RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 HSPA2P54652 639 aa12.77□□□□□ -0.37
MDH1-215ENST00000539945 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.37
MDH1-215ENST00000539945 CCDC146Q8IYE0 955 aa12.77□□□□□ -0.37
MDH1-215ENST00000539945 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.372e-8■■□□□ 14.2
MDH1-215ENST00000539945 SALL2Q9Y467 1007 aaPredicted RBP12.77□□□□□ -0.37
MDH1-215ENST00000539945 SUPT16HQ9Y5B9 1047 aaKnown RBP12.77□□□□□ -0.37
MDH1-215ENST00000539945 RUNDC1Q96C34 613 aa12.76□□□□□ -0.37
MDH1-215ENST00000539945 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
MDH1-215ENST00000539945 MAP2P11137 1827 aaKnown RBP12.76□□□□□ -0.37
MDH1-215ENST00000539945 NCOA3Q9Y6Q9 1424 aa12.75□□□□□ -0.37
MDH1-215ENST00000539945 USP31Q70CQ4 1352 aa12.75□□□□□ -0.37
MDH1-215ENST00000539945 APAF1O14727 1248 aa12.75□□□□□ -0.37
MDH1-215ENST00000539945 DIAPH1O60610 1272 aaKnown RBP12.75□□□□□ -0.37
MDH1-215ENST00000539945 C14orf37Q86TY3 774 aa12.75□□□□□ -0.37
MDH1-215ENST00000539945 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
MDH1-215ENST00000539945 CDK12Q9NYV4 1490 aaPredicted RBP12.75□□□□□ -0.37
MDH1-215ENST00000539945 U2AF1L5P0DN76 240 aaPredicted RBP12.74□□□□□ -0.37
MDH1-215ENST00000539945 U2AF1Q01081 240 aaKnown RBP eCLIP12.74□□□□□ -0.37
MDH1-215ENST00000539945 C19orf44Q9H6X5 657 aa12.74□□□□□ -0.37
MDH1-215ENST00000539945 FBLN1P23142 703 aa12.73□□□□□ -0.37
MDH1-215ENST00000539945 STRCP1A6NGW2 1772 aa12.73□□□□□ -0.37
MDH1-215ENST00000539945 STRCQ7RTU9 1775 aa12.73□□□□□ -0.37
MDH1-215ENST00000539945 NUDT7P0C024 238 aa12.72□□□□□ -0.37
MDH1-215ENST00000539945 FBXO22Q8NEZ5 403 aa12.72□□□□□ -0.37
MDH1-215ENST00000539945 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
MDH1-215ENST00000539945 PLA2G2EQ9NZK7 142 aa12.72□□□□□ -0.37
MDH1-215ENST00000539945 EMILIN1Q9Y6C2 1016 aa12.72□□□□□ -0.37
MDH1-215ENST00000539945 IQSEC2Q5JU85 1478 aa12.72□□□□□ -0.37
MDH1-215ENST00000539945 RNF123Q5XPI4 1314 aa12.72□□□□□ -0.37
MDH1-215ENST00000539945 USP54Q70EL1 1684 aa12.72□□□□□ -0.37
MDH1-215ENST00000539945 U2SURPO15042 1029 aaKnown RBP12.71□□□□□ -0.37
MDH1-215ENST00000539945 PPM1GO15355 546 aaPredicted RBP12.71□□□□□ -0.37
MDH1-215ENST00000539945 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.37
MDH1-215ENST00000539945 PNNQ9H307 717 aaKnown RBP12.71□□□□□ -0.37
MDH1-215ENST00000539945 PIK3C2AO00443 1686 aa12.71□□□□□ -0.37
MDH1-215ENST00000539945 PSDA5PKW4 1024 aaPredicted RBP12.71□□□□□ -0.38
MDH1-215ENST00000539945 ESCO1Q5FWF5 840 aa12.71□□□□□ -0.38
MDH1-215ENST00000539945 TCP11L2Q8N4U5 519 aa12.71□□□□□ -0.38
MDH1-215ENST00000539945 DCCP43146 1447 aa12.7□□□□□ -0.38
MDH1-215ENST00000539945 TMEM94Q12767 1356 aa12.7□□□□□ -0.38
MDH1-215ENST00000539945 LRRC7Q96NW7 1537 aa12.7□□□□□ -0.38
MDH1-215ENST00000539945 FCHSD2O94868 740 aa12.7□□□□□ -0.38
MDH1-215ENST00000539945 IL13P35225 146 aa12.7□□□□□ -0.38
MDH1-215ENST00000539945 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
MDH1-215ENST00000539945 CCDC27Q2M243 656 aa12.7□□□□□ -0.38
MDH1-215ENST00000539945 ERICH6BQ5W0A0 696 aa12.7□□□□□ -0.38
MDH1-215ENST00000539945 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
MDH1-215ENST00000539945 C2orf72A6NCS6 295 aa12.69□□□□□ -0.38
MDH1-215ENST00000539945 KIF3CO14782 793 aa12.69□□□□□ -0.38
MDH1-215ENST00000539945 SLC34A2O95436 690 aa12.69□□□□□ -0.38
MDH1-215ENST00000539945 SLFN5Q08AF3 891 aa12.69□□□□□ -0.38
MDH1-215ENST00000539945 WWC1Q8IX03 1113 aa12.69□□□□□ -0.38
MDH1-215ENST00000539945 TRMT2AQ8IZ69 625 aaKnown RBP12.69□□□□□ -0.38
MDH1-215ENST00000539945 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
MDH1-215ENST00000539945 DUSP27Q5VZP5 1158 aa12.68□□□□□ -0.38
MDH1-215ENST00000539945 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
MDH1-215ENST00000539945 C1orf167Q5SNV9 1468 aa12.68□□□□□ -0.38
MDH1-215ENST00000539945 MARF1Q9Y4F3 1742 aaKnown RBP12.67□□□□□ -0.38
MDH1-215ENST00000539945 E9PSI1 815 aa12.67□□□□□ -0.38
MDH1-215ENST00000539945 ATF3P18847 181 aa12.67□□□□□ -0.38
MDH1-215ENST00000539945 PSME1Q06323 249 aa12.67□□□□□ -0.38
MDH1-215ENST00000539945 ABTB2Q8N961 1025 aa12.67□□□□□ -0.38
MDH1-215ENST00000539945 ORAI2Q96SN7 254 aa12.67□□□□□ -0.38
MDH1-215ENST00000539945 RCAN3Q9UKA8 241 aa12.67□□□□□ -0.38
MDH1-215ENST00000539945 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
MDH1-215ENST00000539945 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
MDH1-215ENST00000539945 KIF24Q5T7B8 1368 aa12.66□□□□□ -0.38
MDH1-215ENST00000539945 WDR63Q8IWG1 891 aa12.66□□□□□ -0.38
MDH1-215ENST00000539945 TMC2Q8TDI7 906 aa12.66□□□□□ -0.38
MDH1-215ENST00000539945 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
MDH1-215ENST00000539945 MST1RQ04912 1400 aa12.66□□□□□ -0.38
MDH1-215ENST00000539945 MAPK8IP3Q9UPT6 1336 aa12.66□□□□□ -0.38
MDH1-215ENST00000539945 SBNO1A3KN83 1393 aa12.65□□□□□ -0.38
MDH1-215ENST00000539945 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
MDH1-215ENST00000539945 RRP7AQ9Y3A4 280 aaKnown RBP12.65□□□□□ -0.38
MDH1-215ENST00000539945 PEAK1Q9H792 1746 aa12.65□□□□□ -0.38
MDH1-215ENST00000539945 MAP3K19Q56UN5 1328 aa12.65□□□□□ -0.38
MDH1-215ENST00000539945 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
MDH1-215ENST00000539945 FLT4P35916 1363 aa12.64□□□□□ -0.39
MDH1-215ENST00000539945 MSH6P52701 1360 aa12.64□□□□□ -0.39
MDH1-215ENST00000539945 FOXO3O43524 673 aa12.63□□□□□ -0.39
MDH1-215ENST00000539945 PRKAR2BP31323 418 aa12.63□□□□□ -0.39
MDH1-215ENST00000539945 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
MDH1-215ENST00000539945 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
MDH1-215ENST00000539945 MFRPQ9BY79 579 aa12.63□□□□□ -0.39
MDH1-215ENST00000539945 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
MDH1-215ENST00000539945 XIRP1Q702N8 1843 aaKnown RBP12.63□□□□□ -0.39
MDH1-215ENST00000539945 ARHGAP33O14559 1287 aa12.62□□□□□ -0.39
MDH1-215ENST00000539945 NEFMP07197 916 aa12.62□□□□□ -0.39
MDH1-215ENST00000539945 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
MDH1-215ENST00000539945 TRPM3Q9HCF6 1732 aaPredicted RBP12.62□□□□□ -0.39
MDH1-215ENST00000539945 IRX6P78412 446 aaPredicted RBP12.62□□□□□ -0.39
MDH1-215ENST00000539945 NUTM2GQ5VZR2 741 aa12.62□□□□□ -0.39
MDH1-215ENST00000539945 ADGRD1Q6QNK2 874 aa12.62□□□□□ -0.39
MDH1-215ENST00000539945 KRT28Q7Z3Y7 464 aa12.62□□□□□ -0.39
MDH1-215ENST00000539945 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
MDH1-215ENST00000539945 STK25O00506 426 aa12.61□□□□□ -0.39
MDH1-215ENST00000539945 HMOX1P09601 288 aa12.61□□□□□ -0.39
MDH1-215ENST00000539945 AMPHP49418 695 aa12.61□□□□□ -0.39
MDH1-215ENST00000539945 RRP1P56182 461 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms