RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 MCM5P33992 734 aa17.75■□□□□ 0.43
CDH20-202ENST00000536675 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDH20-202ENST00000536675 ATP10DQ9P241 1426 aa17.75■□□□□ 0.43
CDH20-202ENST00000536675 SMARCA5O60264 1052 aaPredicted RBP17.75■□□□□ 0.43
CDH20-202ENST00000536675 CSPP1Q1MSJ5 1256 aa17.75■□□□□ 0.43
CDH20-202ENST00000536675 ANKRD44Q8N8A2 993 aa17.75■□□□□ 0.43
CDH20-202ENST00000536675 YTHDC2Q9H6S0 1430 aaKnown RBP17.74■□□□□ 0.43
CDH20-202ENST00000536675 CASC1Q6TDU7 716 aa17.74■□□□□ 0.43
CDH20-202ENST00000536675 CCDC39Q9UFE4 941 aa17.74■□□□□ 0.43
CDH20-202ENST00000536675 FOXD4L5Q5VV16 416 aaPredicted RBP17.74■□□□□ 0.43
CDH20-202ENST00000536675 FOXD4L4Q8WXT5 416 aaPredicted RBP17.74■□□□□ 0.43
CDH20-202ENST00000536675 CDK19Q9BWU1 502 aa17.74■□□□□ 0.43
CDH20-202ENST00000536675 APBB1O00213 710 aa17.73■□□□□ 0.43
CDH20-202ENST00000536675 IDI1Q13907 227 aa17.73■□□□□ 0.43
CDH20-202ENST00000536675 ASXL2Q76L83 1435 aa17.72■□□□□ 0.43
CDH20-202ENST00000536675 REC8O95072 547 aa17.72■□□□□ 0.43
CDH20-202ENST00000536675 DYNC1I1O14576 645 aa17.72■□□□□ 0.43
CDH20-202ENST00000536675 CEP85Q6P2H3 762 aa17.72■□□□□ 0.43
CDH20-202ENST00000536675 RNF214Q8ND24 703 aa17.72■□□□□ 0.43
CDH20-202ENST00000536675 FAM83GA6ND36 823 aa17.71■□□□□ 0.43
CDH20-202ENST00000536675 IL13P35225 146 aa17.71■□□□□ 0.43
CDH20-202ENST00000536675 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.43
CDH20-202ENST00000536675 MLH3Q9UHC1 1453 aa17.71■□□□□ 0.43
CDH20-202ENST00000536675 POGZQ7Z3K3 1410 aa17.71■□□□□ 0.42
CDH20-202ENST00000536675 ERC2O15083 957 aa17.7■□□□□ 0.42
CDH20-202ENST00000536675 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
CDH20-202ENST00000536675 RPAP2Q8IXW5 612 aaPredicted RBP17.7■□□□□ 0.42
CDH20-202ENST00000536675 RIMS2Q9UQ26 1411 aa17.7■□□□□ 0.42
CDH20-202ENST00000536675 MBD3O95983 291 aa17.7■□□□□ 0.42
CDH20-202ENST00000536675 PRDM4Q9UKN5 801 aa17.7■□□□□ 0.42
CDH20-202ENST00000536675 ARHGEF40Q8TER5 1519 aa17.7■□□□□ 0.42
CDH20-202ENST00000536675 DCTN1Q14203 1278 aa17.69■□□□□ 0.42
CDH20-202ENST00000536675 RGS12O14924 1447 aa17.69■□□□□ 0.42
CDH20-202ENST00000536675 TMX3Q96JJ7 454 aa17.69■□□□□ 0.42
CDH20-202ENST00000536675 LMOD3Q0VAK6 560 aa17.68■□□□□ 0.42
CDH20-202ENST00000536675 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
CDH20-202ENST00000536675 NEK4P51957 841 aa17.68■□□□□ 0.42
CDH20-202ENST00000536675 MSH6P52701 1360 aa17.67■□□□□ 0.42
CDH20-202ENST00000536675 BRD1O95696 1058 aa17.67■□□□□ 0.42
CDH20-202ENST00000536675 MTERF4Q7Z6M4 381 aaKnown RBP17.66■□□□□ 0.42
CDH20-202ENST00000536675 ARID3AQ99856 593 aa17.66■□□□□ 0.42
CDH20-202ENST00000536675 TSPY26PQ9H489 355 aa17.66■□□□□ 0.42
CDH20-202ENST00000536675 KRT24Q2M2I5 525 aa17.66■□□□□ 0.42
CDH20-202ENST00000536675 MEIS3Q99687 375 aa17.65■□□□□ 0.42
CDH20-202ENST00000536675 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDH20-202ENST00000536675 TCHHQ07283 1943 aa17.65■□□□□ 0.42
CDH20-202ENST00000536675 PTMAP06454 111 aaKnown RBP17.65■□□□□ 0.42
CDH20-202ENST00000536675 TMEM131LA2VDJ0 1609 aa17.64■□□□□ 0.41
CDH20-202ENST00000536675 CPSF1Q10570 1443 aaKnown RBP17.64■□□□□ 0.41
CDH20-202ENST00000536675 CDK12Q9NYV4 1490 aaPredicted RBP17.64■□□□□ 0.41
CDH20-202ENST00000536675 KIAA2012Q0VF49 1180 aa17.64■□□□□ 0.41
CDH20-202ENST00000536675 ATP7BP35670 1465 aa17.63■□□□□ 0.41
CDH20-202ENST00000536675 CUL4AQ13619 759 aa17.63■□□□□ 0.41
CDH20-202ENST00000536675 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
CDH20-202ENST00000536675 ZRANB1Q9UGI0 708 aa17.63■□□□□ 0.41
CDH20-202ENST00000536675 PDE1AP54750 535 aa17.62■□□□□ 0.41
CDH20-202ENST00000536675 OSBPL3Q9H4L5 887 aa17.62■□□□□ 0.41
CDH20-202ENST00000536675 TUBGCP6Q96RT7 1819 aa17.62■□□□□ 0.41
CDH20-202ENST00000536675 MCM2P49736 904 aa17.62■□□□□ 0.41
CDH20-202ENST00000536675 NME9Q86XW9 330 aa17.62■□□□□ 0.41
CDH20-202ENST00000536675 ALKQ9UM73 1620 aa17.62■□□□□ 0.41
CDH20-202ENST00000536675 NOL8Q76FK4 1167 aaKnown RBP17.61■□□□□ 0.41
CDH20-202ENST00000536675 SMAP1Q8IYB5 467 aaPredicted RBP17.61■□□□□ 0.41
CDH20-202ENST00000536675 SYAP1Q96A49 352 aaPredicted RBP17.61■□□□□ 0.41
CDH20-202ENST00000536675 PALD1Q9ULE6 856 aa17.61■□□□□ 0.41
CDH20-202ENST00000536675 ZBTB7CA1YPR0 619 aa17.61■□□□□ 0.41
CDH20-202ENST00000536675 GADD45BO75293 160 aaPredicted RBP17.61■□□□□ 0.41
CDH20-202ENST00000536675 FOXD4L6Q3SYB3 417 aaPredicted RBP17.6■□□□□ 0.41
CDH20-202ENST00000536675 TSHZ3Q63HK5 1081 aa17.6■□□□□ 0.41
CDH20-202ENST00000536675 FOXD4L3Q6VB84 417 aaPredicted RBP17.6■□□□□ 0.41
CDH20-202ENST00000536675 ESYT1Q9BSJ8 1104 aa17.6■□□□□ 0.41
CDH20-202ENST00000536675 GDPD2Q9HCC8 539 aa17.6■□□□□ 0.41
CDH20-202ENST00000536675 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
CDH20-202ENST00000536675 MPNDQ8N594 471 aa17.59■□□□□ 0.41
CDH20-202ENST00000536675 MYRIPQ8NFW9 859 aa17.59■□□□□ 0.41
CDH20-202ENST00000536675 INTS4Q96HW7 963 aaKnown RBP17.59■□□□□ 0.41
CDH20-202ENST00000536675 PTPRCP08575 1304 aa17.59■□□□□ 0.41
CDH20-202ENST00000536675 WAPLQ7Z5K2 1190 aa17.58■□□□□ 0.41
CDH20-202ENST00000536675 JARID2Q92833 1246 aaPredicted RBP17.58■□□□□ 0.41
CDH20-202ENST00000536675 HMMRO75330 724 aa17.58■□□□□ 0.4
CDH20-202ENST00000536675 ZNF830Q96NB3 372 aaPredicted RBP17.58■□□□□ 0.4
CDH20-202ENST00000536675 PREX1Q8TCU6 1659 aa17.58■□□□□ 0.4
CDH20-202ENST00000536675 AATKQ6ZMQ8 1374 aa17.58■□□□□ 0.4
CDH20-202ENST00000536675 DNTTIP2Q5QJE6 756 aaKnown RBP17.58■□□□□ 0.4
CDH20-202ENST00000536675 USP48Q86UV5 1035 aa17.58■□□□□ 0.4
CDH20-202ENST00000536675 CHL1O00533 1208 aa17.57■□□□□ 0.4
CDH20-202ENST00000536675 CCDC94Q9BW85 323 aaPredicted RBP17.57■□□□□ 0.4
CDH20-202ENST00000536675 PHF14O94880 888 aa17.57■□□□□ 0.4
CDH20-202ENST00000536675 HAP1P54257 671 aaPredicted RBP17.57■□□□□ 0.4
CDH20-202ENST00000536675 EDC4Q6P2E9 1401 aaKnown RBP17.57■□□□□ 0.4
CDH20-202ENST00000536675 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.57■□□□□ 0.4
CDH20-202ENST00000536675 MCCP23508 829 aa17.56■□□□□ 0.4
CDH20-202ENST00000536675 PRDM10Q9NQV6 1147 aa17.56■□□□□ 0.4
CDH20-202ENST00000536675 PIBF1Q8WXW3 757 aa17.56■□□□□ 0.4
CDH20-202ENST00000536675 RAPGEF3O95398 923 aa17.55■□□□□ 0.4
CDH20-202ENST00000536675 ANAPC15P60006 121 aa17.55■□□□□ 0.4
CDH20-202ENST00000536675 MCM10Q7L590 875 aa17.55■□□□□ 0.4
CDH20-202ENST00000536675 AEBP1Q8IUX7 1158 aa17.55■□□□□ 0.4
CDH20-202ENST00000536675 TSC1Q92574 1164 aa17.55■□□□□ 0.4
CDH20-202ENST00000536675 SALL3Q9BXA9 1300 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms