENST00000542777 CCER1Q8TC90 406 aaPredicted RBP22.06■■□□□ 1.12
DDX11-222ENST00000542777 LOC102724428A0A0B4J2F2 783 aa22.05■■□□□ 1.12
DDX11-222ENST00000542777 SIK1P57059 783 aa22.05■■□□□ 1.12
DDX11-222ENST00000542777 ASAP1Q9ULH1 1129 aa22.04■■□□□ 1.12
DDX11-222ENST00000542777 UBR3Q6ZT12 1888 aa22.03■■□□□ 1.12
DDX11-222ENST00000542777 PHF14O94880 888 aa22.03■■□□□ 1.12
DDX11-222ENST00000542777 SMIM5Q71RC9 77 aa22.03■■□□□ 1.12
DDX11-222ENST00000542777 AMIGO3Q86WK7 504 aa22.03■■□□□ 1.12
DDX11-222ENST00000542777 LINC00116Q8NCU8 138 aa22.03■■□□□ 1.12
DDX11-222ENST00000542777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.02■■□□□ 1.12
DDX11-222ENST00000542777 CD2APQ9Y5K6 639 aa22.02■■□□□ 1.12
DDX11-222ENST00000542777 IGSF1Q8N6C5 1336 aa22.02■■□□□ 1.12
DDX11-222ENST00000542777 YBX3P16989 372 aaKnown RBP eCLIP22.01■■□□□ 1.11
DDX11-222ENST00000542777 ATP6V1AP38606 617 aa22.01■■□□□ 1.11
DDX11-222ENST00000542777 PLEKHG2Q9H7P9 1386 aa22■■□□□ 1.11
DDX11-222ENST00000542777 GRIN3BO60391 1043 aa22■■□□□ 1.11
DDX11-222ENST00000542777 SSFA2P28290 1259 aa22■■□□□ 1.11
DDX11-222ENST00000542777 ITPK1Q13572 414 aa22■■□□□ 1.11
DDX11-222ENST00000542777 MORC1Q86VD1 984 aa22■■□□□ 1.11
DDX11-222ENST00000542777 ATG3Q9NT62 314 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms