RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 MTFR1LQ9H019 292 aa15.7■□□□□ 0.1
VTN-203ENST00000542029 EMILIN1Q9Y6C2 1016 aa15.7■□□□□ 0.1
VTN-203ENST00000542029 SBF2Q86WG5 1849 aa15.7■□□□□ 0.1
VTN-203ENST00000542029 FAM208AQ9UK61 1670 aaKnown RBP15.7■□□□□ 0.1
VTN-203ENST00000542029 WASHC2AQ641Q2 1341 aa15.69■□□□□ 0.1
VTN-203ENST00000542029 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
VTN-203ENST00000542029 ZBTB7AO95365 584 aa15.69■□□□□ 0.1
VTN-203ENST00000542029 USHBP1Q8N6Y0 703 aa15.69■□□□□ 0.1
VTN-203ENST00000542029 PCDH11XQ9BZA7 1347 aa15.68■□□□□ 0.1
VTN-203ENST00000542029 PCDH11YQ9BZA8 1340 aa15.68■□□□□ 0.1
VTN-203ENST00000542029 MEGF6O75095 1541 aa15.68■□□□□ 0.1
VTN-203ENST00000542029 NHSQ6T4R5 1651 aa15.67■□□□□ 0.1
VTN-203ENST00000542029 LRRC4BQ9NT99 713 aa15.67■□□□□ 0.1
VTN-203ENST00000542029 SLC16A10Q8TF71 515 aa15.66■□□□□ 0.1
VTN-203ENST00000542029 PDGFDQ9GZP0 370 aaPredicted RBP15.66■□□□□ 0.1
VTN-203ENST00000542029 POLKQ9UBT6 870 aa15.66■□□□□ 0.1
VTN-203ENST00000542029 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
VTN-203ENST00000542029 PTGER2P43116 358 aa15.65■□□□□ 0.1
VTN-203ENST00000542029 PANK3Q9H999 370 aa15.65■□□□□ 0.1
VTN-203ENST00000542029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.65■□□□□ 0.1
VTN-203ENST00000542029 SPG7Q9UQ90 795 aa15.65■□□□□ 0.1
VTN-203ENST00000542029 NSD2O96028 1365 aa15.64■□□□□ 0.09
VTN-203ENST00000542029 ZNF827Q17R98 1081 aa15.64■□□□□ 0.09
VTN-203ENST00000542029 AKT1S1Q96B36 256 aa15.64■□□□□ 0.09
VTN-203ENST00000542029 TFCP2L1Q9NZI6 479 aa15.63■□□□□ 0.09
VTN-203ENST00000542029 CCNL1Q9UK58 526 aaPredicted RBP15.63■□□□□ 0.09
VTN-203ENST00000542029 CYP27B1O15528 508 aa15.62■□□□□ 0.09
VTN-203ENST00000542029 SMARCC1Q92922 1105 aaPredicted RBP15.62■□□□□ 0.09
VTN-203ENST00000542029 EYA1Q99502 592 aa15.62■□□□□ 0.09
VTN-203ENST00000542029 PLEKHG2Q9H7P9 1386 aa15.62■□□□□ 0.09
VTN-203ENST00000542029 NKX1-1Q15270 411 aaPredicted RBP15.61■□□□□ 0.09
VTN-203ENST00000542029 SGIP1Q9BQI5 828 aa15.61■□□□□ 0.09
VTN-203ENST00000542029 KNSTRNQ9Y448 316 aa15.61■□□□□ 0.09
VTN-203ENST00000542029 NCAPD2Q15021 1401 aa15.6■□□□□ 0.09
VTN-203ENST00000542029 TNNT2P45379 298 aaPredicted RBP15.6■□□□□ 0.09
VTN-203ENST00000542029 ARXQ96QS3 562 aa15.6■□□□□ 0.09
VTN-203ENST00000542029 POLD1P28340 1107 aa15.59■□□□□ 0.09
VTN-203ENST00000542029 EIF4A2Q14240 407 aaKnown RBP15.59■□□□□ 0.09
VTN-203ENST00000542029 MPRIPQ6WCQ1 1025 aa15.59■□□□□ 0.09
VTN-203ENST00000542029 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
VTN-203ENST00000542029 SYT17Q9BSW7 474 aa15.59■□□□□ 0.09
VTN-203ENST00000542029 MYOM1P52179 1685 aa15.59■□□□□ 0.09
VTN-203ENST00000542029 KAT6BQ8WYB5 2073 aa15.59■□□□□ 0.09
VTN-203ENST00000542029 CASZ1Q86V15 1759 aa15.58■□□□□ 0.08
VTN-203ENST00000542029 IFNL2Q8IZJ0 200 aa15.58■□□□□ 0.08
VTN-203ENST00000542029 FHDC1Q9C0D6 1143 aaPredicted RBP15.58■□□□□ 0.08
VTN-203ENST00000542029 KIF20BQ96Q89 1820 aa15.58■□□□□ 0.08
VTN-203ENST00000542029 BTAF1O14981 1849 aa15.57■□□□□ 0.08
VTN-203ENST00000542029 KCNQ4P56696 695 aa15.57■□□□□ 0.08
VTN-203ENST00000542029 FLAD1Q8NFF5 587 aa15.57■□□□□ 0.08
VTN-203ENST00000542029 PNPLA7Q6ZV29 1317 aa15.57■□□□□ 0.08
VTN-203ENST00000542029 PALLDQ8WX93 1383 aa15.57■□□□□ 0.08
VTN-203ENST00000542029 PAPPAQ13219 1627 aa15.57■□□□□ 0.08
VTN-203ENST00000542029 YY1P25490 414 aa15.56■□□□□ 0.08
VTN-203ENST00000542029 MAP3K5Q99683 1374 aa15.56■□□□□ 0.08
VTN-203ENST00000542029 IGSF1Q8N6C5 1336 aa15.55■□□□□ 0.08
VTN-203ENST00000542029 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
VTN-203ENST00000542029 PHKG2P15735 406 aa15.55■□□□□ 0.08
VTN-203ENST00000542029 TMOD3Q9NYL9 352 aa15.55■□□□□ 0.08
VTN-203ENST00000542029 AMOTQ4VCS5 1084 aa15.54■□□□□ 0.08
VTN-203ENST00000542029 PLEKHO1Q53GL0 409 aaPredicted RBP15.54■□□□□ 0.08
VTN-203ENST00000542029 PIGBQ92521 554 aa15.54■□□□□ 0.08
VTN-203ENST00000542029 KIF7Q2M1P5 1343 aa15.52■□□□□ 0.08
VTN-203ENST00000542029 MSH5O43196 834 aa15.52■□□□□ 0.08
VTN-203ENST00000542029 ERVV-2B6SEH9 535 aa15.51■□□□□ 0.07
VTN-203ENST00000542029 AMER1Q5JTC6 1135 aaPredicted RBP15.51■□□□□ 0.07
VTN-203ENST00000542029 COL23A1Q86Y22 540 aaPredicted RBP15.51■□□□□ 0.07
VTN-203ENST00000542029 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
VTN-203ENST00000542029 AK7Q96M32 723 aa15.51■□□□□ 0.07
VTN-203ENST00000542029 RGPD2P0DJD1 1756 aa15.51■□□□□ 0.07
VTN-203ENST00000542029 LOC102724428A0A0B4J2F2 783 aa15.5■□□□□ 0.07
VTN-203ENST00000542029 SIK1P57059 783 aa15.5■□□□□ 0.07
VTN-203ENST00000542029 DOT1LQ8TEK3 1739 aa15.5■□□□□ 0.07
VTN-203ENST00000542029 SHANK3Q9BYB0 1731 aa15.49■□□□□ 0.07
VTN-203ENST00000542029 ANKRD26Q9UPS8 1709 aa15.49■□□□□ 0.07
VTN-203ENST00000542029 ZNF530Q6P9A1 599 aaPredicted RBP15.48■□□□□ 0.07
VTN-203ENST00000542029 SSFA2P28290 1259 aa15.47■□□□□ 0.07
VTN-203ENST00000542029 C1orf141Q5JVX7 400 aa15.47■□□□□ 0.07
VTN-203ENST00000542029 KLHL34Q8N239 644 aa15.47■□□□□ 0.07
VTN-203ENST00000542029 ASAP1Q9ULH1 1129 aa15.47■□□□□ 0.07
VTN-203ENST00000542029 PER1O15534 1290 aaPredicted RBP15.46■□□□□ 0.07
VTN-203ENST00000542029 IL13P35225 146 aa15.46■□□□□ 0.07
VTN-203ENST00000542029 ATP6V1AP38606 617 aa15.46■□□□□ 0.07
VTN-203ENST00000542029 MTHFSP49914 203 aa15.46■□□□□ 0.07
VTN-203ENST00000542029 CABP4P57796 275 aa15.46■□□□□ 0.07
VTN-203ENST00000542029 GPR162Q16538 588 aa15.46■□□□□ 0.07
VTN-203ENST00000542029 SULT6B1Q6IMI4 303 aa15.46■□□□□ 0.07
VTN-203ENST00000542029 ATG3Q9NT62 314 aa15.46■□□□□ 0.07
VTN-203ENST00000542029 LY75O60449 1722 aa15.46■□□□□ 0.06
VTN-203ENST00000542029 PKD1L3Q7Z443 1732 aa15.46■□□□□ 0.06
VTN-203ENST00000542029 KDRP35968 1356 aa15.45■□□□□ 0.06
VTN-203ENST00000542029 MAP2P11137 1827 aaKnown RBP15.45■□□□□ 0.06
VTN-203ENST00000542029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.44■□□□□ 0.06
VTN-203ENST00000542029 AEBP1Q8IUX7 1158 aa15.44■□□□□ 0.06
VTN-203ENST00000542029 CD2APQ9Y5K6 639 aa15.44■□□□□ 0.06
VTN-203ENST00000542029 NPC1L1Q9UHC9 1359 aa15.44■□□□□ 0.06
VTN-203ENST00000542029 MSL1Q68DK7 614 aa15.43■□□□□ 0.06
VTN-203ENST00000542029 LINC00116Q8NCU8 138 aa15.43■□□□□ 0.06
VTN-203ENST00000542029 GNPATO15228 680 aa15.42■□□□□ 0.06
VTN-203ENST00000542029 PHF14O94880 888 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms