RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 SYTL4Q96C24 671 aaPredicted RBP7.6□□□□□ -1.19
CHD4-205ENST00000536301 FAM208AQ9UK61 1670 aaKnown RBP7.6□□□□□ -1.19
CHD4-205ENST00000536301 TAF1LQ8IZX4 1826 aa7.59□□□□□ -1.19
CHD4-205ENST00000536301 TTC21AQ8NDW8 1320 aa7.59□□□□□ -1.19
CHD4-205ENST00000536301 TOGARAM1Q9Y4F4 1720 aa7.59□□□□□ -1.19
CHD4-205ENST00000536301 DNAJC5GQ8N7S2 189 aa7.59□□□□□ -1.19
CHD4-205ENST00000536301 LTV1Q96GA3 475 aaPredicted RBP7.59□□□□□ -1.19
CHD4-205ENST00000536301 CD163L1Q9NR16 1453 aa7.59□□□□□ -1.19
CHD4-205ENST00000536301 USP31Q70CQ4 1352 aa7.59□□□□□ -1.2
CHD4-205ENST00000536301 KTN1Q86UP2 1357 aaKnown RBP7.59□□□□□ -1.2
CHD4-205ENST00000536301 C5P01031 1676 aa7.58□□□□□ -1.2
CHD4-205ENST00000536301 CAPN15O75808 1086 aa7.58□□□□□ -1.2
CHD4-205ENST00000536301 HTRA3P83110 453 aa7.58□□□□□ -1.2
CHD4-205ENST00000536301 CCNL1Q9UK58 526 aaPredicted RBP7.58□□□□□ -1.2
CHD4-205ENST00000536301 ANKRD36BQ8N2N9 1353 aa7.58□□□□□ -1.2
CHD4-205ENST00000536301 SBNO2Q9Y2G9 1366 aa7.58□□□□□ -1.2
CHD4-205ENST00000536301 MEGF6O75095 1541 aa7.57□□□□□ -1.2
CHD4-205ENST00000536301 PCNTO95613 3336 aa7.57□□□□□ -1.2
CHD4-205ENST00000536301 EVC2Q86UK5 1308 aa7.57□□□□□ -1.2
CHD4-205ENST00000536301 IGSF1Q8N6C5 1336 aa7.57□□□□□ -1.2
CHD4-205ENST00000536301 FBLN1P23142 703 aa7.57□□□□□ -1.2
CHD4-205ENST00000536301 COL13A1Q5TAT6 717 aaPredicted RBP7.57□□□□□ -1.2
CHD4-205ENST00000536301 ZNF692Q9BU19 519 aaPredicted RBP7.57□□□□□ -1.2
CHD4-205ENST00000536301 UBR3Q6ZT12 1888 aa7.56□□□□□ -1.2
CHD4-205ENST00000536301 WDR90Q96KV7 1748 aa7.56□□□□□ -1.2
CHD4-205ENST00000536301 KIAA1551Q9HCM1 1747 aa7.56□□□□□ -1.2
CHD4-205ENST00000536301 CD2APQ9Y5K6 639 aa7.56□□□□□ -1.2
CHD4-205ENST00000536301 N4BP2Q86UW6 1770 aaPredicted RBP7.55□□□□□ -1.2
CHD4-205ENST00000536301 CICQ96RK0 1608 aaPredicted RBP7.55□□□□□ -1.2
CHD4-205ENST00000536301 C4BP0C0L5 1744 aa7.55□□□□□ -1.2
CHD4-205ENST00000536301 ITGB4P16144 1822 aa7.55□□□□□ -1.2
CHD4-205ENST00000536301 APLP1P51693 650 aa7.54□□□□□ -1.2
CHD4-205ENST00000536301 USHBP1Q8N6Y0 703 aa7.54□□□□□ -1.2
CHD4-205ENST00000536301 IP6K1Q92551 441 aa7.54□□□□□ -1.2
CHD4-205ENST00000536301 NMRK2Q9NPI5 230 aa7.54□□□□□ -1.2
CHD4-205ENST00000536301 MAP2P11137 1827 aaKnown RBP7.53□□□□□ -1.2
CHD4-205ENST00000536301 PHF14O94880 888 aa7.53□□□□□ -1.2
CHD4-205ENST00000536301 ZCRB1Q8TBF4 217 aaKnown RBP7.53□□□□□ -1.2
CHD4-205ENST00000536301 L3MBTL2Q969R5 705 aa7.53□□□□□ -1.2
CHD4-205ENST00000536301 SLC12A5Q9H2X9 1139 aa7.53□□□□□ -1.2
CHD4-205ENST00000536301 USP47Q96K76 1375 aa7.53□□□□□ -1.2
CHD4-205ENST00000536301 MAP3K19Q56UN5 1328 aa7.52□□□□□ -1.2
CHD4-205ENST00000536301 PALLDQ8WX93 1383 aa7.52□□□□□ -1.21
CHD4-205ENST00000536301 KIF13BQ9NQT8 1826 aa7.52□□□□□ -1.21
CHD4-205ENST00000536301 PXDNLA1KZ92 1463 aa7.51□□□□□ -1.21
CHD4-205ENST00000536301 A0A1W2PP64 1363 aa7.51□□□□□ -1.21
CHD4-205ENST00000536301 TOMM70O94826 608 aa7.51□□□□□ -1.21
CHD4-205ENST00000536301 HOXC9P31274 260 aa7.51□□□□□ -1.21
CHD4-205ENST00000536301 NBPF6Q5VWK0 638 aa7.51□□□□□ -1.21
CHD4-205ENST00000536301 TMC1Q8TDI8 760 aa7.51□□□□□ -1.21
CHD4-205ENST00000536301 NBPF4Q96M43 638 aa7.51□□□□□ -1.21
CHD4-205ENST00000536301 BRCA1P38398 1863 aaKnown RBP7.51□□□□□ -1.21
CHD4-205ENST00000536301 EDC4Q6P2E9 1401 aaKnown RBP7.51□□□□□ -1.21
CHD4-205ENST00000536301 ROCK2O75116 1388 aaKnown RBP7.5□□□□□ -1.21
CHD4-205ENST00000536301 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.5□□□□□ -1.21
CHD4-205ENST00000536301 JMYQ8N9B5 988 aa7.5□□□□□ -1.21
CHD4-205ENST00000536301 LINC00116Q8NCU8 138 aa7.5□□□□□ -1.21
CHD4-205ENST00000536301 KLRG1Q96E93 195 aa7.5□□□□□ -1.21
CHD4-205ENST00000536301 SIN3AQ96ST3 1273 aa7.5□□□□□ -1.21
CHD4-205ENST00000536301 A0A0G2JLW4 131 aa7.49□□□□□ -1.21
CHD4-205ENST00000536301 PRELPP51888 382 aa7.49□□□□□ -1.21
CHD4-205ENST00000536301 RRS1Q15050 365 aaKnown RBP7.49□□□□□ -1.21
CHD4-205ENST00000536301 MPRIPQ6WCQ1 1025 aa7.49□□□□□ -1.21
CHD4-205ENST00000536301 TNS4Q8IZW8 715 aa7.49□□□□□ -1.21
CHD4-205ENST00000536301 AK7Q96M32 723 aa7.49□□□□□ -1.21
CHD4-205ENST00000536301 PKD1L3Q7Z443 1732 aa7.49□□□□□ -1.21
CHD4-205ENST00000536301 KCPQ6ZWJ8 1503 aa7.48□□□□□ -1.21
CHD4-205ENST00000536301 CYP27B1O15528 508 aa7.48□□□□□ -1.21
CHD4-205ENST00000536301 ITPK1Q13572 414 aa7.48□□□□□ -1.21
CHD4-205ENST00000536301 HDGFL2Q7Z4V5 671 aaPredicted RBP7.48□□□□□ -1.21
CHD4-205ENST00000536301 FLAD1Q8NFF5 587 aa7.48□□□□□ -1.21
CHD4-205ENST00000536301 BCS1LQ9Y276 419 aa7.48□□□□□ -1.21
CHD4-205ENST00000536301 SBF1O95248 1867 aa7.47□□□□□ -1.21
CHD4-205ENST00000536301 MMP10P09238 476 aa7.47□□□□□ -1.21
CHD4-205ENST00000536301 DPEP1P16444 411 aa7.47□□□□□ -1.21
CHD4-205ENST00000536301 AMPHP49418 695 aa7.47□□□□□ -1.21
CHD4-205ENST00000536301 ARHGAP27Q6ZUM4 889 aa7.47□□□□□ -1.21
CHD4-205ENST00000536301 RBM46Q8TBY0 533 aaKnown RBP7.47□□□□□ -1.21
CHD4-205ENST00000536301 PIGBQ92521 554 aa7.47□□□□□ -1.21
CHD4-205ENST00000536301 ARFGEF1Q9Y6D6 1849 aa7.47□□□□□ -1.21
CHD4-205ENST00000536301 MYH14Q7Z406 1995 aaKnown RBP7.46□□□□□ -1.21
CHD4-205ENST00000536301 C10orf71Q711Q0 1435 aa7.46□□□□□ -1.21
CHD4-205ENST00000536301 GNPATO15228 680 aa7.46□□□□□ -1.22
CHD4-205ENST00000536301 C9orf131Q5VYM1 1079 aa7.46□□□□□ -1.22
CHD4-205ENST00000536301 C4AP0C0L4 1744 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 LOC102724428A0A0B4J2F2 783 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 FCHSD2O94868 740 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 HSPA1AP0DMV8 641 aaKnown RBP7.45□□□□□ -1.22
CHD4-205ENST00000536301 HSPA1BP0DMV9 641 aaKnown RBP7.45□□□□□ -1.22
CHD4-205ENST00000536301 TATP17735 454 aaPredicted RBP7.45□□□□□ -1.22
CHD4-205ENST00000536301 KCNA3P22001 575 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 SSFA2P28290 1259 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 SIK1P57059 783 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 HSP90AB2PQ58FF8 381 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 RAPGEF4Q8WZA2 1011 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 COG3Q96JB2 828 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 RRAGCQ9HB90 399 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 ASAP1Q9ULH1 1129 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 PCDH11XQ9BZA7 1347 aa7.45□□□□□ -1.22
CHD4-205ENST00000536301 PCDH11YQ9BZA8 1340 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms