RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 FSD2A1L4K1 749 aa7.28□□□□□ -1.24
CHD4-206ENST00000536999 ZBTB7AO95365 584 aa7.28□□□□□ -1.24
CHD4-206ENST00000536999 CALD1Q05682 793 aaKnown RBP7.28□□□□□ -1.24
CHD4-206ENST00000536999 HDAC1Q13547 482 aaPredicted RBP7.28□□□□□ -1.24
CHD4-206ENST00000536999 RGL3Q3MIN7 710 aa7.28□□□□□ -1.24
CHD4-206ENST00000536999 METP08581 1390 aa7.28□□□□□ -1.24
CHD4-206ENST00000536999 IBTKQ9P2D0 1353 aaPredicted RBP7.28□□□□□ -1.24
CHD4-206ENST00000536999 IL16Q14005 1332 aa7.27□□□□□ -1.24
CHD4-206ENST00000536999 NCLP19338 710 aaKnown RBP7.27□□□□□ -1.25
CHD4-206ENST00000536999 MCM5P33992 734 aa7.27□□□□□ -1.25
CHD4-206ENST00000536999 CCDC173Q0VFZ6 552 aa7.27□□□□□ -1.25
CHD4-206ENST00000536999 CSPP1Q1MSJ5 1256 aa7.27□□□□□ -1.25
CHD4-206ENST00000536999 ZKSCAN2Q63HK3 967 aa7.27□□□□□ -1.25
CHD4-206ENST00000536999 TNS4Q8IZW8 715 aa7.27□□□□□ -1.25
CHD4-206ENST00000536999 C22orf23Q9BZE7 217 aa7.27□□□□□ -1.25
CHD4-206ENST00000536999 PDCL3Q9H2J4 239 aa7.27□□□□□ -1.25
CHD4-206ENST00000536999 ANTXR1Q9H6X2 564 aa7.27□□□□□ -1.25
CHD4-206ENST00000536999 RTN4Q9NQC3 1192 aaKnown RBP7.27□□□□□ -1.25
CHD4-206ENST00000536999 ABCC11Q96J66 1382 aa7.27□□□□□ -1.25
CHD4-206ENST00000536999 NUP188Q5SRE5 1749 aa7.27□□□□□ -1.25
CHD4-206ENST00000536999 MYOM1P52179 1685 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 PLCH1Q4KWH8 1693 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 RREB1Q92766 1687 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 APAF1O14727 1248 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 TRAK2O60296 914 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 COL13A1Q5TAT6 717 aaPredicted RBP7.26□□□□□ -1.25
CHD4-206ENST00000536999 FTSJ3Q8IY81 847 aaKnown RBP7.26□□□□□ -1.25
CHD4-206ENST00000536999 CABLES1Q8TDN4 633 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 NWD2Q9ULI1 1742 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 KIAA1210Q9ULL0 1709 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 DLC1Q96QB1 1528 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 SPATA31A3Q5VYP0 1347 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 RPGRIP1LQ68CZ1 1315 aa7.26□□□□□ -1.25
CHD4-206ENST00000536999 PLEKHH1Q9ULM0 1364 aa7.25□□□□□ -1.25
CHD4-206ENST00000536999 PTGER2P43116 358 aa7.25□□□□□ -1.25
CHD4-206ENST00000536999 NUCB2P80303 420 aa7.25□□□□□ -1.25
CHD4-206ENST00000536999 NBPF1Q3BBV0 1214 aa7.25□□□□□ -1.25
CHD4-206ENST00000536999 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.25□□□□□ -1.25
CHD4-206ENST00000536999 WWC1Q8IX03 1113 aa7.25□□□□□ -1.25
CHD4-206ENST00000536999 NAP1L5Q96NT1 182 aaPredicted RBP7.25□□□□□ -1.25
CHD4-206ENST00000536999 CWC22Q9HCG8 908 aaKnown RBP7.25□□□□□ -1.25
CHD4-206ENST00000536999 BTG4Q9NY30 223 aa7.25□□□□□ -1.25
CHD4-206ENST00000536999 ESPNB1AK53 854 aa7.24□□□□□ -1.25
CHD4-206ENST00000536999 MSNP26038 577 aaKnown RBP7.24□□□□□ -1.25
CHD4-206ENST00000536999 RBM25P49756 843 aaKnown RBP7.24□□□□□ -1.25
CHD4-206ENST00000536999 RARSP54136 660 aaKnown RBP7.24□□□□□ -1.25
CHD4-206ENST00000536999 MVPQ14764 893 aaKnown RBP7.24□□□□□ -1.25
CHD4-206ENST00000536999 C20orf194Q5TEA3 1177 aa7.24□□□□□ -1.25
CHD4-206ENST00000536999 LMOD2Q6P5Q4 547 aa7.24□□□□□ -1.25
CHD4-206ENST00000536999 CLEC17AQ6ZS10 378 aa7.24□□□□□ -1.25
CHD4-206ENST00000536999 SMC5Q8IY18 1101 aa7.24□□□□□ -1.25
CHD4-206ENST00000536999 DZIP1LQ8IYY4 767 aaKnown RBP7.24□□□□□ -1.25
CHD4-206ENST00000536999 GCC1Q96CN9 775 aa7.24□□□□□ -1.25
CHD4-206ENST00000536999 GRPEL1Q9HAV7 217 aa7.24□□□□□ -1.25
CHD4-206ENST00000536999 BRPF1P55201 1214 aaPredicted RBP7.23□□□□□ -1.25
CHD4-206ENST00000536999 ALDH1L2Q3SY69 923 aa7.23□□□□□ -1.25
CHD4-206ENST00000536999 CASC1Q6TDU7 716 aa7.23□□□□□ -1.25
CHD4-206ENST00000536999 MORC1Q86VD1 984 aa7.23□□□□□ -1.25
CHD4-206ENST00000536999 TBC1D2Q9BYX2 928 aa7.23□□□□□ -1.25
CHD4-206ENST00000536999 GPBP1L1Q9HC44 474 aaPredicted RBP7.23□□□□□ -1.25
CHD4-206ENST00000536999 SPATA31A5Q5VU36 1347 aa7.23□□□□□ -1.25
CHD4-206ENST00000536999 SPATA31A7Q8IWB4 1347 aa7.23□□□□□ -1.25
CHD4-206ENST00000536999 NRXN3Q9Y4C0 1643 aa7.23□□□□□ -1.25
CHD4-206ENST00000536999 SHANK3Q9BYB0 1731 aa7.22□□□□□ -1.25
CHD4-206ENST00000536999 NUTM2FA1L443 756 aa7.22□□□□□ -1.25
CHD4-206ENST00000536999 XRCC6P12956 609 aaKnown RBP eCLIP7.22□□□□□ -1.25
CHD4-206ENST00000536999 SLC4A3P48751 1232 aa7.22□□□□□ -1.25
CHD4-206ENST00000536999 KRT28Q7Z3Y7 464 aa7.22□□□□□ -1.25
CHD4-206ENST00000536999 ARHGAP45Q92619 1136 aa7.22□□□□□ -1.25
CHD4-206ENST00000536999 BCL11BQ9C0K0 894 aaPredicted RBP7.22□□□□□ -1.25
CHD4-206ENST00000536999 PDGFDQ9GZP0 370 aaPredicted RBP7.22□□□□□ -1.25
CHD4-206ENST00000536999 NEXMIFQ5QGS0 1516 aa7.22□□□□□ -1.25
CHD4-206ENST00000536999 ROBO2Q9HCK4 1378 aa7.21□□□□□ -1.25
CHD4-206ENST00000536999 HSP90AB1P08238 724 aaKnown RBP7.21□□□□□ -1.26
CHD4-206ENST00000536999 PDIA4P13667 645 aaKnown RBP7.21□□□□□ -1.26
CHD4-206ENST00000536999 MCM2P49736 904 aa7.21□□□□□ -1.26
CHD4-206ENST00000536999 APLP1P51693 650 aa7.21□□□□□ -1.26
CHD4-206ENST00000536999 BMP2KLQ5H9B9 411 aa7.21□□□□□ -1.26
CHD4-206ENST00000536999 ARXQ96QS3 562 aa7.21□□□□□ -1.26
CHD4-206ENST00000536999 SLKQ9H2G2 1235 aaPredicted RBP7.21□□□□□ -1.26
CHD4-206ENST00000536999 PDZRN3Q9UPQ7 1066 aa7.21□□□□□ -1.26
CHD4-206ENST00000536999 USP19O94966 1318 aa7.21□□□□□ -1.26
CHD4-206ENST00000536999 VIRMAQ69YN4 1812 aaKnown RBP7.2□□□□□ -1.26
CHD4-206ENST00000536999 TNS3Q68CZ2 1445 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 ATP10DQ9P241 1426 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 THSD7AQ9UPZ6 1657 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 BCAR3O75815 825 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 PHF14O94880 888 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 IGHDP01880 384 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 PSME1Q06323 249 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 ZSCAN30Q86W11 494 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 ZNF526Q8TF50 670 aaPredicted RBP7.2□□□□□ -1.26
CHD4-206ENST00000536999 SYAP1Q96A49 352 aaPredicted RBP7.2□□□□□ -1.26
CHD4-206ENST00000536999 PPP1R9BQ96SB3 815 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 MTFR1LQ9H019 292 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 POGKQ9P215 609 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 COG6Q9Y2V7 657 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 CASZ1Q86V15 1759 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 ARHGEF10O15013 1369 aa7.2□□□□□ -1.26
CHD4-206ENST00000536999 KIF24Q5T7B8 1368 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms