RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 CCDC7Q96M83 1385 aa14.33□□□□□ -0.12
CPSF7-217ENST00000537162 NLRP6P59044 892 aa14.32□□□□□ -0.12
CPSF7-217ENST00000537162 TNRC6CQ9HCJ0 1690 aaKnown RBP14.32□□□□□ -0.12
CPSF7-217ENST00000537162 DOT1LQ8TEK3 1739 aa14.32□□□□□ -0.12
CPSF7-217ENST00000537162 ADRA2BP18089 450 aa14.31□□□□□ -0.12
CPSF7-217ENST00000537162 ARHGEF25Q86VW2 580 aa14.31□□□□□ -0.12
CPSF7-217ENST00000537162 SMC1BQ8NDV3 1235 aa14.31□□□□□ -0.12
CPSF7-217ENST00000537162 PRDM10Q9NQV6 1147 aa14.31□□□□□ -0.12
CPSF7-217ENST00000537162 CCDC61Q9Y6R9 512 aa14.31□□□□□ -0.12
CPSF7-217ENST00000537162 NSD2O96028 1365 aa14.31□□□□□ -0.12
CPSF7-217ENST00000537162 C10orf71Q711Q0 1435 aa14.31□□□□□ -0.12
CPSF7-217ENST00000537162 C5P01031 1676 aa14.3□□□□□ -0.12
CPSF7-217ENST00000537162 ARHGAP27Q6ZUM4 889 aa14.3□□□□□ -0.12
CPSF7-217ENST00000537162 CCNL1Q9UK58 526 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-217ENST00000537162 ERBB3P21860 1342 aa14.3□□□□□ -0.12
CPSF7-217ENST00000537162 TOGARAM1Q9Y4F4 1720 aa14.29□□□□□ -0.12
CPSF7-217ENST00000537162 C9orf131Q5VYM1 1079 aa14.29□□□□□ -0.12
CPSF7-217ENST00000537162 AMIGO3Q86WK7 504 aa14.29□□□□□ -0.12
CPSF7-217ENST00000537162 PXDNLA1KZ92 1463 aa14.29□□□□□ -0.12
CPSF7-217ENST00000537162 RGS19P49795 217 aa14.28□□□□□ -0.12
CPSF7-217ENST00000537162 SOX12O15370 315 aa14.27□□□□□ -0.13
CPSF7-217ENST00000537162 PRIM1P49642 420 aaKnown RBP14.27□□□□□ -0.13
CPSF7-217ENST00000537162 SYTL4Q96C24 671 aaPredicted RBP14.27□□□□□ -0.13
CPSF7-217ENST00000537162 BCS1LQ9Y276 419 aa14.27□□□□□ -0.13
CPSF7-217ENST00000537162 TAF1LQ8IZX4 1826 aa14.27□□□□□ -0.13
CPSF7-217ENST00000537162 KIF13BQ9NQT8 1826 aa14.27□□□□□ -0.13
CPSF7-217ENST00000537162 IL2RBP14784 551 aa14.26□□□□□ -0.13
CPSF7-217ENST00000537162 MKRN1Q9UHC7 482 aaKnown RBP14.26□□□□□ -0.13
CPSF7-217ENST00000537162 BRCA1P38398 1863 aaKnown RBP14.25□□□□□ -0.13
CPSF7-217ENST00000537162 PLEKHG2Q9H7P9 1386 aa14.24□□□□□ -0.13
CPSF7-217ENST00000537162 KDM2BQ8NHM5 1336 aa14.24□□□□□ -0.13
CPSF7-217ENST00000537162 DDX54Q8TDD1 881 aaKnown RBP14.24□□□□□ -0.13
CPSF7-217ENST00000537162 NFAT5O94916 1531 aa14.24□□□□□ -0.13
CPSF7-217ENST00000537162 A0A0G2JLW4 131 aa14.23□□□□□ -0.13
CPSF7-217ENST00000537162 CCDC85CA6NKD9 419 aa14.23□□□□□ -0.13
CPSF7-217ENST00000537162 LBX1P52954 281 aa14.23□□□□□ -0.13
CPSF7-217ENST00000537162 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
CPSF7-217ENST00000537162 ANKRD36BQ8N2N9 1353 aa14.22□□□□□ -0.13
CPSF7-217ENST00000537162 CTCFP49711 727 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-217ENST00000537162 UBR3Q6ZT12 1888 aa14.22□□□□□ -0.13
CPSF7-217ENST00000537162 SBF1O95248 1867 aa14.21□□□□□ -0.13
CPSF7-217ENST00000537162 ARFGEF1Q9Y6D6 1849 aa14.2□□□□□ -0.14
CPSF7-217ENST00000537162 RNF181Q9P0P0 153 aa14.2□□□□□ -0.14
CPSF7-217ENST00000537162 C4BP0C0L5 1744 aa14.2□□□□□ -0.14
CPSF7-217ENST00000537162 PHF14O94880 888 aa14.19□□□□□ -0.14
CPSF7-217ENST00000537162 FCHSD2O94868 740 aa14.18□□□□□ -0.14
CPSF7-217ENST00000537162 FLAD1Q8NFF5 587 aa14.18□□□□□ -0.14
CPSF7-217ENST00000537162 VIRMAQ69YN4 1812 aaKnown RBP14.18□□□□□ -0.14
CPSF7-217ENST00000537162 DPEP1P16444 411 aa14.16□□□□□ -0.14
CPSF7-217ENST00000537162 KCNH5Q8NCM2 988 aa14.16□□□□□ -0.14
CPSF7-217ENST00000537162 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
CPSF7-217ENST00000537162 USP47Q96K76 1375 aa14.16□□□□□ -0.14
CPSF7-217ENST00000537162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.15□□□□□ -0.14
CPSF7-217ENST00000537162 HSPA8P11142 646 aaKnown RBP14.15□□□□□ -0.14
CPSF7-217ENST00000537162 AIDAQ96BJ3 306 aa14.15□□□□□ -0.14
CPSF7-217ENST00000537162 MPHOSPH9Q99550 1183 aa14.15□□□□□ -0.14
CPSF7-217ENST00000537162 CABP1Q9NZU7 370 aa14.15□□□□□ -0.14
CPSF7-217ENST00000537162 LTN1O94822 1766 aa14.14□□□□□ -0.15
CPSF7-217ENST00000537162 CNTNAP1P78357 1384 aa14.14□□□□□ -0.15
CPSF7-217ENST00000537162 KCNA3P22001 575 aa14.14□□□□□ -0.15
CPSF7-217ENST00000537162 TGFB2P61812 414 aa14.14□□□□□ -0.15
CPSF7-217ENST00000537162 PPARGC1BQ86YN6 1023 aaKnown RBP14.14□□□□□ -0.15
CPSF7-217ENST00000537162 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
CPSF7-217ENST00000537162 WBP1LQ9NX94 342 aa14.14□□□□□ -0.15
CPSF7-217ENST00000537162 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
CPSF7-217ENST00000537162 MMP10P09238 476 aa14.13□□□□□ -0.15
CPSF7-217ENST00000537162 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
CPSF7-217ENST00000537162 POTECB2RU33 542 aa14.12□□□□□ -0.15
CPSF7-217ENST00000537162 VEGFAP15692 232 aaPredicted RBP14.12□□□□□ -0.15
CPSF7-217ENST00000537162 VEGFBP49765 207 aa14.12□□□□□ -0.15
CPSF7-217ENST00000537162 ANKRD24Q8TF21 1146 aa14.12□□□□□ -0.15
CPSF7-217ENST00000537162 AK7Q96M32 723 aa14.11□□□□□ -0.15
CPSF7-217ENST00000537162 TTC21BQ7Z4L5 1316 aa14.11□□□□□ -0.15
CPSF7-217ENST00000537162 DCAF5Q96JK2 942 aa14.1□□□□□ -0.15
CPSF7-217ENST00000537162 CFAP44Q96MT7 982 aa14.09□□□□□ -0.15
CPSF7-217ENST00000537162 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
CPSF7-217ENST00000537162 TIAM2Q8IVF5 1701 aa14.08□□□□□ -0.16
CPSF7-217ENST00000537162 GLTPD2A6NH11 291 aa14.08□□□□□ -0.16
CPSF7-217ENST00000537162 RASSF7Q02833 373 aa14.08□□□□□ -0.16
CPSF7-217ENST00000537162 FAM208AQ9UK61 1670 aaKnown RBP14.07□□□□□ -0.16
CPSF7-217ENST00000537162 RGPD2P0DJD1 1756 aa14.07□□□□□ -0.16
CPSF7-217ENST00000537162 PDE4DIPQ5VU43 2346 aa14.07□□□□□ -0.16
CPSF7-217ENST00000537162 C4AP0C0L4 1744 aa14.07□□□□□ -0.16
CPSF7-217ENST00000537162 POTEIP0CG38 1075 aa14.06□□□□□ -0.16
CPSF7-217ENST00000537162 POTEJP0CG39 1038 aa14.06□□□□□ -0.16
CPSF7-217ENST00000537162 DCAF11Q8TEB1 546 aa14.06□□□□□ -0.16
CPSF7-217ENST00000537162 KDM6AO15550 1401 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-217ENST00000537162 CCDC88AQ3V6T2 1871 aa14.06□□□□□ -0.16
CPSF7-217ENST00000537162 SSFA2P28290 1259 aa14.05□□□□□ -0.16
CPSF7-217ENST00000537162 MAP2P11137 1827 aaKnown RBP14.05□□□□□ -0.16
CPSF7-217ENST00000537162 MEGF6O75095 1541 aa14.05□□□□□ -0.16
CPSF7-217ENST00000537162 LINC00116Q8NCU8 138 aa14.04□□□□□ -0.16
CPSF7-217ENST00000537162 ZCRB1Q8TBF4 217 aaKnown RBP14.03□□□□□ -0.16
CPSF7-217ENST00000537162 PIM2Q9P1W9 311 aa14.03□□□□□ -0.16
CPSF7-217ENST00000537162 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
CPSF7-217ENST00000537162 ITGB4P16144 1822 aa14.03□□□□□ -0.16
CPSF7-217ENST00000537162 DALRD3Q5D0E6 543 aaKnown RBP14.02□□□□□ -0.17
CPSF7-217ENST00000537162 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
CPSF7-217ENST00000537162 LTV1Q96GA3 475 aaPredicted RBP14.02□□□□□ -0.17
CPSF7-217ENST00000537162 PASKQ96RG2 1323 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms