RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 PPFIBP1Q86W92 1011 aa14.21□□□□□ -0.13
EIF3A-203ENST00000541549 TRMT1Q9NXH9 659 aaKnown RBP14.21□□□□□ -0.13
EIF3A-203ENST00000541549 MAPKBP1O60336 1514 aa14.21□□□□□ -0.14
EIF3A-203ENST00000541549 TNNT1P13805 278 aa14.21□□□□□ -0.14
EIF3A-203ENST00000541549 CDR1P51861 262 aa14.21□□□□□ -0.14
EIF3A-203ENST00000541549 SART3Q15020 963 aaKnown RBP14.21□□□□□ -0.14
EIF3A-203ENST00000541549 TRERF1Q96PN7 1200 aa14.21□□□□□ -0.14
EIF3A-203ENST00000541549 BRMS1Q9HCU9 246 aa14.21□□□□□ -0.14
EIF3A-203ENST00000541549 CFAP100Q494V2 611 aa14.2□□□□□ -0.14
EIF3A-203ENST00000541549 AMOTL1Q8IY63 956 aa14.2□□□□□ -0.14
EIF3A-203ENST00000541549 ZNF830Q96NB3 372 aaPredicted RBP14.2□□□□□ -0.14
EIF3A-203ENST00000541549 SFPQP23246 707 aaKnown RBP eCLIP14.2□□□□□ -0.14
EIF3A-203ENST00000541549 CGNQ9P2M7 1197 aaKnown RBP14.2□□□□□ -0.14
EIF3A-203ENST00000541549 ABCC5O15440 1437 aa14.2□□□□□ -0.14
EIF3A-203ENST00000541549 PPP4R3BQ5MIZ7 849 aa14.2□□□□□ -0.14
EIF3A-203ENST00000541549 TSHZ3Q63HK5 1081 aa14.2□□□□□ -0.14
EIF3A-203ENST00000541549 TFIP11Q9UBB9 837 aaKnown RBP14.2□□□□□ -0.14
EIF3A-203ENST00000541549 KIF18AQ8NI77 898 aa14.19□□□□□ -0.14
EIF3A-203ENST00000541549 TNNQ9UQP3 1299 aa14.19□□□□□ -0.14
EIF3A-203ENST00000541549 RAB11FIP3O75154 756 aa14.19□□□□□ -0.14
EIF3A-203ENST00000541549 EPRSP07814 1512 aaKnown RBP14.19□□□□□ -0.14
EIF3A-203ENST00000541549 DISP3Q9P2K9 1392 aa14.19□□□□□ -0.14
EIF3A-203ENST00000541549 NOL10Q9BSC4 688 aaKnown RBP14.19□□□□□ -0.14
EIF3A-203ENST00000541549 SCAND2PQ9GZW5 306 aaPredicted RBP14.19□□□□□ -0.14
EIF3A-203ENST00000541549 TBC1D2BQ9UPU7 963 aa14.19□□□□□ -0.14
EIF3A-203ENST00000541549 TMCO3Q6UWJ1 677 aa14.18□□□□□ -0.14
EIF3A-203ENST00000541549 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
EIF3A-203ENST00000541549 MCM5P33992 734 aa14.18□□□□□ -0.14
EIF3A-203ENST00000541549 KIF1BPQ96EK5 621 aa14.18□□□□□ -0.14
EIF3A-203ENST00000541549 CLIP2Q9UDT6 1046 aa14.18□□□□□ -0.14
EIF3A-203ENST00000541549 PCF11O94913 1555 aaKnown RBP14.18□□□□□ -0.14
EIF3A-203ENST00000541549 SUPT6HQ7KZ85 1726 aaKnown RBP14.18□□□□□ -0.14
EIF3A-203ENST00000541549 PLEKHO1Q53GL0 409 aaPredicted RBP14.18□□□□□ -0.14
EIF3A-203ENST00000541549 FAM177BA6PVY3 158 aa14.17□□□□□ -0.14
EIF3A-203ENST00000541549 DYNC1I1O14576 645 aa14.17□□□□□ -0.14
EIF3A-203ENST00000541549 GLRX3O76003 335 aaKnown RBP14.17□□□□□ -0.14
EIF3A-203ENST00000541549 MYL6BP14649 208 aa14.17□□□□□ -0.14
EIF3A-203ENST00000541549 ZNF530Q6P9A1 599 aaPredicted RBP14.17□□□□□ -0.14
EIF3A-203ENST00000541549 LIMCH1Q9UPQ0 1083 aa14.17□□□□□ -0.14
EIF3A-203ENST00000541549 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
EIF3A-203ENST00000541549 ERLIN1O75477 346 aa14.17□□□□□ -0.14
EIF3A-203ENST00000541549 URI1O94763 535 aaPredicted RBP14.17□□□□□ -0.14
EIF3A-203ENST00000541549 FKBP4Q02790 459 aaKnown RBP eCLIP14.17□□□□□ -0.14
EIF3A-203ENST00000541549 DHX8Q14562 1220 aaKnown RBP14.17□□□□□ -0.14
EIF3A-203ENST00000541549 CCDC102AQ96A19 550 aa14.17□□□□□ -0.14
EIF3A-203ENST00000541549 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
EIF3A-203ENST00000541549 SPG7Q9UQ90 795 aa14.17□□□□□ -0.14
EIF3A-203ENST00000541549 RDXP35241 583 aaKnown RBP14.16□□□□□ -0.14
EIF3A-203ENST00000541549 ATAD2Q6PL18 1390 aa14.16□□□□□ -0.14
EIF3A-203ENST00000541549 EIF3JO75822 258 aaKnown RBP14.16□□□□□ -0.14
EIF3A-203ENST00000541549 KRT32Q14532 448 aa14.16□□□□□ -0.14
EIF3A-203ENST00000541549 BOLA2Q9H3K6 86 aa14.16□□□□□ -0.14
EIF3A-203ENST00000541549 RLBP1P12271 317 aa14.16□□□□□ -0.14
EIF3A-203ENST00000541549 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
EIF3A-203ENST00000541549 ABCC11Q96J66 1382 aa14.16□□□□□ -0.14
EIF3A-203ENST00000541549 CBFA2T2O43439 604 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 FAM193AP78312 1265 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 GUCY1B3Q02153 619 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 GIMAP6Q6P9H5 292 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 RRAGDQ9NQL2 400 aaPredicted RBP14.15□□□□□ -0.14
EIF3A-203ENST00000541549 EMILIN1Q9Y6C2 1016 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 POLR3GO15318 223 aaPredicted RBP14.15□□□□□ -0.14
EIF3A-203ENST00000541549 EPS15P42566 896 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 CCDC158Q5M9N0 1113 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 STX6O43752 255 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
EIF3A-203ENST00000541549 HDAC1Q13547 482 aaPredicted RBP14.15□□□□□ -0.14
EIF3A-203ENST00000541549 LRSAM1Q6UWE0 723 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 ZNHIT6Q9NWK9 470 aaKnown RBP14.15□□□□□ -0.14
EIF3A-203ENST00000541549 ZNF165P49910 485 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 TRIM22Q8IYM9 498 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 TMX3Q96JJ7 454 aa14.15□□□□□ -0.14
EIF3A-203ENST00000541549 TTC12Q9H892 705 aaPredicted RBP14.15□□□□□ -0.14
EIF3A-203ENST00000541549 MAGEC2Q9UBF1 373 aaPredicted RBP14.15□□□□□ -0.14
EIF3A-203ENST00000541549 ADGRF5Q8IZF2 1346 aa14.14□□□□□ -0.15
EIF3A-203ENST00000541549 NUCB1Q02818 461 aa14.14□□□□□ -0.15
EIF3A-203ENST00000541549 PDIA4P13667 645 aaKnown RBP14.14□□□□□ -0.15
EIF3A-203ENST00000541549 ARHGAP29Q52LW3 1261 aa14.14□□□□□ -0.15
EIF3A-203ENST00000541549 LRRFIP2Q9Y608 721 aaKnown RBP14.14□□□□□ -0.15
EIF3A-203ENST00000541549 TXLNAP40222 546 aa14.14□□□□□ -0.15
EIF3A-203ENST00000541549 RTEL1-TNFRSF6BF6WH68 1400 aa14.14□□□□□ -0.15
EIF3A-203ENST00000541549 KIF2AO00139 706 aaPredicted RBP14.13□□□□□ -0.15
EIF3A-203ENST00000541549 ANO10Q9NW15 660 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 SLC52A1Q9NWF4 448 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 ZKSCAN5Q9Y2L8 839 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 PTPRKQ15262 1439 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 TTC39AQ5SRH9 613 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 TRIM34Q9BYJ4 488 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 SH2B1Q9NRF2 756 aaPredicted RBP14.13□□□□□ -0.15
EIF3A-203ENST00000541549 CCDC61Q9Y6R9 512 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 NESP48681 1621 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 SMTNL1A8MU46 457 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 CT47A1Q5JQC4 288 aaPredicted RBP14.13□□□□□ -0.15
EIF3A-203ENST00000541549 TTC22Q5TAA0 569 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 NUP133Q8WUM0 1156 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 SDSP20132 328 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 DACH1Q9UI36 760 aa14.13□□□□□ -0.15
EIF3A-203ENST00000541549 PIP4K2AP48426 406 aaPredicted RBP14.12□□□□□ -0.15
EIF3A-203ENST00000541549 NOLC1Q14978 699 aaKnown RBP eCLIP14.12□□□□□ -0.154e-35■□□□□ 9.3
EIF3A-203ENST00000541549 WAPLQ7Z5K2 1190 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms