RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 VPS72Q15906 364 aa13.18□□□□□ -0.3
CCDC144NL-203ENST00000539484 DCAF11Q8TEB1 546 aa13.18□□□□□ -0.3
CCDC144NL-203ENST00000539484 HIRIP3Q9BW71 556 aaPredicted RBP13.18□□□□□ -0.3
CCDC144NL-203ENST00000539484 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
CCDC144NL-203ENST00000539484 ITSN1Q15811 1721 aa13.18□□□□□ -0.3
CCDC144NL-203ENST00000539484 MINK1Q8N4C8 1332 aaPredicted RBP13.17□□□□□ -0.3
CCDC144NL-203ENST00000539484 BLMP54132 1417 aaPredicted RBP13.17□□□□□ -0.3
CCDC144NL-203ENST00000539484 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
CCDC144NL-203ENST00000539484 NGDNQ8NEJ9 315 aaKnown RBP13.16□□□□□ -0.3
CCDC144NL-203ENST00000539484 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
CCDC144NL-203ENST00000539484 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
CCDC144NL-203ENST00000539484 KRT27Q7Z3Y8 459 aa13.15□□□□□ -0.3
CCDC144NL-203ENST00000539484 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
CCDC144NL-203ENST00000539484 ALS2Q96Q42 1657 aa13.15□□□□□ -0.31
CCDC144NL-203ENST00000539484 COL14A1Q05707 1796 aaKnown RBP13.15□□□□□ -0.31
CCDC144NL-203ENST00000539484 TULP4Q9NRJ4 1543 aa13.14□□□□□ -0.31
CCDC144NL-203ENST00000539484 WASLO00401 505 aaPredicted RBP13.14□□□□□ -0.31
CCDC144NL-203ENST00000539484 ARHGEF28Q8N1W1 1705 aaKnown RBP13.13□□□□□ -0.31
CCDC144NL-203ENST00000539484 FAM83GA6ND36 823 aa13.13□□□□□ -0.31
CCDC144NL-203ENST00000539484 BTG4Q9NY30 223 aa13.13□□□□□ -0.31
CCDC144NL-203ENST00000539484 NRAPQ86VF7 1730 aa13.13□□□□□ -0.31
CCDC144NL-203ENST00000539484 THSD4Q6ZMP0 1018 aa13.12□□□□□ -0.31
CCDC144NL-203ENST00000539484 GPHNQ9NQX3 736 aaPredicted RBP13.12□□□□□ -0.31
CCDC144NL-203ENST00000539484 GOLGA8CPA6NN73 597 aa13.11□□□□□ -0.31
CCDC144NL-203ENST00000539484 BAG6P46379 1132 aa13.11□□□□□ -0.31
CCDC144NL-203ENST00000539484 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
CCDC144NL-203ENST00000539484 ONECUT3O60422 494 aaPredicted RBP13.1□□□□□ -0.31
CCDC144NL-203ENST00000539484 HRCP23327 699 aa13.1□□□□□ -0.31
CCDC144NL-203ENST00000539484 DSG2Q14126 1118 aa13.1□□□□□ -0.31
CCDC144NL-203ENST00000539484 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
CCDC144NL-203ENST00000539484 SLC4A5Q9BY07 1137 aa13.1□□□□□ -0.31
CCDC144NL-203ENST00000539484 PRDM11Q9NQV5 511 aa13.1□□□□□ -0.31
CCDC144NL-203ENST00000539484 EP400Q96L91 3159 aa13.1□□□□□ -0.31
CCDC144NL-203ENST00000539484 PRR36Q9H6K5 1346 aa13.1□□□□□ -0.31
CCDC144NL-203ENST00000539484 RGPD1P0DJD0 1748 aa13.09□□□□□ -0.31
CCDC144NL-203ENST00000539484 CRYBG1Q9Y4K1 1723 aa13.08□□□□□ -0.32
CCDC144NL-203ENST00000539484 NUDT16Q96DE0 195 aaKnown RBP13.08□□□□□ -0.32
CCDC144NL-203ENST00000539484 KIAA1210Q9ULL0 1709 aa13.08□□□□□ -0.32
CCDC144NL-203ENST00000539484 ZNF454Q8N9F8 522 aa13.07□□□□□ -0.32
CCDC144NL-203ENST00000539484 WNT2BQ93097 391 aa13.07□□□□□ -0.32
CCDC144NL-203ENST00000539484 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
CCDC144NL-203ENST00000539484 CDK19Q9BWU1 502 aa13.06□□□□□ -0.32
CCDC144NL-203ENST00000539484 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
CCDC144NL-203ENST00000539484 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
CCDC144NL-203ENST00000539484 ATP7BP35670 1465 aa13.05□□□□□ -0.32
CCDC144NL-203ENST00000539484 RGL2O15211 777 aa13.05□□□□□ -0.32
CCDC144NL-203ENST00000539484 STRN4Q9NRL3 753 aa13.05□□□□□ -0.32
CCDC144NL-203ENST00000539484 SPATA31A5Q5VU36 1347 aa13.05□□□□□ -0.32
CCDC144NL-203ENST00000539484 SPATA31A7Q8IWB4 1347 aa13.05□□□□□ -0.32
CCDC144NL-203ENST00000539484 EVA1CP58658 441 aa13.04□□□□□ -0.32
CCDC144NL-203ENST00000539484 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
CCDC144NL-203ENST00000539484 TOPAZ1Q8N9V7 1692 aa13.03□□□□□ -0.32
CCDC144NL-203ENST00000539484 ZC3H6P61129 1189 aaKnown RBP13.03□□□□□ -0.32
CCDC144NL-203ENST00000539484 CHRNA2Q15822 529 aa13.03□□□□□ -0.32
CCDC144NL-203ENST00000539484 NUTM2GQ5VZR2 741 aa13.03□□□□□ -0.32
CCDC144NL-203ENST00000539484 KIAA0232Q92628 1395 aa13.03□□□□□ -0.32
CCDC144NL-203ENST00000539484 ABTB2Q8N961 1025 aa13.02□□□□□ -0.33
CCDC144NL-203ENST00000539484 ACEP12821 1306 aa13.02□□□□□ -0.33
CCDC144NL-203ENST00000539484 THSD7AQ9UPZ6 1657 aa13.02□□□□□ -0.33
CCDC144NL-203ENST00000539484 PTPREP23469 700 aa13.01□□□□□ -0.33
CCDC144NL-203ENST00000539484 SRPK2P78362 688 aaKnown RBP13.01□□□□□ -0.33
CCDC144NL-203ENST00000539484 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
CCDC144NL-203ENST00000539484 NBPF8Q3BBV2 869 aa13.01□□□□□ -0.33
CCDC144NL-203ENST00000539484 FAM182BQ5T319 152 aa13.01□□□□□ -0.33
CCDC144NL-203ENST00000539484 LRP5O75197 1615 aa13.01□□□□□ -0.33
CCDC144NL-203ENST00000539484 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
CCDC144NL-203ENST00000539484 SPATA31A1Q5TZJ5 1347 aa13□□□□□ -0.33
CCDC144NL-203ENST00000539484 NLRP13Q86W25 1043 aa13□□□□□ -0.33
CCDC144NL-203ENST00000539484 OXER1Q8TDS5 423 aa13□□□□□ -0.33
CCDC144NL-203ENST00000539484 USP35Q9P2H5 1018 aa13□□□□□ -0.33
CCDC144NL-203ENST00000539484 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
CCDC144NL-203ENST00000539484 PLEKHG3A1L390 1219 aa12.99□□□□□ -0.33
CCDC144NL-203ENST00000539484 PDE3BQ13370 1112 aa12.99□□□□□ -0.33
CCDC144NL-203ENST00000539484 FAM196AQ6ZSG2 479 aa12.99□□□□□ -0.33
CCDC144NL-203ENST00000539484 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
CCDC144NL-203ENST00000539484 QRICH2Q9H0J4 1663 aa12.99□□□□□ -0.33
CCDC144NL-203ENST00000539484 CENPJQ9HC77 1338 aaPredicted RBP12.98□□□□□ -0.33
CCDC144NL-203ENST00000539484 TRIM37O94972 964 aa12.97□□□□□ -0.33
CCDC144NL-203ENST00000539484 NBPF1Q3BBV0 1214 aa12.97□□□□□ -0.33
CCDC144NL-203ENST00000539484 NRKQ7Z2Y5 1582 aa12.97□□□□□ -0.33
CCDC144NL-203ENST00000539484 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.33
CCDC144NL-203ENST00000539484 SSH2Q76I76 1423 aa12.96□□□□□ -0.33
CCDC144NL-203ENST00000539484 ZBTB7CA1YPR0 619 aa12.96□□□□□ -0.33
CCDC144NL-203ENST00000539484 Q6ZNB5 142 aa12.96□□□□□ -0.33
CCDC144NL-203ENST00000539484 BARGINQ6ZT62 677 aa12.96□□□□□ -0.33
CCDC144NL-203ENST00000539484 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
CCDC144NL-203ENST00000539484 APBA3O96018 575 aa12.95□□□□□ -0.34
CCDC144NL-203ENST00000539484 FOSBP53539 338 aa12.95□□□□□ -0.34
CCDC144NL-203ENST00000539484 EZH2Q15910 746 aaKnown RBP12.95□□□□□ -0.34
CCDC144NL-203ENST00000539484 TCP11L2Q8N4U5 519 aa12.95□□□□□ -0.34
CCDC144NL-203ENST00000539484 NBPF3Q9H094 633 aa12.95□□□□□ -0.34
CCDC144NL-203ENST00000539484 DISP2A7MBM2 1401 aa12.95□□□□□ -0.34
CCDC144NL-203ENST00000539484 CPDO75976 1380 aa12.94□□□□□ -0.34
CCDC144NL-203ENST00000539484 GCP02774 474 aa12.94□□□□□ -0.34
CCDC144NL-203ENST00000539484 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
CCDC144NL-203ENST00000539484 THRAP3Q9Y2W1 955 aaKnown RBP12.94□□□□□ -0.34
CCDC144NL-203ENST00000539484 USP19O94966 1318 aa12.93□□□□□ -0.34
CCDC144NL-203ENST00000539484 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
CCDC144NL-203ENST00000539484 CAMTA1Q9Y6Y1 1673 aa12.93□□□□□ -0.34
CCDC144NL-203ENST00000539484 C11orf95C9JLR9 678 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms