RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 DIAPH3Q9NSV4 1193 aa21.7■■□□□ 1.06
TRA2A-211ENST00000538367 MYO5BQ9ULV0 1848 aa21.69■■□□□ 1.06
TRA2A-211ENST00000538367 CDC42BPGQ6DT37 1551 aa21.69■■□□□ 1.06
TRA2A-211ENST00000538367 PKP1Q13835 747 aa21.69■■□□□ 1.06
TRA2A-211ENST00000538367 CASC1Q6TDU7 716 aa21.69■■□□□ 1.06
TRA2A-211ENST00000538367 IDI1Q13907 227 aa21.68■■□□□ 1.06
TRA2A-211ENST00000538367 TPM3P06753 285 aa21.68■■□□□ 1.06
TRA2A-211ENST00000538367 GSPT1P15170 499 aaKnown RBP21.68■■□□□ 1.06
TRA2A-211ENST00000538367 TTC22Q5TAA0 569 aa21.68■■□□□ 1.06
TRA2A-211ENST00000538367 ARID3AQ99856 593 aa21.67■■□□□ 1.06
TRA2A-211ENST00000538367 TMEM131LA2VDJ0 1609 aa21.67■■□□□ 1.06
TRA2A-211ENST00000538367 ANKRD7Q92527 254 aa21.67■■□□□ 1.06
TRA2A-211ENST00000538367 ABCC4O15439 1325 aa21.66■■□□□ 1.06
TRA2A-211ENST00000538367 CBX1P83916 185 aa21.66■■□□□ 1.06
TRA2A-211ENST00000538367 PDCL2Q8N4E4 241 aa21.66■■□□□ 1.06
TRA2A-211ENST00000538367 REC8O95072 547 aa21.65■■□□□ 1.06
TRA2A-211ENST00000538367 BRD1O95696 1058 aa21.65■■□□□ 1.06
TRA2A-211ENST00000538367 SYCP1Q15431 976 aa21.65■■□□□ 1.06
TRA2A-211ENST00000538367 PLEKHM2Q8IWE5 1019 aa21.65■■□□□ 1.06
TRA2A-211ENST00000538367 RPGRIP1LQ68CZ1 1315 aa21.65■■□□□ 1.06
TRA2A-211ENST00000538367 ADGRB1O14514 1584 aa21.65■■□□□ 1.06
TRA2A-211ENST00000538367 CHAF1AQ13111 956 aaPredicted RBP21.64■■□□□ 1.06
TRA2A-211ENST00000538367 ATP2B3Q16720 1220 aa21.64■■□□□ 1.06
TRA2A-211ENST00000538367 BCL2L12Q9HB09 334 aa21.64■■□□□ 1.06
TRA2A-211ENST00000538367 ADGRF5Q8IZF2 1346 aa21.64■■□□□ 1.05
TRA2A-211ENST00000538367 C3P01024 1663 aa21.63■■□□□ 1.05
TRA2A-211ENST00000538367 ZGPATQ8N5A5 531 aaKnown RBP21.63■■□□□ 1.05
TRA2A-211ENST00000538367 INTS4Q96HW7 963 aaKnown RBP21.63■■□□□ 1.05
TRA2A-211ENST00000538367 SLC12A5Q9H2X9 1139 aa21.63■■□□□ 1.05
TRA2A-211ENST00000538367 ATAD2Q6PL18 1390 aa21.63■■□□□ 1.05
TRA2A-211ENST00000538367 RNF214Q8ND24 703 aa21.62■■□□□ 1.05
TRA2A-211ENST00000538367 CTIFO43310 598 aaKnown RBP21.62■■□□□ 1.05
TRA2A-211ENST00000538367 GABPB1Q06547 395 aaPredicted RBP21.62■■□□□ 1.05
TRA2A-211ENST00000538367 NEXMIFQ5QGS0 1516 aa21.62■■□□□ 1.05
TRA2A-211ENST00000538367 SIRT2Q8IXJ6 389 aa21.61■■□□□ 1.05
TRA2A-211ENST00000538367 NSFL1CQ9UNZ2 370 aaKnown RBP21.61■■□□□ 1.05
TRA2A-211ENST00000538367 CUL4AQ13619 759 aa21.61■■□□□ 1.05
TRA2A-211ENST00000538367 DCTPP1Q9H773 170 aa21.6■■□□□ 1.05
TRA2A-211ENST00000538367 GTF2E1P29083 439 aaPredicted RBP21.59■■□□□ 1.05
TRA2A-211ENST00000538367 MRPL50Q8N5N7 158 aaKnown RBP21.59■■□□□ 1.05
TRA2A-211ENST00000538367 TMEM87AQ8NBN3 555 aa21.59■■□□□ 1.05
TRA2A-211ENST00000538367 BBXQ8WY36 941 aaPredicted RBP21.59■■□□□ 1.05
TRA2A-211ENST00000538367 OGFRQ9NZT2 677 aa21.59■■□□□ 1.05
TRA2A-211ENST00000538367 TNRQ92752 1358 aa21.58■■□□□ 1.05
TRA2A-211ENST00000538367 KNDC1Q76NI1 1749 aa21.58■■□□□ 1.05
TRA2A-211ENST00000538367 PDE4CQ08493 712 aa21.58■■□□□ 1.04
TRA2A-211ENST00000538367 STAG3Q9UJ98 1225 aa21.56■■□□□ 1.04
TRA2A-211ENST00000538367 TULP4Q9NRJ4 1543 aa21.56■■□□□ 1.04
TRA2A-211ENST00000538367 CCDC183Q5T5S1 534 aa21.56■■□□□ 1.04
TRA2A-211ENST00000538367 API5Q9BZZ5 524 aaKnown RBP21.56■■□□□ 1.04
TRA2A-211ENST00000538367 ZFYVE9O95405 1425 aa21.55■■□□□ 1.04
TRA2A-211ENST00000538367 PNPLA6Q8IY17 1366 aa21.55■■□□□ 1.04
TRA2A-211ENST00000538367 RIMS1Q86UR5 1692 aaKnown RBP21.55■■□□□ 1.04
TRA2A-211ENST00000538367 ADCY5O95622 1261 aa21.55■■□□□ 1.04
TRA2A-211ENST00000538367 KIAA1524Q8TCG1 905 aa21.55■■□□□ 1.04
TRA2A-211ENST00000538367 IL17RAQ96F46 866 aa21.55■■□□□ 1.04
TRA2A-211ENST00000538367 ARHGEF28Q8N1W1 1705 aaKnown RBP21.54■■□□□ 1.04
TRA2A-211ENST00000538367 ERC2O15083 957 aa21.54■■□□□ 1.04
TRA2A-211ENST00000538367 VGFO15240 615 aaPredicted RBP21.54■■□□□ 1.04
TRA2A-211ENST00000538367 A2ML1A8K2U0 1454 aa21.54■■□□□ 1.04
TRA2A-211ENST00000538367 ADAMTSL3P82987 1691 aa21.54■■□□□ 1.04
TRA2A-211ENST00000538367 EVC2Q86UK5 1308 aa21.54■■□□□ 1.04
TRA2A-211ENST00000538367 FAM193AP78312 1265 aa21.53■■□□□ 1.04
TRA2A-211ENST00000538367 TMX3Q96JJ7 454 aa21.53■■□□□ 1.04
TRA2A-211ENST00000538367 C14orf93Q9H972 538 aaKnown RBP21.53■■□□□ 1.04
TRA2A-211ENST00000538367 USP25Q9UHP3 1055 aa21.53■■□□□ 1.04
TRA2A-211ENST00000538367 FAM135BQ49AJ0 1406 aa21.53■■□□□ 1.04
TRA2A-211ENST00000538367 LRRC7Q96NW7 1537 aa21.53■■□□□ 1.04
TRA2A-211ENST00000538367 ANAPC15P60006 121 aa21.52■■□□□ 1.04
TRA2A-211ENST00000538367 GOLGA6L6A8MZA4 724 aa21.52■■□□□ 1.03
TRA2A-211ENST00000538367 U2SURPO15042 1029 aaKnown RBP21.52■■□□□ 1.03
TRA2A-211ENST00000538367 CEBPAP49715 358 aaPredicted RBP21.52■■□□□ 1.03
TRA2A-211ENST00000538367 RTL1A6NKG5 1358 aa21.51■■□□□ 1.03
TRA2A-211ENST00000538367 KDM4AO75164 1064 aa21.51■■□□□ 1.03
TRA2A-211ENST00000538367 VAMP4O75379 141 aa21.51■■□□□ 1.03
TRA2A-211ENST00000538367 SDSP20132 328 aa21.51■■□□□ 1.03
TRA2A-211ENST00000538367 TSC1Q92574 1164 aa21.51■■□□□ 1.03
TRA2A-211ENST00000538367 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
TRA2A-211ENST00000538367 TMEM51Q9NW97 253 aa21.51■■□□□ 1.03
TRA2A-211ENST00000538367 WDR33Q9C0J8 1336 aaKnown RBP21.51■■□□□ 1.03
TRA2A-211ENST00000538367 UBR1Q8IWV7 1749 aa21.5■■□□□ 1.03
TRA2A-211ENST00000538367 TTC12Q9H892 705 aaPredicted RBP21.5■■□□□ 1.03
TRA2A-211ENST00000538367 SSH2Q76I76 1423 aa21.5■■□□□ 1.03
TRA2A-211ENST00000538367 RIOK3O14730 519 aaKnown RBP21.5■■□□□ 1.03
TRA2A-211ENST00000538367 FCHSD2O94868 740 aa21.5■■□□□ 1.03
TRA2A-211ENST00000538367 CREBRFQ8IUR6 639 aa21.49■■□□□ 1.03
TRA2A-211ENST00000538367 RGS12O14924 1447 aa21.49■■□□□ 1.03
TRA2A-211ENST00000538367 ATP10DQ9P241 1426 aa21.49■■□□□ 1.03
TRA2A-211ENST00000538367 MX1P20591 662 aa21.49■■□□□ 1.03
TRA2A-211ENST00000538367 NUTM2DQ5VT03 806 aaPredicted RBP21.49■■□□□ 1.03
TRA2A-211ENST00000538367 RPAP2Q8IXW5 612 aaPredicted RBP21.49■■□□□ 1.03
TRA2A-211ENST00000538367 ANKRD44Q8N8A2 993 aa21.49■■□□□ 1.03
TRA2A-211ENST00000538367 JARID2Q92833 1246 aaPredicted RBP21.49■■□□□ 1.03
TRA2A-211ENST00000538367 CCDC66A2RUB6 948 aa21.48■■□□□ 1.03
TRA2A-211ENST00000538367 MCCP23508 829 aa21.48■■□□□ 1.03
TRA2A-211ENST00000538367 SLC20A2Q08357 652 aa21.48■■□□□ 1.03
TRA2A-211ENST00000538367 IFT57Q9NWB7 429 aa21.48■■□□□ 1.03
TRA2A-211ENST00000538367 CGNQ9P2M7 1197 aaKnown RBP21.48■■□□□ 1.03
TRA2A-211ENST00000538367 EPB41L2O43491 1005 aaKnown RBP21.47■■□□□ 1.03
TRA2A-211ENST00000538367 U2AF2P26368 475 aaKnown RBP eCLIP21.47■■□□□ 1.033e-7■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms