RNA–Protein interactions for RNA: ENST00000541588.5

RAB6A-207, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB6A, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-207ENST00000541588 SLC24A1O60721 1099 aa25.63■■□□□ 1.69
RAB6A-207ENST00000541588 ZCRB1Q8TBF4 217 aaKnown RBP25.63■■□□□ 1.69
RAB6A-207ENST00000541588 SLC16A10Q8TF71 515 aa25.63■■□□□ 1.69
RAB6A-207ENST00000541588 TFCP2L1Q9NZI6 479 aa25.63■■□□□ 1.69
RAB6A-207ENST00000541588 MEGF6O75095 1541 aa25.63■■□□□ 1.69
RAB6A-207ENST00000541588 PNPLA7Q6ZV29 1317 aa25.63■■□□□ 1.69
RAB6A-207ENST00000541588 KLHL34Q8N239 644 aa25.62■■□□□ 1.69
RAB6A-207ENST00000541588 TUBGCP6Q96RT7 1819 aa25.62■■□□□ 1.69
RAB6A-207ENST00000541588 RRS1Q15050 365 aaKnown RBP25.61■■□□□ 1.69
RAB6A-207ENST00000541588 LY75O60449 1722 aa25.6■■□□□ 1.69
RAB6A-207ENST00000541588 NSD2O96028 1365 aa25.6■■□□□ 1.69
RAB6A-207ENST00000541588 POLD1P28340 1107 aa25.6■■□□□ 1.69
RAB6A-207ENST00000541588 RTL1A6NKG5 1358 aa25.59■■□□□ 1.69
RAB6A-207ENST00000541588 GGNBP2Q9H3C7 697 aa25.59■■□□□ 1.69
RAB6A-207ENST00000541588 GPR162Q16538 588 aa25.58■■□□□ 1.69
RAB6A-207ENST00000541588 NBPF6Q5VWK0 638 aa25.58■■□□□ 1.69
RAB6A-207ENST00000541588 USHBP1Q8N6Y0 703 aa25.58■■□□□ 1.69
RAB6A-207ENST00000541588 NBPF4Q96M43 638 aa25.58■■□□□ 1.69
RAB6A-207ENST00000541588 COL24A1Q17RW2 1714 aa25.57■■□□□ 1.68
RAB6A-207ENST00000541588 FYB1O15117 783 aa25.57■■□□□ 1.68
RAB6A-207ENST00000541588 CCNL1Q9UK58 526 aaPredicted RBP25.57■■□□□ 1.68
RAB6A-207ENST00000541588 TMF1P82094 1093 aa25.55■■□□□ 1.68
RAB6A-207ENST00000541588 RAPGEF4Q8WZA2 1011 aa25.54■■□□□ 1.68
RAB6A-207ENST00000541588 GOLGB1Q14789 3259 aaKnown RBP25.54■■□□□ 1.68
RAB6A-207ENST00000541588 USP47Q96K76 1375 aa25.54■■□□□ 1.68
RAB6A-207ENST00000541588 SMG6Q86US8 1419 aaKnown RBP25.54■■□□□ 1.68
RAB6A-207ENST00000541588 PELP1Q8IZL8 1130 aaKnown RBP25.53■■□□□ 1.68
RAB6A-207ENST00000541588 CGNL1Q0VF96 1302 aa25.53■■□□□ 1.68
RAB6A-207ENST00000541588 MSH5O43196 834 aa25.52■■□□□ 1.68
RAB6A-207ENST00000541588 TATP17735 454 aaPredicted RBP25.5■■□□□ 1.67
RAB6A-207ENST00000541588 HSP90AB2PQ58FF8 381 aa25.5■■□□□ 1.67
RAB6A-207ENST00000541588 NLGN2Q8NFZ4 835 aa25.5■■□□□ 1.67
RAB6A-207ENST00000541588 KIF20BQ96Q89 1820 aa25.5■■□□□ 1.67
RAB6A-207ENST00000541588 INSRP06213 1382 aa25.48■■□□□ 1.67
RAB6A-207ENST00000541588 COL23A1Q86Y22 540 aaPredicted RBP25.48■■□□□ 1.67
RAB6A-207ENST00000541588 FLT4P35916 1363 aa25.46■■□□□ 1.67
RAB6A-207ENST00000541588 PCDH11XQ9BZA7 1347 aa25.46■■□□□ 1.67
RAB6A-207ENST00000541588 PCDH11YQ9BZA8 1340 aa25.46■■□□□ 1.67
RAB6A-207ENST00000541588 C1QTNF8P60827 252 aa25.44■■□□□ 1.66
RAB6A-207ENST00000541588 CDCA8Q53HL2 280 aa25.44■■□□□ 1.66
RAB6A-207ENST00000541588 MSL1Q68DK7 614 aa25.44■■□□□ 1.66
RAB6A-207ENST00000541588 C5P01031 1676 aa25.44■■□□□ 1.66
RAB6A-207ENST00000541588 MPRIPQ6WCQ1 1025 aa25.43■■□□□ 1.66
RAB6A-207ENST00000541588 KIF24Q5T7B8 1368 aa25.42■■□□□ 1.66
RAB6A-207ENST00000541588 PALLDQ8WX93 1383 aa25.42■■□□□ 1.66
RAB6A-207ENST00000541588 SENP3-EIF4A1A0A087X0R7 540 aa25.41■■□□□ 1.66
RAB6A-207ENST00000541588 CYP27B1O15528 508 aa25.41■■□□□ 1.66
RAB6A-207ENST00000541588 TAF1LQ8IZX4 1826 aa25.41■■□□□ 1.66
RAB6A-207ENST00000541588 CARD14Q9BXL6 1004 aa25.4■■□□□ 1.66
RAB6A-207ENST00000541588 EMILIN1Q9Y6C2 1016 aa25.4■■□□□ 1.66
RAB6A-207ENST00000541588 ITGB4P16144 1822 aa25.4■■□□□ 1.66
RAB6A-207ENST00000541588 YBX3P16989 372 aaKnown RBP eCLIP25.39■■□□□ 1.66
RAB6A-207ENST00000541588 NSD3Q9BZ95 1437 aa25.38■■□□□ 1.65
RAB6A-207ENST00000541588 TOGARAM1Q9Y4F4 1720 aa25.38■■□□□ 1.65
RAB6A-207ENST00000541588 PPM1GO15355 546 aaPredicted RBP25.37■■□□□ 1.65
RAB6A-207ENST00000541588 HMGB2P26583 209 aaKnown RBP25.37■■□□□ 1.65
RAB6A-207ENST00000541588 GRIN3BO60391 1043 aa25.36■■□□□ 1.65
RAB6A-207ENST00000541588 FLAD1Q8NFF5 587 aa25.36■■□□□ 1.65
RAB6A-207ENST00000541588 PKD1L3Q7Z443 1732 aa25.36■■□□□ 1.65
RAB6A-207ENST00000541588 GIGYF1O75420 1035 aaPredicted RBP25.35■■□□□ 1.65
RAB6A-207ENST00000541588 SMARCC1Q92922 1105 aaPredicted RBP25.35■■□□□ 1.65
RAB6A-207ENST00000541588 C4BP0C0L5 1744 aa25.34■■□□□ 1.65
RAB6A-207ENST00000541588 AK7Q96M32 723 aa25.33■■□□□ 1.65
RAB6A-207ENST00000541588 PIGBQ92521 554 aa25.32■■□□□ 1.64
RAB6A-207ENST00000541588 NCAPD2Q15021 1401 aa25.31■■□□□ 1.64
RAB6A-207ENST00000541588 MAP2P11137 1827 aaKnown RBP25.31■■□□□ 1.64
RAB6A-207ENST00000541588 SPG7Q9UQ90 795 aa25.31■■□□□ 1.64
RAB6A-207ENST00000541588 CD2APQ9Y5K6 639 aa25.31■■□□□ 1.64
RAB6A-207ENST00000541588 ANKRD26Q9UPS8 1709 aa25.3■■□□□ 1.64
RAB6A-207ENST00000541588 NKX1-1Q15270 411 aaPredicted RBP25.3■■□□□ 1.64
RAB6A-207ENST00000541588 AMIGO3Q86WK7 504 aa25.3■■□□□ 1.64
RAB6A-207ENST00000541588 PHF14O94880 888 aa25.29■■□□□ 1.64
RAB6A-207ENST00000541588 TRIM26Q12899 539 aaPredicted RBP25.29■■□□□ 1.64
RAB6A-207ENST00000541588 SMIM5Q71RC9 77 aa25.29■■□□□ 1.64
RAB6A-207ENST00000541588 UBR3Q6ZT12 1888 aa25.29■■□□□ 1.64
RAB6A-207ENST00000541588 WASHC2AQ641Q2 1341 aa25.29■■□□□ 1.64
RAB6A-207ENST00000541588 EYA1Q99502 592 aa25.28■■□□□ 1.64
RAB6A-207ENST00000541588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.26■■□□□ 1.63
RAB6A-207ENST00000541588 LOC102724428A0A0B4J2F2 783 aa25.25■■□□□ 1.63
RAB6A-207ENST00000541588 SIK1P57059 783 aa25.25■■□□□ 1.63
RAB6A-207ENST00000541588 TMOD3Q9NYL9 352 aa25.25■■□□□ 1.63
RAB6A-207ENST00000541588 LINC00116Q8NCU8 138 aa25.24■■□□□ 1.63
RAB6A-207ENST00000541588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.24■■□□□ 1.635e-7■□□□□ 10.6
RAB6A-207ENST00000541588 POLR3GLQ9BT43 218 aa25.23■■□□□ 1.63
RAB6A-207ENST00000541588 POLKQ9UBT6 870 aa25.23■■□□□ 1.63
RAB6A-207ENST00000541588 ASAP1Q9ULH1 1129 aa25.23■■□□□ 1.63
RAB6A-207ENST00000541588 SSFA2P28290 1259 aa25.22■■□□□ 1.63
RAB6A-207ENST00000541588 ATP10DQ9P241 1426 aa25.21■■□□□ 1.63
RAB6A-207ENST00000541588 PHKG2P15735 406 aa25.21■■□□□ 1.63
RAB6A-207ENST00000541588 TNNT2P45379 298 aaPredicted RBP25.21■■□□□ 1.63
RAB6A-207ENST00000541588 IFNL2Q8IZJ0 200 aa25.21■■□□□ 1.63
RAB6A-207ENST00000541588 WWC3Q9ULE0 1092 aa25.21■■□□□ 1.63
RAB6A-207ENST00000541588 CEP350Q5VT06 3117 aa25.21■■□□□ 1.63
RAB6A-207ENST00000541588 ITPK1Q13572 414 aa25.2■■□□□ 1.62
RAB6A-207ENST00000541588 IGSF1Q8N6C5 1336 aa25.19■■□□□ 1.62
RAB6A-207ENST00000541588 GNPATO15228 680 aa25.19■■□□□ 1.62
RAB6A-207ENST00000541588 ATP6V1AP38606 617 aa25.19■■□□□ 1.62
RAB6A-207ENST00000541588 EIF4A2Q14240 407 aaKnown RBP25.18■■□□□ 1.62
RAB6A-207ENST00000541588 TIMELESSQ9UNS1 1208 aa25.18■■□□□ 1.62
RAB6A-207ENST00000541588 ATG3Q9NT62 314 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms