RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 LRRC37A3O60309 1634 aa19.98■□□□□ 0.79
MDM1-210ENST00000540418 FAM182BQ5T319 152 aa19.98■□□□□ 0.79
MDM1-210ENST00000540418 MARCH10Q8NA82 808 aaPredicted RBP19.98■□□□□ 0.79
MDM1-210ENST00000540418 HMOX1P09601 288 aa19.98■□□□□ 0.79
MDM1-210ENST00000540418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.97■□□□□ 0.79
MDM1-210ENST00000540418 FAM196AQ6ZSG2 479 aa19.97■□□□□ 0.79
MDM1-210ENST00000540418 DDX54Q8TDD1 881 aaKnown RBP19.96■□□□□ 0.79
MDM1-210ENST00000540418 SPG7Q9UQ90 795 aa19.96■□□□□ 0.79
MDM1-210ENST00000540418 PLEKHG2Q9H7P9 1386 aa19.96■□□□□ 0.79
MDM1-210ENST00000540418 U2AF1L5P0DN76 240 aaPredicted RBP19.96■□□□□ 0.79
MDM1-210ENST00000540418 U2AF1Q01081 240 aaKnown RBP eCLIP19.96■□□□□ 0.79
MDM1-210ENST00000540418 AMOTQ4VCS5 1084 aa19.94■□□□□ 0.78
MDM1-210ENST00000540418 PLEKHO1Q53GL0 409 aaPredicted RBP19.94■□□□□ 0.78
MDM1-210ENST00000540418 PCDH11XQ9BZA7 1347 aa19.93■□□□□ 0.78
MDM1-210ENST00000540418 PCDH11YQ9BZA8 1340 aa19.93■□□□□ 0.78
MDM1-210ENST00000540418 FCHSD2O94868 740 aa19.92■□□□□ 0.78
MDM1-210ENST00000540418 RSPH6AQ9H0K4 717 aa19.91■□□□□ 0.78
MDM1-210ENST00000540418 BCL9O00512 1426 aa19.91■□□□□ 0.78
MDM1-210ENST00000540418 CYP27B1O15528 508 aa19.91■□□□□ 0.78
MDM1-210ENST00000540418 SOCS7O14512 581 aa19.9■□□□□ 0.78
MDM1-210ENST00000540418 DIEXFQ68CQ4 756 aaKnown RBP19.9■□□□□ 0.78
MDM1-210ENST00000540418 UPF1Q92900 1129 aaKnown RBP eCLIP19.9■□□□□ 0.78
MDM1-210ENST00000540418 PRKAR2BP31323 418 aa19.89■□□□□ 0.77
MDM1-210ENST00000540418 IFNL2Q8IZJ0 200 aa19.89■□□□□ 0.77
MDM1-210ENST00000540418 CCDC125Q86Z20 511 aa19.88■□□□□ 0.77
MDM1-210ENST00000540418 PKD1L3Q7Z443 1732 aa19.88■□□□□ 0.77
MDM1-210ENST00000540418 CCDC184Q52MB2 194 aa19.87■□□□□ 0.77
MDM1-210ENST00000540418 PHKG2P15735 406 aa19.87■□□□□ 0.77
MDM1-210ENST00000540418 WDR43Q15061 677 aaKnown RBP eCLIP19.87■□□□□ 0.77
MDM1-210ENST00000540418 ZNF530Q6P9A1 599 aaPredicted RBP19.87■□□□□ 0.77
MDM1-210ENST00000540418 PNNQ9H307 717 aaKnown RBP19.87■□□□□ 0.77
MDM1-210ENST00000540418 NKX1-1Q15270 411 aaPredicted RBP19.86■□□□□ 0.77
MDM1-210ENST00000540418 TRIM37O94972 964 aa19.86■□□□□ 0.77
MDM1-210ENST00000540418 SHANK3Q9BYB0 1731 aa19.86■□□□□ 0.77
MDM1-210ENST00000540418 EP400Q96L91 3159 aa19.86■□□□□ 0.77
MDM1-210ENST00000540418 MTHFSDQ2M296 383 aaKnown RBP19.85■□□□□ 0.77
MDM1-210ENST00000540418 PHACTR3Q96KR7 559 aa19.85■□□□□ 0.77
MDM1-210ENST00000540418 C1orf141Q5JVX7 400 aa19.84■□□□□ 0.77
MDM1-210ENST00000540418 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
MDM1-210ENST00000540418 ACSBG1Q96GR2 724 aa19.83■□□□□ 0.77
MDM1-210ENST00000540418 PLEKHF1Q96S99 279 aa19.83■□□□□ 0.77
MDM1-210ENST00000540418 BCL11BQ9C0K0 894 aaPredicted RBP19.83■□□□□ 0.77
MDM1-210ENST00000540418 ADAMTS8Q9UP79 889 aa19.83■□□□□ 0.77
MDM1-210ENST00000540418 HSP90AB1P08238 724 aaKnown RBP19.83■□□□□ 0.76
MDM1-210ENST00000540418 SF3B2Q13435 895 aaKnown RBP19.83■□□□□ 0.76
MDM1-210ENST00000540418 NEFMP07197 916 aa19.82■□□□□ 0.76
MDM1-210ENST00000540418 AKAP4Q5JQC9 854 aa19.82■□□□□ 0.76
MDM1-210ENST00000540418 GAS2L2Q8NHY3 880 aa19.82■□□□□ 0.76
MDM1-210ENST00000540418 KCNQ2O43526 872 aa19.82■□□□□ 0.76
MDM1-210ENST00000540418 PRIM1P49642 420 aaKnown RBP19.81■□□□□ 0.76
MDM1-210ENST00000540418 DCAF5Q96JK2 942 aa19.81■□□□□ 0.76
MDM1-210ENST00000540418 PTF1AQ7RTS3 328 aa19.8■□□□□ 0.76
MDM1-210ENST00000540418 PNISRQ8TF01 805 aaKnown RBP19.8■□□□□ 0.76
MDM1-210ENST00000540418 SYTL4Q96C24 671 aaPredicted RBP19.79■□□□□ 0.76
MDM1-210ENST00000540418 APBA3O96018 575 aa19.78■□□□□ 0.76
MDM1-210ENST00000540418 MAPK8IP3Q9UPT6 1336 aa19.78■□□□□ 0.76
MDM1-210ENST00000540418 MPRIPQ6WCQ1 1025 aa19.78■□□□□ 0.76
MDM1-210ENST00000540418 GNAT3A8MTJ3 354 aa19.77■□□□□ 0.76
MDM1-210ENST00000540418 ERVV-2B6SEH9 535 aa19.77■□□□□ 0.76
MDM1-210ENST00000540418 SBF2Q86WG5 1849 aa19.77■□□□□ 0.75
MDM1-210ENST00000540418 RUNDC1Q96C34 613 aa19.76■□□□□ 0.75
MDM1-210ENST00000540418 CCER2I3L3R5 266 aa19.76■□□□□ 0.75
MDM1-210ENST00000540418 BAG6P46379 1132 aa19.76■□□□□ 0.75
MDM1-210ENST00000540418 CCDC146Q8IYE0 955 aa19.75■□□□□ 0.75
MDM1-210ENST00000540418 MAP3K5Q99683 1374 aa19.75■□□□□ 0.75
MDM1-210ENST00000540418 NHSQ6T4R5 1651 aa19.75■□□□□ 0.75
MDM1-210ENST00000540418 LGR6Q9HBX8 967 aa19.75■□□□□ 0.75
MDM1-210ENST00000540418 KDM6AO15550 1401 aaPredicted RBP19.75■□□□□ 0.75
MDM1-210ENST00000540418 RNMTO43148 476 aaKnown RBP19.74■□□□□ 0.75
MDM1-210ENST00000540418 NFE2L2Q16236 605 aa19.74■□□□□ 0.75
MDM1-210ENST00000540418 MIER1Q8N108 512 aa19.74■□□□□ 0.75
MDM1-210ENST00000540418 DEFB132Q7Z7B7 95 aa19.74■□□□□ 0.75
MDM1-210ENST00000540418 PLSCR1O15162 318 aa19.73■□□□□ 0.75
MDM1-210ENST00000540418 TMOD3Q9NYL9 352 aa19.73■□□□□ 0.75
MDM1-210ENST00000540418 DOT1LQ8TEK3 1739 aa19.73■□□□□ 0.75
MDM1-210ENST00000540418 CABP4P57796 275 aa19.73■□□□□ 0.75
MDM1-210ENST00000540418 PIGBQ92521 554 aa19.73■□□□□ 0.75
MDM1-210ENST00000540418 HTATSF1O43719 755 aaKnown RBP19.72■□□□□ 0.75
MDM1-210ENST00000540418 EN1Q05925 392 aaPredicted RBP19.72■□□□□ 0.75
MDM1-210ENST00000540418 TNS1Q9HBL0 1735 aaKnown RBP19.72■□□□□ 0.75
MDM1-210ENST00000540418 IL17REQ8NFR9 667 aa19.72■□□□□ 0.75
MDM1-210ENST00000540418 RTF1Q92541 710 aaKnown RBP19.72■□□□□ 0.75
MDM1-210ENST00000540418 TOGARAM1Q9Y4F4 1720 aa19.71■□□□□ 0.75
MDM1-210ENST00000540418 NFATC2IPQ8NCF5 419 aa19.71■□□□□ 0.75
MDM1-210ENST00000540418 CAMKK2Q96RR4 588 aa19.71■□□□□ 0.75
MDM1-210ENST00000540418 TMPOP42166 694 aaKnown RBP19.7■□□□□ 0.74
MDM1-210ENST00000540418 FAM9BQ8IZU0 186 aa19.69■□□□□ 0.74
MDM1-210ENST00000540418 SLC52A2Q9HAB3 445 aa19.69■□□□□ 0.74
MDM1-210ENST00000540418 RIPK4P57078 832 aa19.69■□□□□ 0.74
MDM1-210ENST00000540418 EZH2Q15910 746 aaKnown RBP19.68■□□□□ 0.74
MDM1-210ENST00000540418 KAT6BQ8WYB5 2073 aa19.68■□□□□ 0.74
MDM1-210ENST00000540418 CEMIPQ8WUJ3 1361 aa19.67■□□□□ 0.74
MDM1-210ENST00000540418 MCM10Q7L590 875 aa19.67■□□□□ 0.74
MDM1-210ENST00000540418 ADAMTS7Q9UKP4 1686 aa19.67■□□□□ 0.74
MDM1-210ENST00000540418 APAF1O14727 1248 aa19.67■□□□□ 0.74
MDM1-210ENST00000540418 SMARCC1Q92922 1105 aaPredicted RBP19.67■□□□□ 0.74
MDM1-210ENST00000540418 RRP7AQ9Y3A4 280 aaKnown RBP19.67■□□□□ 0.74
MDM1-210ENST00000540418 BTAF1O14981 1849 aa19.67■□□□□ 0.74
MDM1-210ENST00000540418 TEFQ10587 303 aa19.66■□□□□ 0.74
MDM1-210ENST00000540418 DCTN1Q14203 1278 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms