RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 ANKRD36BQ8N2N9 1353 aa12.46□□□□□ -0.41
SMAD3-203ENST00000537194 USP47Q96K76 1375 aa12.46□□□□□ -0.41
SMAD3-203ENST00000537194 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
SMAD3-203ENST00000537194 TATP17735 454 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-203ENST00000537194 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
SMAD3-203ENST00000537194 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-203ENST00000537194 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
SMAD3-203ENST00000537194 LRRC4BQ9NT99 713 aa12.46□□□□□ -0.41
SMAD3-203ENST00000537194 CCNL1Q9UK58 526 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-203ENST00000537194 PAPPAQ13219 1627 aa12.45□□□□□ -0.42
SMAD3-203ENST00000537194 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
SMAD3-203ENST00000537194 TESK2Q96S53 571 aa12.45□□□□□ -0.42
SMAD3-203ENST00000537194 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
SMAD3-203ENST00000537194 RRS1Q15050 365 aaKnown RBP12.44□□□□□ -0.42
SMAD3-203ENST00000537194 DOT1LQ8TEK3 1739 aa12.43□□□□□ -0.42
SMAD3-203ENST00000537194 GGNBP2Q9H3C7 697 aa12.43□□□□□ -0.42
SMAD3-203ENST00000537194 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
SMAD3-203ENST00000537194 PNPLA7Q6ZV29 1317 aa12.42□□□□□ -0.42
SMAD3-203ENST00000537194 PCDH11XQ9BZA7 1347 aa12.42□□□□□ -0.42
SMAD3-203ENST00000537194 PCDH11YQ9BZA8 1340 aa12.42□□□□□ -0.42
SMAD3-203ENST00000537194 FYB1O15117 783 aa12.42□□□□□ -0.42
SMAD3-203ENST00000537194 FLAD1Q8NFF5 587 aa12.42□□□□□ -0.42
SMAD3-203ENST00000537194 GRIN3BO60391 1043 aa12.41□□□□□ -0.42
SMAD3-203ENST00000537194 FBLN1P23142 703 aa12.41□□□□□ -0.42
SMAD3-203ENST00000537194 KCNQ4P56696 695 aa12.41□□□□□ -0.42
SMAD3-203ENST00000537194 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
SMAD3-203ENST00000537194 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-203ENST00000537194 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
SMAD3-203ENST00000537194 FLT4P35916 1363 aa12.41□□□□□ -0.42
SMAD3-203ENST00000537194 KIF24Q5T7B8 1368 aa12.41□□□□□ -0.42
SMAD3-203ENST00000537194 LY75O60449 1722 aa12.4□□□□□ -0.42
SMAD3-203ENST00000537194 USHBP1Q8N6Y0 703 aa12.4□□□□□ -0.42
SMAD3-203ENST00000537194 MEGF6O75095 1541 aa12.4□□□□□ -0.42
SMAD3-203ENST00000537194 INSRP06213 1382 aa12.4□□□□□ -0.42
SMAD3-203ENST00000537194 KIF20BQ96Q89 1820 aa12.39□□□□□ -0.43
SMAD3-203ENST00000537194 MPRIPQ6WCQ1 1025 aa12.39□□□□□ -0.43
SMAD3-203ENST00000537194 SENP3-EIF4A1A0A087X0R7 540 aa12.38□□□□□ -0.43
SMAD3-203ENST00000537194 PPM1GO15355 546 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-203ENST00000537194 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-203ENST00000537194 AK7Q96M32 723 aa12.38□□□□□ -0.43
SMAD3-203ENST00000537194 SPG7Q9UQ90 795 aa12.38□□□□□ -0.43
SMAD3-203ENST00000537194 TUBGCP6Q96RT7 1819 aa12.38□□□□□ -0.43
SMAD3-203ENST00000537194 C1QTNF8P60827 252 aa12.37□□□□□ -0.43
SMAD3-203ENST00000537194 HSP90AB2PQ58FF8 381 aa12.37□□□□□ -0.43
SMAD3-203ENST00000537194 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
SMAD3-203ENST00000537194 NSD3Q9BZ95 1437 aa12.37□□□□□ -0.43
SMAD3-203ENST00000537194 NSD2O96028 1365 aa12.36□□□□□ -0.43
SMAD3-203ENST00000537194 PALLDQ8WX93 1383 aa12.36□□□□□ -0.43
SMAD3-203ENST00000537194 TRIM26Q12899 539 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-203ENST00000537194 COL23A1Q86Y22 540 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-203ENST00000537194 COL24A1Q17RW2 1714 aa12.35□□□□□ -0.43
SMAD3-203ENST00000537194 CD2APQ9Y5K6 639 aa12.35□□□□□ -0.43
SMAD3-203ENST00000537194 C5P01031 1676 aa12.35□□□□□ -0.43
SMAD3-203ENST00000537194 MSL1Q68DK7 614 aa12.34□□□□□ -0.43
SMAD3-203ENST00000537194 NLGN2Q8NFZ4 835 aa12.34□□□□□ -0.43
SMAD3-203ENST00000537194 POLR3GLQ9BT43 218 aa12.34□□□□□ -0.43
SMAD3-203ENST00000537194 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
SMAD3-203ENST00000537194 MAP2P11137 1827 aaKnown RBP12.33□□□□□ -0.44
SMAD3-203ENST00000537194 ITGB4P16144 1822 aa12.33□□□□□ -0.44
SMAD3-203ENST00000537194 TMOD3Q9NYL9 352 aa12.33□□□□□ -0.44
SMAD3-203ENST00000537194 EMILIN1Q9Y6C2 1016 aa12.33□□□□□ -0.44
SMAD3-203ENST00000537194 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
SMAD3-203ENST00000537194 UTRNP46939 3433 aa12.32□□□□□ -0.44
SMAD3-203ENST00000537194 CYP27B1O15528 508 aa12.32□□□□□ -0.44
SMAD3-203ENST00000537194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.443e-7■□□□□ 8.4
SMAD3-203ENST00000537194 PHF14O94880 888 aa12.31□□□□□ -0.44
SMAD3-203ENST00000537194 IFNL2Q8IZJ0 200 aa12.31□□□□□ -0.44
SMAD3-203ENST00000537194 WASHC2AQ641Q2 1341 aa12.31□□□□□ -0.44
SMAD3-203ENST00000537194 SSFA2P28290 1259 aa12.3□□□□□ -0.44
SMAD3-203ENST00000537194 PIGBQ92521 554 aa12.3□□□□□ -0.44
SMAD3-203ENST00000537194 C4BP0C0L5 1744 aa12.29□□□□□ -0.44
SMAD3-203ENST00000537194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.29□□□□□ -0.44
SMAD3-203ENST00000537194 LOC102724428A0A0B4J2F2 783 aa12.29□□□□□ -0.44
SMAD3-203ENST00000537194 HSP90AB1P08238 724 aaKnown RBP12.29□□□□□ -0.44
SMAD3-203ENST00000537194 YBX3P16989 372 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMAD3-203ENST00000537194 SIK1P57059 783 aa12.29□□□□□ -0.44
SMAD3-203ENST00000537194 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-203ENST00000537194 CARD14Q9BXL6 1004 aa12.29□□□□□ -0.44
SMAD3-203ENST00000537194 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
SMAD3-203ENST00000537194 ATP6V1AP38606 617 aa12.28□□□□□ -0.44
SMAD3-203ENST00000537194 EYA1Q99502 592 aa12.28□□□□□ -0.44
SMAD3-203ENST00000537194 GPBP1L1Q9HC44 474 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-203ENST00000537194 GNPATO15228 680 aa12.27□□□□□ -0.45
SMAD3-203ENST00000537194 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-203ENST00000537194 UBR3Q6ZT12 1888 aa12.27□□□□□ -0.45
SMAD3-203ENST00000537194 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
SMAD3-203ENST00000537194 PHKG2P15735 406 aa12.25□□□□□ -0.45
SMAD3-203ENST00000537194 PLEKHO1Q53GL0 409 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-203ENST00000537194 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
SMAD3-203ENST00000537194 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
SMAD3-203ENST00000537194 RTCBQ9Y3I0 505 aaKnown RBP12.25□□□□□ -0.45
SMAD3-203ENST00000537194 IGSF1Q8N6C5 1336 aa12.25□□□□□ -0.45
SMAD3-203ENST00000537194 PLEKHG2Q9H7P9 1386 aa12.25□□□□□ -0.45
SMAD3-203ENST00000537194 TOGARAM1Q9Y4F4 1720 aa12.25□□□□□ -0.45
SMAD3-203ENST00000537194 ERVV-2B6SEH9 535 aa12.24□□□□□ -0.45
SMAD3-203ENST00000537194 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMAD3-203ENST00000537194 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
SMAD3-203ENST00000537194 TRAPPC3LQ5T215 181 aa12.24□□□□□ -0.45
SMAD3-203ENST00000537194 LINC00116Q8NCU8 138 aa12.24□□□□□ -0.45
SMAD3-203ENST00000537194 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms