RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 INSM2Q96T92 566 aaPredicted RBP9.13□□□□□ -0.95
PRKDC-210ENST00000541488 GOPCQ9HD26 462 aa9.13□□□□□ -0.95
PRKDC-210ENST00000541488 KRBA1A5PL33 1030 aa9.12□□□□□ -0.95
PRKDC-210ENST00000541488 BCRP11274 1271 aa9.12□□□□□ -0.95
PRKDC-210ENST00000541488 RNF217Q8TC41 542 aa9.12□□□□□ -0.95
PRKDC-210ENST00000541488 AGBL1Q96MI9 1066 aa9.12□□□□□ -0.95
PRKDC-210ENST00000541488 MBIPQ9NS73 344 aa9.12□□□□□ -0.95
PRKDC-210ENST00000541488 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
PRKDC-210ENST00000541488 FKBPLQ9UIM3 349 aa9.12□□□□□ -0.95
PRKDC-210ENST00000541488 SH3BP5LQ7L8J4 393 aa9.11□□□□□ -0.95
PRKDC-210ENST00000541488 IGF1RP08069 1367 aa9.11□□□□□ -0.95
PRKDC-210ENST00000541488 ARHGAP9Q9BRR9 750 aa9.1□□□□□ -0.95
PRKDC-210ENST00000541488 POLMQ9NP87 494 aaPredicted RBP9.1□□□□□ -0.95
PRKDC-210ENST00000541488 RELBQ01201 579 aa9.09□□□□□ -0.95
PRKDC-210ENST00000541488 ACDQ96AP0 544 aa9.08□□□□□ -0.96
PRKDC-210ENST00000541488 ERFEQ4G0M1 354 aa9.07□□□□□ -0.96
PRKDC-210ENST00000541488 TMEM259Q4ZIN3 620 aa9.07□□□□□ -0.96
PRKDC-210ENST00000541488 ZBTB33Q86T24 672 aa9.07□□□□□ -0.96
PRKDC-210ENST00000541488 GPR25O00155 361 aa9.06□□□□□ -0.96
PRKDC-210ENST00000541488 PDXDC2PQ6P474 469 aa9.06□□□□□ -0.96
PRKDC-210ENST00000541488 GPKOWQ92917 476 aaPredicted RBP eCLIP9.06□□□□□ -0.96
PRKDC-210ENST00000541488 TRIM34Q9BYJ4 488 aa9.06□□□□□ -0.96
PRKDC-210ENST00000541488 ZNF837Q96EG3 531 aaPredicted RBP9.05□□□□□ -0.96
PRKDC-210ENST00000541488 OCSTAMPQ9BR26 566 aa9.05□□□□□ -0.96
PRKDC-210ENST00000541488 SNRPNP63162 240 aaKnown RBP9.04□□□□□ -0.96
PRKDC-210ENST00000541488 KRTAP9-9Q9BYP9 154 aa9.04□□□□□ -0.96
PRKDC-210ENST00000541488 KRTAP9-4Q9BYQ2 154 aa9.04□□□□□ -0.96
PRKDC-210ENST00000541488 ZNF395Q9H8N7 513 aaPredicted RBP9.04□□□□□ -0.96
PRKDC-210ENST00000541488 ITGB7P26010 798 aa9.03□□□□□ -0.96
PRKDC-210ENST00000541488 RAB15P59190 212 aa9.03□□□□□ -0.96
PRKDC-210ENST00000541488 PTK2Q05397 1052 aa9.03□□□□□ -0.96
PRKDC-210ENST00000541488 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
PRKDC-210ENST00000541488 ADAM32Q8TC27 787 aa9.03□□□□□ -0.96
PRKDC-210ENST00000541488 SLC10A4Q96EP9 437 aa9.03□□□□□ -0.96
PRKDC-210ENST00000541488 SNRKQ9NRH2 765 aa9.03□□□□□ -0.96
PRKDC-210ENST00000541488 COL8A1P27658 744 aa9.02□□□□□ -0.97
PRKDC-210ENST00000541488 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
PRKDC-210ENST00000541488 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
PRKDC-210ENST00000541488 ZC3H4Q9UPT8 1303 aaKnown RBP9.01□□□□□ -0.97
PRKDC-210ENST00000541488 TRIM22Q8IYM9 498 aa9□□□□□ -0.97
PRKDC-210ENST00000541488 LRRC4BQ9NT99 713 aa9□□□□□ -0.97
PRKDC-210ENST00000541488 MTMR14Q8NCE2 650 aa8.99□□□□□ -0.97
PRKDC-210ENST00000541488 KCTD15Q96SI1 283 aaPredicted RBP8.99□□□□□ -0.97
PRKDC-210ENST00000541488 BTBD11A6QL63 1104 aa8.98□□□□□ -0.97
PRKDC-210ENST00000541488 OIP5O43482 229 aa8.98□□□□□ -0.97
PRKDC-210ENST00000541488 FOXR1Q6PIV2 292 aa8.98□□□□□ -0.97
PRKDC-210ENST00000541488 LYSMD3Q7Z3D4 306 aa8.98□□□□□ -0.97
PRKDC-210ENST00000541488 ALYREFQ86V81 257 aaKnown RBP8.98□□□□□ -0.97
PRKDC-210ENST00000541488 DZIP3Q86Y13 1208 aaKnown RBP8.98□□□□□ -0.97
PRKDC-210ENST00000541488 DHX9Q08211 1270 aaKnown RBP8.97□□□□□ -0.97
PRKDC-210ENST00000541488 GMCL1Q96IK5 515 aa8.97□□□□□ -0.97
PRKDC-210ENST00000541488 MKL2Q9ULH7 1088 aa8.97□□□□□ -0.97
PRKDC-210ENST00000541488 DBN1Q16643 649 aa8.96□□□□□ -0.98
PRKDC-210ENST00000541488 INTS6LQ5JSJ4 861 aaKnown RBP8.96□□□□□ -0.98
PRKDC-210ENST00000541488 ZMYM1Q5SVZ6 1142 aa8.96□□□□□ -0.98
PRKDC-210ENST00000541488 GPSM3Q9Y4H4 160 aa8.96□□□□□ -0.98
PRKDC-210ENST00000541488 KRTAP4-8A0A0G2JLE6 195 aa8.95□□□□□ -0.98
PRKDC-210ENST00000541488 FBXO45P0C2W1 286 aa8.95□□□□□ -0.98
PRKDC-210ENST00000541488 RHOQP17081 205 aa8.95□□□□□ -0.98
PRKDC-210ENST00000541488 BANK1Q8NDB2 785 aa8.95□□□□□ -0.98
PRKDC-210ENST00000541488 GTPBP3Q969Y2 492 aaKnown RBP8.95□□□□□ -0.98
PRKDC-210ENST00000541488 PCDHB9Q9Y5E1 797 aa8.95□□□□□ -0.98
PRKDC-210ENST00000541488 ZBBXA8MT70 800 aa8.94□□□□□ -0.98
PRKDC-210ENST00000541488 RIPOR1Q6ZS17 1223 aa8.94□□□□□ -0.98
PRKDC-210ENST00000541488 TMPRSS4Q9NRS4 437 aa8.94□□□□□ -0.98
PRKDC-210ENST00000541488 C1QTNF9BB2RNN3 333 aa8.93□□□□□ -0.98
PRKDC-210ENST00000541488 SHISA8B8ZZ34 492 aa8.93□□□□□ -0.98
PRKDC-210ENST00000541488 MX2P20592 715 aa8.93□□□□□ -0.98
PRKDC-210ENST00000541488 GRIN2CQ14957 1233 aa8.93□□□□□ -0.98
PRKDC-210ENST00000541488 PRICKLE2Q7Z3G6 844 aa8.93□□□□□ -0.98
PRKDC-210ENST00000541488 SEMA6BQ9H3T3 888 aa8.93□□□□□ -0.98
PRKDC-210ENST00000541488 NDUFB9Q9Y6M9 179 aa8.93□□□□□ -0.98
PRKDC-210ENST00000541488 ADH1AP07327 375 aa8.92□□□□□ -0.98
PRKDC-210ENST00000541488 CDV3Q9UKY7 258 aaKnown RBP8.92□□□□□ -0.98
PRKDC-210ENST00000541488 PTGIRP43119 386 aa8.91□□□□□ -0.98
PRKDC-210ENST00000541488 NBPF20Q3BBV1 942 aa8.91□□□□□ -0.98
PRKDC-210ENST00000541488 KDF1Q8NAX2 398 aaPredicted RBP8.91□□□□□ -0.98
PRKDC-210ENST00000541488 TRERF1Q96PN7 1200 aa8.91□□□□□ -0.98
PRKDC-210ENST00000541488 OXCT2Q9BYC2 517 aaPredicted RBP8.91□□□□□ -0.98
PRKDC-210ENST00000541488 NSFL1CQ9UNZ2 370 aaKnown RBP8.91□□□□□ -0.98
PRKDC-210ENST00000541488 TBC1D2BQ9UPU7 963 aa8.91□□□□□ -0.98
PRKDC-210ENST00000541488 GPR37L1O60883 481 aa8.9□□□□□ -0.98
PRKDC-210ENST00000541488 CD163Q86VB7 1156 aa8.9□□□□□ -0.98
PRKDC-210ENST00000541488 SUV39H2Q9H5I1 410 aa8.9□□□□□ -0.98
PRKDC-210ENST00000541488 RRAGCQ9HB90 399 aa8.9□□□□□ -0.98
PRKDC-210ENST00000541488 ERVH48-1M5A8F1 160 aa8.89□□□□□ -0.99
PRKDC-210ENST00000541488 GIGYF1O75420 1035 aaPredicted RBP8.89□□□□□ -0.99
PRKDC-210ENST00000541488 KRTAP19-1Q8IUB9 90 aa8.89□□□□□ -0.99
PRKDC-210ENST00000541488 ZNF784Q8NCA9 323 aaPredicted RBP8.89□□□□□ -0.99
PRKDC-210ENST00000541488 ADD1P35611 737 aaKnown RBP8.88□□□□□ -0.99
PRKDC-210ENST00000541488 C1orf229Q6ZS94 237 aaPredicted RBP8.88□□□□□ -0.99
PRKDC-210ENST00000541488 NR1H3Q13133 447 aa8.87□□□□□ -0.99
PRKDC-210ENST00000541488 CYLDQ9NQC7 956 aa8.87□□□□□ -0.99
PRKDC-210ENST00000541488 SCO2A0A1W2PP80 73 aa8.86□□□□□ -0.99
PRKDC-210ENST00000541488 H7C1W4 665 aa8.86□□□□□ -0.99
PRKDC-210ENST00000541488 APBB1O00213 710 aa8.86□□□□□ -0.99
PRKDC-210ENST00000541488 CHRNA4P43681 627 aa8.86□□□□□ -0.99
PRKDC-210ENST00000541488 DOC2BQ14184 412 aa8.86□□□□□ -0.99
PRKDC-210ENST00000541488 GDPD2Q9HCC8 539 aa8.86□□□□□ -0.99
PRKDC-210ENST00000541488 LILRA1O75019 489 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms