RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 PRR36Q9H6K5 1346 aa8.91□□□□□ -0.98
SNHG1-212ENST00000539975 MEX3CQ5U5Q3 659 aaKnown RBP8.91□□□□□ -0.98
SNHG1-212ENST00000539975 KCNV2Q8TDN2 545 aa8.91□□□□□ -0.98
SNHG1-212ENST00000539975 DDX17Q92841 729 aaKnown RBP8.91□□□□□ -0.98
SNHG1-212ENST00000539975 QRICH2Q9H0J4 1663 aa8.91□□□□□ -0.98
SNHG1-212ENST00000539975 JCADQ9P266 1359 aa8.9□□□□□ -0.98
SNHG1-212ENST00000539975 SOS2Q07890 1332 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-212ENST00000539975 XIRP1Q702N8 1843 aaKnown RBP8.9□□□□□ -0.98
SNHG1-212ENST00000539975 PHF14O94880 888 aa8.9□□□□□ -0.98
SNHG1-212ENST00000539975 ABTB2Q8N961 1025 aa8.9□□□□□ -0.98
SNHG1-212ENST00000539975 SLC12A5Q9H2X9 1139 aa8.9□□□□□ -0.98
SNHG1-212ENST00000539975 ROBO1Q9Y6N7 1651 aa8.9□□□□□ -0.98
SNHG1-212ENST00000539975 ARHGEF10O15013 1369 aa8.89□□□□□ -0.99
SNHG1-212ENST00000539975 BRD4O60885 1362 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-212ENST00000539975 KTN1Q86UP2 1357 aaKnown RBP8.89□□□□□ -0.99
SNHG1-212ENST00000539975 SPATA31A6Q5VVP1 1343 aa8.89□□□□□ -0.99
SNHG1-212ENST00000539975 NUTM2BA6NNL0 878 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-212ENST00000539975 NUTM2EB1AL46 878 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-212ENST00000539975 NUTM2AQ8IVF1 878 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-212ENST00000539975 ZNF454Q8N9F8 522 aa8.89□□□□□ -0.99
SNHG1-212ENST00000539975 EPAS1Q99814 870 aa8.89□□□□□ -0.99
SNHG1-212ENST00000539975 ATP7BP35670 1465 aa8.89□□□□□ -0.99
SNHG1-212ENST00000539975 FMN2Q9NZ56 1722 aa8.88□□□□□ -0.99
SNHG1-212ENST00000539975 NLRP13Q86W25 1043 aa8.88□□□□□ -0.99
SNHG1-212ENST00000539975 FBXW7Q969H0 707 aa8.88□□□□□ -0.99
SNHG1-212ENST00000539975 SBNO1A3KN83 1393 aa8.87□□□□□ -0.99
SNHG1-212ENST00000539975 POLR3AO14802 1390 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-212ENST00000539975 DISP3Q9P2K9 1392 aa8.87□□□□□ -0.99
SNHG1-212ENST00000539975 SPATA31A3Q5VYP0 1347 aa8.87□□□□□ -0.99
SNHG1-212ENST00000539975 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNHG1-212ENST00000539975 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
SNHG1-212ENST00000539975 KIF1AQ12756 1690 aa8.87□□□□□ -0.99
SNHG1-212ENST00000539975 TTC21AQ8NDW8 1320 aa8.86□□□□□ -0.99
SNHG1-212ENST00000539975 ARHGAP33O14559 1287 aa8.86□□□□□ -0.99
SNHG1-212ENST00000539975 TYW1BQ6NUM6 668 aa8.86□□□□□ -0.99
SNHG1-212ENST00000539975 BCL2L12Q9HB09 334 aa8.86□□□□□ -0.99
SNHG1-212ENST00000539975 KNSTRNQ9Y448 316 aa8.86□□□□□ -0.99
SNHG1-212ENST00000539975 AHDC1Q5TGY3 1603 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-212ENST00000539975 NUTM2GQ5VZR2 741 aa8.85□□□□□ -0.99
SNHG1-212ENST00000539975 KCNH5Q8NCM2 988 aa8.85□□□□□ -0.99
SNHG1-212ENST00000539975 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
SNHG1-212ENST00000539975 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
SNHG1-212ENST00000539975 PCDHGA10Q9Y5H3 936 aa8.85□□□□□ -0.99
SNHG1-212ENST00000539975 TNS3Q68CZ2 1445 aa8.85□□□□□ -0.99
SNHG1-212ENST00000539975 PHLPP1O60346 1717 aa8.85□□□□□ -0.99
SNHG1-212ENST00000539975 ANKRD36BQ8N2N9 1353 aa8.85□□□□□ -0.99
SNHG1-212ENST00000539975 TTC21BQ7Z4L5 1316 aa8.84□□□□□ -0.99
SNHG1-212ENST00000539975 ADAMTS2O95450 1211 aa8.84□□□□□ -0.99
SNHG1-212ENST00000539975 USP6P35125 1406 aa8.84□□□□□ -0.99
SNHG1-212ENST00000539975 ITSN1Q15811 1721 aa8.84□□□□□ -0.99
SNHG1-212ENST00000539975 NGLY1Q96IV0 654 aa8.84□□□□□ -0.99
SNHG1-212ENST00000539975 COG3Q96JB2 828 aa8.84□□□□□ -0.99
SNHG1-212ENST00000539975 PXDNQ92626 1479 aa8.83□□□□□ -1
SNHG1-212ENST00000539975 CGNL1Q0VF96 1302 aa8.83□□□□□ -1
SNHG1-212ENST00000539975 KIF7Q2M1P5 1343 aa8.83□□□□□ -1
SNHG1-212ENST00000539975 PANK3Q9H999 370 aa8.83□□□□□ -1
SNHG1-212ENST00000539975 A0A1W2PP64 1363 aa8.83□□□□□ -1
SNHG1-212ENST00000539975 PNPLA6Q8IY17 1366 aa8.83□□□□□ -1
SNHG1-212ENST00000539975 CPSF1Q10570 1443 aaKnown RBP8.82□□□□□ -1
SNHG1-212ENST00000539975 EDC4Q6P2E9 1401 aaKnown RBP8.82□□□□□ -1
SNHG1-212ENST00000539975 ZBTB7CA1YPR0 619 aa8.82□□□□□ -1
SNHG1-212ENST00000539975 PTPREP23469 700 aa8.82□□□□□ -1
SNHG1-212ENST00000539975 CABLES1Q8TDN4 633 aa8.82□□□□□ -1
SNHG1-212ENST00000539975 DDX12PQ92771 950 aa8.82□□□□□ -1
SNHG1-212ENST00000539975 C8orf37Q96NL8 207 aa8.82□□□□□ -1
SNHG1-212ENST00000539975 USP32Q8NFA0 1604 aa8.82□□□□□ -1
SNHG1-212ENST00000539975 C11orf95C9JLR9 678 aaPredicted RBP8.81□□□□□ -1
SNHG1-212ENST00000539975 GCP02774 474 aa8.81□□□□□ -1
SNHG1-212ENST00000539975 LSM11P83369 360 aaKnown RBP eCLIP8.81□□□□□ -11e-6■□□□□ 9.9
SNHG1-212ENST00000539975 ZNF772Q68DY9 489 aaPredicted RBP8.81□□□□□ -1
SNHG1-212ENST00000539975 ADAM33Q9BZ11 813 aa8.81□□□□□ -1
SNHG1-212ENST00000539975 PRDM11Q9NQV5 511 aa8.81□□□□□ -1
SNHG1-212ENST00000539975 CCDC7Q96M83 1385 aa8.81□□□□□ -1
SNHG1-212ENST00000539975 WASHC2AQ641Q2 1341 aa8.8□□□□□ -1
SNHG1-212ENST00000539975 COL16A1Q07092 1604 aaPredicted RBP8.8□□□□□ -1
SNHG1-212ENST00000539975 NHSL1Q5SYE7 1610 aa8.8□□□□□ -1
SNHG1-212ENST00000539975 EVA1CP58658 441 aa8.8□□□□□ -1
SNHG1-212ENST00000539975 POTEEQ6S8J3 1075 aa8.8□□□□□ -1
SNHG1-212ENST00000539975 NME9Q86XW9 330 aa8.8□□□□□ -1
SNHG1-212ENST00000539975 TK2O00142 265 aa8.79□□□□□ -1
SNHG1-212ENST00000539975 ZC3H6P61129 1189 aaKnown RBP8.79□□□□□ -1
SNHG1-212ENST00000539975 NBR1Q14596 966 aa8.79□□□□□ -1
SNHG1-212ENST00000539975 KCNK17Q96T54 332 aa8.79□□□□□ -1
SNHG1-212ENST00000539975 GGNBP2Q9H3C7 697 aa8.79□□□□□ -1
SNHG1-212ENST00000539975 CCDC9Q9Y3X0 531 aaKnown RBP8.79□□□□□ -1
SNHG1-212ENST00000539975 NSD3Q9BZ95 1437 aa8.79□□□□□ -1
SNHG1-212ENST00000539975 GRXCR2A6NFK2 248 aa8.78□□□□□ -1
SNHG1-212ENST00000539975 FYB1O15117 783 aa8.78□□□□□ -1
SNHG1-212ENST00000539975 AMPHP49418 695 aa8.78□□□□□ -1
SNHG1-212ENST00000539975 EN1Q05925 392 aaPredicted RBP8.78□□□□□ -1
SNHG1-212ENST00000539975 MORC1Q86VD1 984 aa8.78□□□□□ -1
SNHG1-212ENST00000539975 CARD14Q9BXL6 1004 aa8.78□□□□□ -1
SNHG1-212ENST00000539975 SLC4A5Q9BY07 1137 aa8.78□□□□□ -1
SNHG1-212ENST00000539975 USP21Q9UK80 565 aa8.78□□□□□ -1
SNHG1-212ENST00000539975 AXIN2Q9Y2T1 843 aa8.78□□□□□ -1
SNHG1-212ENST00000539975 RGPD8O14715 1765 aaPredicted RBP8.78□□□□□ -1
SNHG1-212ENST00000539975 TOPAZ1Q8N9V7 1692 aa8.78□□□□□ -1
SNHG1-212ENST00000539975 OSBPP22059 807 aa8.77□□□□□ -1.01
SNHG1-212ENST00000539975 CNGB1Q14028 1251 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-212ENST00000539975 SMYD5Q6GMV2 418 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms