RNA–Protein interactions for RNA: ENST00000541573.5

SOD2-213, Transcript of superoxide dismutase 2, humanhuman

TSL 4

Gene SOD2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-213ENST00000541573 FCF1Q9Y324 198 aaKnown RBP9.64□□□□□ -0.87
SOD2-213ENST00000541573 SCRIBQ14160 1630 aa9.64□□□□□ -0.87
SOD2-213ENST00000541573 MYO15BQ96JP2 1530 aa9.63□□□□□ -0.87
SOD2-213ENST00000541573 SOWAHDA6NJG2 315 aa9.63□□□□□ -0.87
SOD2-213ENST00000541573 SFI1A8K8P3 1242 aa9.63□□□□□ -0.87
SOD2-213ENST00000541573 SEC13P55735 322 aa9.63□□□□□ -0.87
SOD2-213ENST00000541573 PCDHGA11Q9Y5H2 935 aa9.63□□□□□ -0.87
SOD2-213ENST00000541573 RNF20Q5VTR2 975 aa9.62□□□□□ -0.87
SOD2-213ENST00000541573 TPCN2Q8NHX9 752 aa9.62□□□□□ -0.87
SOD2-213ENST00000541573 SLC10A4Q96EP9 437 aa9.62□□□□□ -0.87
SOD2-213ENST00000541573 PCDHB11Q9Y5F2 797 aa9.62□□□□□ -0.87
SOD2-213ENST00000541573 PSME1Q06323 249 aa9.61□□□□□ -0.87
SOD2-213ENST00000541573 RBM19Q9Y4C8 960 aaKnown RBP9.61□□□□□ -0.87
SOD2-213ENST00000541573 SH3BP2P78314 561 aa9.6□□□□□ -0.87
SOD2-213ENST00000541573 USP4Q13107 963 aa9.6□□□□□ -0.87
SOD2-213ENST00000541573 SMARCA2P51531 1590 aa9.59□□□□□ -0.87
SOD2-213ENST00000541573 ESPNB1AK53 854 aa9.59□□□□□ -0.87
SOD2-213ENST00000541573 RAB15P59190 212 aa9.59□□□□□ -0.87
SOD2-213ENST00000541573 OCLNQ16625 522 aa9.59□□□□□ -0.87
SOD2-213ENST00000541573 HINFPQ9BQA5 517 aa9.59□□□□□ -0.87
SOD2-213ENST00000541573 C1QTNF2Q9BXJ5 285 aa9.59□□□□□ -0.87
SOD2-213ENST00000541573 PPEF1O14829 653 aaPredicted RBP9.58□□□□□ -0.88
SOD2-213ENST00000541573 NBPF20Q3BBV1 942 aa9.58□□□□□ -0.88
SOD2-213ENST00000541573 NOM1Q5C9Z4 860 aaKnown RBP9.58□□□□□ -0.88
SOD2-213ENST00000541573 DNAJC14Q6Y2X3 702 aaPredicted RBP9.58□□□□□ -0.88
SOD2-213ENST00000541573 C1orf216Q8TAB5 229 aa9.58□□□□□ -0.88
SOD2-213ENST00000541573 CXXC1Q9P0U4 656 aaPredicted RBP9.58□□□□□ -0.88
SOD2-213ENST00000541573 BIN2Q9UBW5 565 aaPredicted RBP9.58□□□□□ -0.88
SOD2-213ENST00000541573 ARHGEF11O15085 1522 aa9.57□□□□□ -0.88
SOD2-213ENST00000541573 UNCXA6NJT0 531 aa9.57□□□□□ -0.88
SOD2-213ENST00000541573 ABL1P00519 1130 aa9.57□□□□□ -0.88
SOD2-213ENST00000541573 TAS1R3Q7RTX0 852 aa9.57□□□□□ -0.88
SOD2-213ENST00000541573 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
SOD2-213ENST00000541573 ANO2Q9NQ90 1003 aa9.57□□□□□ -0.88
SOD2-213ENST00000541573 MARSP56192 900 aaKnown RBP9.55□□□□□ -0.88
SOD2-213ENST00000541573 TRMT44Q8IYL2 757 aaKnown RBP9.55□□□□□ -0.88
SOD2-213ENST00000541573 TSEN2Q8NCE0 465 aaKnown RBP9.55□□□□□ -0.88
SOD2-213ENST00000541573 GAS2L2Q8NHY3 880 aa9.55□□□□□ -0.88
SOD2-213ENST00000541573 KCTD15Q96SI1 283 aaPredicted RBP9.55□□□□□ -0.88
SOD2-213ENST00000541573 RBM47A0AV96 593 aaKnown RBP9.54□□□□□ -0.88
SOD2-213ENST00000541573 ZNF211Q13398 564 aaPredicted RBP9.54□□□□□ -0.88
SOD2-213ENST00000541573 SEPT12Q8IYM1 358 aa9.54□□□□□ -0.88
SOD2-213ENST00000541573 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.54□□□□□ -0.88
SOD2-213ENST00000541573 PCDH10Q9P2E7 1040 aa9.54□□□□□ -0.88
SOD2-213ENST00000541573 SCTRP47872 440 aa9.53□□□□□ -0.88
SOD2-213ENST00000541573 CAPN12Q6ZSI9 719 aa9.53□□□□□ -0.88
SOD2-213ENST00000541573 MKNK1Q9BUB5 465 aa9.53□□□□□ -0.88
SOD2-213ENST00000541573 SEPT3Q9UH03 358 aa9.53□□□□□ -0.88
SOD2-213ENST00000541573 CDV3Q9UKY7 258 aaKnown RBP9.53□□□□□ -0.88
SOD2-213ENST00000541573 LMTK3Q96Q04 1460 aa9.53□□□□□ -0.88
SOD2-213ENST00000541573 PURBQ96QR8 312 aaKnown RBP9.52□□□□□ -0.89
SOD2-213ENST00000541573 ERVH48-1M5A8F1 160 aa9.51□□□□□ -0.89
SOD2-213ENST00000541573 ZBTB24O43167 697 aaPredicted RBP9.51□□□□□ -0.89
SOD2-213ENST00000541573 MYCP01106 439 aaPredicted RBP9.51□□□□□ -0.89
SOD2-213ENST00000541573 WEE1P30291 646 aa9.51□□□□□ -0.89
SOD2-213ENST00000541573 SKOR1P84550 965 aa9.51□□□□□ -0.89
SOD2-213ENST00000541573 GTF3C2Q8WUA4 911 aaPredicted RBP9.51□□□□□ -0.89
SOD2-213ENST00000541573 H3BRB1 525 aa9.5□□□□□ -0.89
SOD2-213ENST00000541573 ERCC3P19447 782 aa9.5□□□□□ -0.89
SOD2-213ENST00000541573 INTS6LQ5JSJ4 861 aaKnown RBP9.5□□□□□ -0.89
SOD2-213ENST00000541573 PLA2G2CQ5R387 149 aa9.5□□□□□ -0.89
SOD2-213ENST00000541573 VASH1Q7L8A9 365 aaPredicted RBP9.5□□□□□ -0.89
SOD2-213ENST00000541573 CCDC125Q86Z20 511 aa9.5□□□□□ -0.89
SOD2-213ENST00000541573 TUT1Q9H6E5 874 aaKnown RBP9.5□□□□□ -0.89
SOD2-213ENST00000541573 EGFL7Q9UHF1 273 aa9.5□□□□□ -0.89
SOD2-213ENST00000541573 ICMTO60725 284 aa9.49□□□□□ -0.89
SOD2-213ENST00000541573 STAU1O95793 577 aaKnown RBP9.49□□□□□ -0.89
SOD2-213ENST00000541573 TRIM32Q13049 653 aa9.49□□□□□ -0.89
SOD2-213ENST00000541573 FKBP5Q13451 457 aaPredicted RBP9.49□□□□□ -0.89
SOD2-213ENST00000541573 ZNF358Q9NW07 568 aa9.49□□□□□ -0.89
SOD2-213ENST00000541573 DNMT3AQ9Y6K1 912 aaPredicted RBP9.49□□□□□ -0.89
SOD2-213ENST00000541573 ANKRD33BA6NCL7 494 aa9.48□□□□□ -0.89
SOD2-213ENST00000541573 TMEM229AB2RXF0 380 aa9.48□□□□□ -0.89
SOD2-213ENST00000541573 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
SOD2-213ENST00000541573 VARSP26640 1264 aaKnown RBP9.48□□□□□ -0.89
SOD2-213ENST00000541573 MTMR3Q13615 1198 aa9.48□□□□□ -0.89
SOD2-213ENST00000541573 ARID5BQ14865 1188 aa9.48□□□□□ -0.89
SOD2-213ENST00000541573 GLYCTKQ8IVS8 523 aa9.48□□□□□ -0.89
SOD2-213ENST00000541573 M0R2N6 131 aa9.47□□□□□ -0.89
SOD2-213ENST00000541573 NAA30Q147X3 362 aaPredicted RBP9.47□□□□□ -0.89
SOD2-213ENST00000541573 ECM1Q16610 540 aa9.47□□□□□ -0.89
SOD2-213ENST00000541573 BCL2L13Q9BXK5 485 aa9.47□□□□□ -0.89
SOD2-213ENST00000541573 ESF1Q9H501 851 aaKnown RBP9.47□□□□□ -0.89
SOD2-213ENST00000541573 TMPRSS4Q9NRS4 437 aa9.47□□□□□ -0.89
SOD2-213ENST00000541573 KIF21AQ7Z4S6 1674 aa9.46□□□□□ -0.89
SOD2-213ENST00000541573 ZNF16P17020 682 aaPredicted RBP9.46□□□□□ -0.9
SOD2-213ENST00000541573 ERVK-9P63128 1117 aa9.45□□□□□ -0.9
SOD2-213ENST00000541573 FKBP4Q02790 459 aaKnown RBP eCLIP9.45□□□□□ -0.9
SOD2-213ENST00000541573 TNS4Q8IZW8 715 aa9.45□□□□□ -0.9
SOD2-213ENST00000541573 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
SOD2-213ENST00000541573 CYLDQ9NQC7 956 aa9.45□□□□□ -0.9
SOD2-213ENST00000541573 KIAA1522Q9P206 1035 aaPredicted RBP9.45□□□□□ -0.9
SOD2-213ENST00000541573 MAP4K5Q9Y4K4 846 aa9.45□□□□□ -0.9
SOD2-213ENST00000541573 C21orf2O43822 256 aa9.44□□□□□ -0.9
SOD2-213ENST00000541573 WNT7BP56706 349 aa9.44□□□□□ -0.9
SOD2-213ENST00000541573 KCNC4Q03721 635 aa9.44□□□□□ -0.9
SOD2-213ENST00000541573 CC2D2BQ6DHV5 1058 aa9.44□□□□□ -0.9
SOD2-213ENST00000541573 NPAS4Q8IUM7 802 aa9.44□□□□□ -0.9
SOD2-213ENST00000541573 FBXO41Q8TF61 875 aa9.44□□□□□ -0.9
SOD2-213ENST00000541573 GIPC2Q8TF65 315 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms