RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 SMARCA5O60264 1052 aaPredicted RBP16.69■□□□□ 0.26
NPIPA1-206ENST00000541836 FBLN1P23142 703 aa16.69■□□□□ 0.26
NPIPA1-206ENST00000541836 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
NPIPA1-206ENST00000541836 TSC1Q92574 1164 aa16.69■□□□□ 0.26
NPIPA1-206ENST00000541836 PNPLA6Q8IY17 1366 aa16.69■□□□□ 0.26
NPIPA1-206ENST00000541836 NEK4P51957 841 aa16.69■□□□□ 0.26
NPIPA1-206ENST00000541836 C8orf58Q8NAV2 365 aa16.69■□□□□ 0.26
NPIPA1-206ENST00000541836 POGZQ7Z3K3 1410 aa16.68■□□□□ 0.26
NPIPA1-206ENST00000541836 RPGRIP1LQ68CZ1 1315 aa16.68■□□□□ 0.26
NPIPA1-206ENST00000541836 MYRIPQ8NFW9 859 aa16.68■□□□□ 0.26
NPIPA1-206ENST00000541836 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
NPIPA1-206ENST00000541836 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
NPIPA1-206ENST00000541836 TMX3Q96JJ7 454 aa16.68■□□□□ 0.26
NPIPA1-206ENST00000541836 IFT57Q9NWB7 429 aa16.68■□□□□ 0.26
NPIPA1-206ENST00000541836 FAM135BQ49AJ0 1406 aa16.67■□□□□ 0.26
NPIPA1-206ENST00000541836 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
NPIPA1-206ENST00000541836 ZNF830Q96NB3 372 aaPredicted RBP16.67■□□□□ 0.26
NPIPA1-206ENST00000541836 ERC2O15083 957 aa16.67■□□□□ 0.26
NPIPA1-206ENST00000541836 FRMPD1Q5SYB0 1578 aa16.67■□□□□ 0.26
NPIPA1-206ENST00000541836 MINK1Q8N4C8 1332 aaPredicted RBP16.66■□□□□ 0.26
NPIPA1-206ENST00000541836 KNDC1Q76NI1 1749 aa16.66■□□□□ 0.26
NPIPA1-206ENST00000541836 ANKRD44Q8N8A2 993 aa16.66■□□□□ 0.26
NPIPA1-206ENST00000541836 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
NPIPA1-206ENST00000541836 VGFO15240 615 aaPredicted RBP16.65■□□□□ 0.26
NPIPA1-206ENST00000541836 BRD1O95696 1058 aa16.65■□□□□ 0.26
NPIPA1-206ENST00000541836 NOL8Q76FK4 1167 aaKnown RBP16.65■□□□□ 0.26
NPIPA1-206ENST00000541836 GDPD2Q9HCC8 539 aa16.65■□□□□ 0.26
NPIPA1-206ENST00000541836 A0A0U1RQG5 324 aaPredicted RBP16.64■□□□□ 0.25
NPIPA1-206ENST00000541836 ZNF853P0CG23 659 aa16.64■□□□□ 0.25
NPIPA1-206ENST00000541836 LMTK2Q8IWU2 1503 aa16.64■□□□□ 0.25
NPIPA1-206ENST00000541836 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
NPIPA1-206ENST00000541836 DMTNQ08495 405 aa16.63■□□□□ 0.25
NPIPA1-206ENST00000541836 CEP85Q6P2H3 762 aa16.63■□□□□ 0.25
NPIPA1-206ENST00000541836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
NPIPA1-206ENST00000541836 ZNF710Q8N1W2 664 aa16.63■□□□□ 0.25
NPIPA1-206ENST00000541836 C17orf53Q8N3J3 647 aaPredicted RBP16.63■□□□□ 0.25
NPIPA1-206ENST00000541836 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
NPIPA1-206ENST00000541836 USP25Q9UHP3 1055 aa16.63■□□□□ 0.25
NPIPA1-206ENST00000541836 CAMSAP1Q5T5Y3 1602 aa16.63■□□□□ 0.25
NPIPA1-206ENST00000541836 FAM177BA6PVY3 158 aa16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 ZSCAN20P17040 1043 aaPredicted RBP16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 NOLC1Q14978 699 aaKnown RBP eCLIP16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 PIBF1Q8WXW3 757 aa16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 GADD45BO75293 160 aaPredicted RBP16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 PHF14O94880 888 aa16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 HMGN5P82970 282 aaKnown RBP16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 RPAP2Q8IXW5 612 aaPredicted RBP16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 TTC12Q9H892 705 aaPredicted RBP16.62■□□□□ 0.25
NPIPA1-206ENST00000541836 CBX1P83916 185 aa16.61■□□□□ 0.25
NPIPA1-206ENST00000541836 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
NPIPA1-206ENST00000541836 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
NPIPA1-206ENST00000541836 MLH3Q9UHC1 1453 aa16.61■□□□□ 0.25
NPIPA1-206ENST00000541836 FAM83GA6ND36 823 aa16.61■□□□□ 0.25
NPIPA1-206ENST00000541836 TPRNQ4KMQ1 711 aa16.61■□□□□ 0.25
NPIPA1-206ENST00000541836 KIF24Q5T7B8 1368 aa16.6■□□□□ 0.25
NPIPA1-206ENST00000541836 SIGLEC1Q9BZZ2 1709 aa16.6■□□□□ 0.25
NPIPA1-206ENST00000541836 ANKRD26Q9UPS8 1709 aa16.6■□□□□ 0.25
NPIPA1-206ENST00000541836 UTP14CQ5TAP6 766 aaKnown RBP16.6■□□□□ 0.25
NPIPA1-206ENST00000541836 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
NPIPA1-206ENST00000541836 MCM2P49736 904 aa16.6■□□□□ 0.25
NPIPA1-206ENST00000541836 FAM69CQ0P6D2 419 aa16.6■□□□□ 0.25
NPIPA1-206ENST00000541836 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
NPIPA1-206ENST00000541836 PRAM1Q96QH2 718 aa16.6■□□□□ 0.25
NPIPA1-206ENST00000541836 HECW2Q9P2P5 1572 aa16.59■□□□□ 0.25
NPIPA1-206ENST00000541836 CUL4AQ13619 759 aa16.59■□□□□ 0.25
NPIPA1-206ENST00000541836 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
NPIPA1-206ENST00000541836 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
NPIPA1-206ENST00000541836 KIF3AQ9Y496 699 aa16.59■□□□□ 0.25
NPIPA1-206ENST00000541836 YEATS2Q9ULM3 1422 aa16.59■□□□□ 0.25
NPIPA1-206ENST00000541836 CDC42BPGQ6DT37 1551 aa16.59■□□□□ 0.25
NPIPA1-206ENST00000541836 ADCY5O95622 1261 aa16.58■□□□□ 0.25
NPIPA1-206ENST00000541836 USP48Q86UV5 1035 aa16.58■□□□□ 0.25
NPIPA1-206ENST00000541836 MEIS3Q99687 375 aa16.58■□□□□ 0.25
NPIPA1-206ENST00000541836 PALD1Q9ULE6 856 aa16.58■□□□□ 0.25
NPIPA1-206ENST00000541836 ABCC3O15438 1527 aa16.58■□□□□ 0.24
NPIPA1-206ENST00000541836 PPP4R3BQ5MIZ7 849 aa16.58■□□□□ 0.24
NPIPA1-206ENST00000541836 GTF2F1P35269 517 aaKnown RBP eCLIP16.57■□□□□ 0.241e-12■■■■■ 90.4
NPIPA1-206ENST00000541836 TSHZ3Q63HK5 1081 aa16.57■□□□□ 0.24
NPIPA1-206ENST00000541836 EMILIN1Q9Y6C2 1016 aa16.57■□□□□ 0.24
NPIPA1-206ENST00000541836 RTL1A6NKG5 1358 aa16.57■□□□□ 0.24
NPIPA1-206ENST00000541836 MSH6P52701 1360 aa16.57■□□□□ 0.24
NPIPA1-206ENST00000541836 IDI1Q13907 227 aa16.57■□□□□ 0.24
NPIPA1-206ENST00000541836 UVSSAQ2YD98 709 aa16.57■□□□□ 0.24
NPIPA1-206ENST00000541836 HCLS1P14317 486 aaPredicted RBP16.56■□□□□ 0.24
NPIPA1-206ENST00000541836 PDE1AP54750 535 aa16.56■□□□□ 0.24
NPIPA1-206ENST00000541836 LMOD3Q0VAK6 560 aa16.56■□□□□ 0.24
NPIPA1-206ENST00000541836 INTS4Q96HW7 963 aaKnown RBP16.56■□□□□ 0.24
NPIPA1-206ENST00000541836 MCCP23508 829 aa16.56■□□□□ 0.24
NPIPA1-206ENST00000541836 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
NPIPA1-206ENST00000541836 UPF3BQ9BZI7 483 aaKnown RBP16.56■□□□□ 0.24
NPIPA1-206ENST00000541836 ATP2B3Q16720 1220 aa16.55■□□□□ 0.24
NPIPA1-206ENST00000541836 CDK19Q9BWU1 502 aa16.55■□□□□ 0.24
NPIPA1-206ENST00000541836 ANO2Q9NQ90 1003 aa16.55■□□□□ 0.24
NPIPA1-206ENST00000541836 RIMS2Q9UQ26 1411 aa16.55■□□□□ 0.24
NPIPA1-206ENST00000541836 FKBP5Q13451 457 aaPredicted RBP16.55■□□□□ 0.24
NPIPA1-206ENST00000541836 ESYT1Q9BSJ8 1104 aa16.55■□□□□ 0.24
NPIPA1-206ENST00000541836 NEO1Q92859 1461 aa16.55■□□□□ 0.24
NPIPA1-206ENST00000541836 BCL2L12Q9HB09 334 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms