RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 CC2D1BQ5T0F9 858 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-206ENST00000540896 ZDHHC16Q969W1 377 aa9.03□□□□□ -0.96
CLTCL1-206ENST00000540896 ORAI2Q96SN7 254 aa9.03□□□□□ -0.96
CLTCL1-206ENST00000540896 VPS9D1Q9Y2B5 631 aa9.03□□□□□ -0.96
CLTCL1-206ENST00000540896 C1orf167Q5SNV9 1468 aa9.02□□□□□ -0.96
CLTCL1-206ENST00000540896 NINLQ9Y2I6 1382 aa9.02□□□□□ -0.97
CLTCL1-206ENST00000540896 PER1O15534 1290 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-206ENST00000540896 BRINP3Q76B58 766 aa9.02□□□□□ -0.97
CLTCL1-206ENST00000540896 KTN1Q86UP2 1357 aaKnown RBP9.01□□□□□ -0.97
CLTCL1-206ENST00000540896 PPIP5K1Q6PFW1 1433 aa9.01□□□□□ -0.97
CLTCL1-206ENST00000540896 NGDNQ8NEJ9 315 aaKnown RBP9.01□□□□□ -0.97
CLTCL1-206ENST00000540896 CARD14Q9BXL6 1004 aa9.01□□□□□ -0.97
CLTCL1-206ENST00000540896 PRKRIP1Q9H875 184 aaPredicted RBP9.01□□□□□ -0.97
CLTCL1-206ENST00000540896 RGPD8O14715 1765 aaPredicted RBP9.01□□□□□ -0.97
CLTCL1-206ENST00000540896 PRR36Q9H6K5 1346 aa9.01□□□□□ -0.97
CLTCL1-206ENST00000540896 ROBO1Q9Y6N7 1651 aa9□□□□□ -0.97
CLTCL1-206ENST00000540896 ANKARQ7Z5J8 1434 aa9□□□□□ -0.97
CLTCL1-206ENST00000540896 RALBP1Q15311 655 aa9□□□□□ -0.97
CLTCL1-206ENST00000540896 PMFBP1Q8TBY8 1022 aa9□□□□□ -0.97
CLTCL1-206ENST00000540896 BBXQ8WY36 941 aaPredicted RBP9□□□□□ -0.97
CLTCL1-206ENST00000540896 USP32Q8NFA0 1604 aa9□□□□□ -0.97
CLTCL1-206ENST00000540896 CGNL1Q0VF96 1302 aa9□□□□□ -0.97
CLTCL1-206ENST00000540896 ANKRD36BQ8N2N9 1353 aa8.99□□□□□ -0.97
CLTCL1-206ENST00000540896 PLEKHG3A1L390 1219 aa8.99□□□□□ -0.97
CLTCL1-206ENST00000540896 KCTD12Q96CX2 325 aaKnown RBP8.99□□□□□ -0.97
CLTCL1-206ENST00000540896 PLA2G2EQ9NZK7 142 aa8.99□□□□□ -0.97
CLTCL1-206ENST00000540896 A0A1W2PP64 1363 aa8.99□□□□□ -0.97
CLTCL1-206ENST00000540896 NSD3Q9BZ95 1437 aa8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 ATP7BP35670 1465 aa8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 GOLGA8CPA6NN73 597 aa8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 CCER2I3L3R5 266 aa8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 FOXO3O43524 673 aa8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 HSPA1LP34931 641 aa8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 PSME1Q06323 249 aa8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 MORC1Q86VD1 984 aa8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 DDX17Q92841 729 aaKnown RBP8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 FBXW7Q969H0 707 aa8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 ACEP12821 1306 aa8.98□□□□□ -0.97
CLTCL1-206ENST00000540896 ITSN1Q15811 1721 aa8.97□□□□□ -0.97
CLTCL1-206ENST00000540896 TNNT2P45379 298 aaPredicted RBP8.96□□□□□ -0.98
CLTCL1-206ENST00000540896 XPCQ01831 940 aaPredicted RBP8.96□□□□□ -0.98
CLTCL1-206ENST00000540896 ZBED2Q9BTP6 218 aa8.96□□□□□ -0.98
CLTCL1-206ENST00000540896 NBPF3Q9H094 633 aa8.96□□□□□ -0.98
CLTCL1-206ENST00000540896 GGNBP2Q9H3C7 697 aa8.96□□□□□ -0.98
CLTCL1-206ENST00000540896 NPHP3Q7Z494 1330 aa8.96□□□□□ -0.98
CLTCL1-206ENST00000540896 MYBBP1AQ9BQG0 1328 aaKnown RBP8.96□□□□□ -0.98
CLTCL1-206ENST00000540896 KIF1AQ12756 1690 aa8.95□□□□□ -0.98
CLTCL1-206ENST00000540896 TOPAZ1Q8N9V7 1692 aa8.95□□□□□ -0.98
CLTCL1-206ENST00000540896 KRT28Q7Z3Y7 464 aa8.95□□□□□ -0.98
CLTCL1-206ENST00000540896 MRPL50Q8N5N7 158 aaKnown RBP8.95□□□□□ -0.98
CLTCL1-206ENST00000540896 MRS2Q9HD23 443 aa8.95□□□□□ -0.98
CLTCL1-206ENST00000540896 EMILIN3Q9NT22 766 aa8.95□□□□□ -0.98
CLTCL1-206ENST00000540896 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.95□□□□□ -0.98
CLTCL1-206ENST00000540896 CPSF1Q10570 1443 aaKnown RBP8.95□□□□□ -0.98
CLTCL1-206ENST00000540896 MYOM1P52179 1685 aa8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 BHMG1C9JSJ3 638 aaPredicted RBP8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 FYB1O15117 783 aa8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 PHF14O94880 888 aa8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 CAMK2BQ13554 666 aa8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 TYW1BQ6NUM6 668 aa8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 LRRC59Q96AG4 307 aaKnown RBP8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 ADAM33Q9BZ11 813 aa8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 SOS2Q07890 1332 aaPredicted RBP8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 POLR3AO14802 1390 aaPredicted RBP8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 NPC1L1Q9UHC9 1359 aa8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 NHSL1Q5SYE7 1610 aa8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 AHDC1Q5TGY3 1603 aaPredicted RBP8.94□□□□□ -0.98
CLTCL1-206ENST00000540896 PPP1R3GB7ZBB8 358 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 PPP2R1AP30153 589 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 NLRP13Q86W25 1043 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 NME9Q86XW9 330 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 COG3Q96JB2 828 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 EPAS1Q99814 870 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 TTC21BQ7Z4L5 1316 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 NSD2O96028 1365 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 PARD3Q8TEW0 1356 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 EDC4Q6P2E9 1401 aaKnown RBP8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 PXDNQ92626 1479 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 CD163L1Q9NR16 1453 aa8.93□□□□□ -0.98
CLTCL1-206ENST00000540896 LMOD2Q6P5Q4 547 aa8.92□□□□□ -0.98
CLTCL1-206ENST00000540896 SPRYD3Q8NCJ5 442 aa8.92□□□□□ -0.98
CLTCL1-206ENST00000540896 YTHDC1Q96MU7 727 aaKnown RBP8.92□□□□□ -0.98
CLTCL1-206ENST00000540896 PCDHGA10Q9Y5H3 936 aa8.92□□□□□ -0.98
CLTCL1-206ENST00000540896 COL16A1Q07092 1604 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-206ENST00000540896 USP6P35125 1406 aa8.91□□□□□ -0.98
CLTCL1-206ENST00000540896 TTC21AQ8NDW8 1320 aa8.91□□□□□ -0.98
CLTCL1-206ENST00000540896 CCDC184Q52MB2 194 aa8.91□□□□□ -0.98
CLTCL1-206ENST00000540896 FAM9BQ8IZU0 186 aa8.91□□□□□ -0.98
CLTCL1-206ENST00000540896 ABTB2Q8N961 1025 aa8.91□□□□□ -0.98
CLTCL1-206ENST00000540896 SBNO1A3KN83 1393 aa8.9□□□□□ -0.98
CLTCL1-206ENST00000540896 BRD4O60885 1362 aaPredicted RBP8.9□□□□□ -0.98
CLTCL1-206ENST00000540896 SPATA31A3Q5VYP0 1347 aa8.9□□□□□ -0.98
CLTCL1-206ENST00000540896 WNT2BQ93097 391 aa8.9□□□□□ -0.98
CLTCL1-206ENST00000540896 CFAP53Q96M91 514 aa8.9□□□□□ -0.98
CLTCL1-206ENST00000540896 RABGEF1Q9UJ41 708 aa8.9□□□□□ -0.98
CLTCL1-206ENST00000540896 AKAP12Q02952 1782 aa8.89□□□□□ -0.99
CLTCL1-206ENST00000540896 JCADQ9P266 1359 aa8.89□□□□□ -0.99
CLTCL1-206ENST00000540896 PPM1GO15355 546 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms