RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 C16orf71Q8IYS4 520 aaPredicted RBP11.99□□□□□ -0.49
KLHL42-203ENST00000540301 DDX54Q8TDD1 881 aaKnown RBP11.99□□□□□ -0.49
KLHL42-203ENST00000540301 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
KLHL42-203ENST00000540301 HSPA1AP0DMV8 641 aaKnown RBP11.98□□□□□ -0.49
KLHL42-203ENST00000540301 HSPA1BP0DMV9 641 aaKnown RBP11.98□□□□□ -0.49
KLHL42-203ENST00000540301 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
KLHL42-203ENST00000540301 FSTL1Q12841 308 aa11.98□□□□□ -0.49
KLHL42-203ENST00000540301 LY75O60449 1722 aa11.97□□□□□ -0.49
KLHL42-203ENST00000540301 ERBB3P21860 1342 aa11.97□□□□□ -0.49
KLHL42-203ENST00000540301 FLAD1Q8NFF5 587 aa11.97□□□□□ -0.49
KLHL42-203ENST00000540301 ANKRD36BQ8N2N9 1353 aa11.95□□□□□ -0.5
KLHL42-203ENST00000540301 TTC21BQ7Z4L5 1316 aa11.95□□□□□ -0.5
KLHL42-203ENST00000540301 CICQ96RK0 1608 aaPredicted RBP11.95□□□□□ -0.5
KLHL42-203ENST00000540301 NFAT5O94916 1531 aa11.95□□□□□ -0.5
KLHL42-203ENST00000540301 QRICH2Q9H0J4 1663 aa11.94□□□□□ -0.5
KLHL42-203ENST00000540301 NSD2O96028 1365 aa11.93□□□□□ -0.5
KLHL42-203ENST00000540301 ANKRD24Q8TF21 1146 aa11.93□□□□□ -0.5
KLHL42-203ENST00000540301 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
KLHL42-203ENST00000540301 USP47Q96K76 1375 aa11.92□□□□□ -0.5
KLHL42-203ENST00000540301 TTC21AQ8NDW8 1320 aa11.92□□□□□ -0.5
KLHL42-203ENST00000540301 HMGB2P26583 209 aaKnown RBP11.92□□□□□ -0.5
KLHL42-203ENST00000540301 ARHGAP27Q6ZUM4 889 aa11.92□□□□□ -0.5
KLHL42-203ENST00000540301 CENPJQ9HC77 1338 aaPredicted RBP11.91□□□□□ -0.5
KLHL42-203ENST00000540301 BCS1LQ9Y276 419 aa11.91□□□□□ -0.5
KLHL42-203ENST00000540301 DOT1LQ8TEK3 1739 aa11.91□□□□□ -0.5
KLHL42-203ENST00000540301 PCNTO95613 3336 aa11.91□□□□□ -0.5
KLHL42-203ENST00000540301 SMC1BQ8NDV3 1235 aa11.9□□□□□ -0.5
KLHL42-203ENST00000540301 KDM2BQ8NHM5 1336 aa11.89□□□□□ -0.51
KLHL42-203ENST00000540301 RRAGCQ9HB90 399 aa11.89□□□□□ -0.51
KLHL42-203ENST00000540301 C5P01031 1676 aa11.89□□□□□ -0.51
KLHL42-203ENST00000540301 PHF14O94880 888 aa11.88□□□□□ -0.51
KLHL42-203ENST00000540301 C9orf131Q5VYM1 1079 aa11.88□□□□□ -0.51
KLHL42-203ENST00000540301 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
KLHL42-203ENST00000540301 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
KLHL42-203ENST00000540301 NBPF1Q3BBV0 1214 aa11.87□□□□□ -0.51
KLHL42-203ENST00000540301 AMIGO3Q86WK7 504 aa11.87□□□□□ -0.51
KLHL42-203ENST00000540301 AK7Q96M32 723 aa11.87□□□□□ -0.51
KLHL42-203ENST00000540301 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
KLHL42-203ENST00000540301 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
KLHL42-203ENST00000540301 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
KLHL42-203ENST00000540301 A0A0G2JLW4 131 aa11.86□□□□□ -0.51
KLHL42-203ENST00000540301 TGFB2P61812 414 aa11.86□□□□□ -0.51
KLHL42-203ENST00000540301 SMIM5Q71RC9 77 aa11.86□□□□□ -0.51
KLHL42-203ENST00000540301 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
KLHL42-203ENST00000540301 PXDNLA1KZ92 1463 aa11.86□□□□□ -0.51
KLHL42-203ENST00000540301 LTN1O94822 1766 aa11.86□□□□□ -0.51
KLHL42-203ENST00000540301 FCHSD2O94868 740 aa11.85□□□□□ -0.51
KLHL42-203ENST00000540301 FAM161AQ3B820 660 aa11.85□□□□□ -0.51
KLHL42-203ENST00000540301 LTV1Q96GA3 475 aaPredicted RBP11.85□□□□□ -0.51
KLHL42-203ENST00000540301 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
KLHL42-203ENST00000540301 EVC2Q86UK5 1308 aa11.85□□□□□ -0.51
KLHL42-203ENST00000540301 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
KLHL42-203ENST00000540301 KTN1Q86UP2 1357 aaKnown RBP11.84□□□□□ -0.51
KLHL42-203ENST00000540301 PALLDQ8WX93 1383 aa11.84□□□□□ -0.51
KLHL42-203ENST00000540301 KIAA1210Q9ULL0 1709 aa11.84□□□□□ -0.51
KLHL42-203ENST00000540301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.84□□□□□ -0.51
KLHL42-203ENST00000540301 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
KLHL42-203ENST00000540301 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
KLHL42-203ENST00000540301 MMP10P09238 476 aa11.83□□□□□ -0.52
KLHL42-203ENST00000540301 SSFA2P28290 1259 aa11.83□□□□□ -0.52
KLHL42-203ENST00000540301 NSD3Q9BZ95 1437 aa11.83□□□□□ -0.52
KLHL42-203ENST00000540301 TOGARAM1Q9Y4F4 1720 aa11.83□□□□□ -0.52
KLHL42-203ENST00000540301 DPEP1P16444 411 aa11.82□□□□□ -0.52
KLHL42-203ENST00000540301 NME9Q86XW9 330 aa11.82□□□□□ -0.52
KLHL42-203ENST00000540301 PRDM10Q9NQV6 1147 aa11.82□□□□□ -0.52
KLHL42-203ENST00000540301 RNF181Q9P0P0 153 aa11.82□□□□□ -0.52
KLHL42-203ENST00000540301 KIAA1551Q9HCM1 1747 aa11.82□□□□□ -0.52
KLHL42-203ENST00000540301 UBR3Q6ZT12 1888 aa11.82□□□□□ -0.52
KLHL42-203ENST00000540301 KIF13BQ9NQT8 1826 aa11.81□□□□□ -0.52
KLHL42-203ENST00000540301 TNRC6CQ9HCJ0 1690 aaKnown RBP11.81□□□□□ -0.52
KLHL42-203ENST00000540301 IP6K1Q92551 441 aa11.81□□□□□ -0.52
KLHL42-203ENST00000540301 PKD1L3Q7Z443 1732 aa11.8□□□□□ -0.52
KLHL42-203ENST00000540301 FOXN1O15353 648 aa11.8□□□□□ -0.52
KLHL42-203ENST00000540301 MPRIPQ6WCQ1 1025 aa11.8□□□□□ -0.52
KLHL42-203ENST00000540301 FAM208AQ9UK61 1670 aaKnown RBP11.8□□□□□ -0.52
KLHL42-203ENST00000540301 SMARCC1Q92922 1105 aaPredicted RBP11.79□□□□□ -0.52
KLHL42-203ENST00000540301 MEGF6O75095 1541 aa11.79□□□□□ -0.52
KLHL42-203ENST00000540301 VEGFAP15692 232 aaPredicted RBP11.78□□□□□ -0.52
KLHL42-203ENST00000540301 BRCA1P38398 1863 aaKnown RBP11.77□□□□□ -0.53
KLHL42-203ENST00000540301 GNPATO15228 680 aa11.77□□□□□ -0.53
KLHL42-203ENST00000540301 KCNA3P22001 575 aa11.77□□□□□ -0.53
KLHL42-203ENST00000540301 MLLT1Q03111 559 aaPredicted RBP11.77□□□□□ -0.53
KLHL42-203ENST00000540301 ABHD8Q96I13 439 aa11.77□□□□□ -0.53
KLHL42-203ENST00000540301 DCAF5Q96JK2 942 aa11.77□□□□□ -0.53
KLHL42-203ENST00000540301 CCDC87Q9NVE4 849 aa11.77□□□□□ -0.53
KLHL42-203ENST00000540301 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
KLHL42-203ENST00000540301 MKRN1Q9UHC7 482 aaKnown RBP11.77□□□□□ -0.53
KLHL42-203ENST00000540301 MON2Q7Z3U7 1717 aa11.77□□□□□ -0.53
KLHL42-203ENST00000540301 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
KLHL42-203ENST00000540301 CTCFP49711 727 aaPredicted RBP11.76□□□□□ -0.53
KLHL42-203ENST00000540301 NLGN1Q8N2Q7 840 aa11.76□□□□□ -0.53
KLHL42-203ENST00000540301 LINC00116Q8NCU8 138 aa11.76□□□□□ -0.53
KLHL42-203ENST00000540301 AIDAQ96BJ3 306 aa11.76□□□□□ -0.53
KLHL42-203ENST00000540301 CGNL1Q0VF96 1302 aa11.76□□□□□ -0.53
KLHL42-203ENST00000540301 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
KLHL42-203ENST00000540301 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
KLHL42-203ENST00000540301 SBNO2Q9Y2G9 1366 aa11.75□□□□□ -0.53
KLHL42-203ENST00000540301 LOC102724428A0A0B4J2F2 783 aa11.74□□□□□ -0.53
KLHL42-203ENST00000540301 GLTPD2A6NH11 291 aa11.74□□□□□ -0.53
KLHL42-203ENST00000540301 SIK1P57059 783 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms