RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 RGPD1P0DJD0 1748 aa19.92■□□□□ 0.78
CHMP1A-202ENST00000535997 ARHGEF10O15013 1369 aa19.91■□□□□ 0.78
CHMP1A-202ENST00000535997 DDX11L8A8MPP1 907 aa19.91■□□□□ 0.78
CHMP1A-202ENST00000535997 TRAK2O60296 914 aa19.91■□□□□ 0.78
CHMP1A-202ENST00000535997 CRB1P82279 1406 aa19.91■□□□□ 0.78
CHMP1A-202ENST00000535997 GSPT1P15170 499 aaKnown RBP19.9■□□□□ 0.78
CHMP1A-202ENST00000535997 CEP85Q6P2H3 762 aa19.9■□□□□ 0.78
CHMP1A-202ENST00000535997 SLC26A8Q96RN1 970 aa19.9■□□□□ 0.78
CHMP1A-202ENST00000535997 PEAK1Q9H792 1746 aa19.9■□□□□ 0.78
CHMP1A-202ENST00000535997 ATP10DQ9P241 1426 aa19.9■□□□□ 0.78
CHMP1A-202ENST00000535997 SLC4A2P04920 1241 aa19.9■□□□□ 0.78
CHMP1A-202ENST00000535997 TTC22Q5TAA0 569 aa19.9■□□□□ 0.78
CHMP1A-202ENST00000535997 RTF1Q92541 710 aaKnown RBP19.89■□□□□ 0.77
CHMP1A-202ENST00000535997 AMOTL2Q9Y2J4 779 aa19.89■□□□□ 0.77
CHMP1A-202ENST00000535997 TBX22Q9Y458 520 aa19.89■□□□□ 0.77
CHMP1A-202ENST00000535997 MAP3K19Q56UN5 1328 aa19.89■□□□□ 0.77
CHMP1A-202ENST00000535997 PTPRUQ92729 1446 aa19.89■□□□□ 0.77
CHMP1A-202ENST00000535997 RTL1A6NKG5 1358 aa19.88■□□□□ 0.77
CHMP1A-202ENST00000535997 K7ELQ4 463 aaPredicted RBP19.88■□□□□ 0.77
CHMP1A-202ENST00000535997 FSD2A1L4K1 749 aa19.87■□□□□ 0.77
CHMP1A-202ENST00000535997 MTHFSDQ2M296 383 aaKnown RBP19.87■□□□□ 0.77
CHMP1A-202ENST00000535997 SBNO1A3KN83 1393 aa19.87■□□□□ 0.77
CHMP1A-202ENST00000535997 FLT4P35916 1363 aa19.87■□□□□ 0.77
CHMP1A-202ENST00000535997 KDRP35968 1356 aa19.87■□□□□ 0.77
CHMP1A-202ENST00000535997 GOLGA6L3A6NEY3 463 aa19.87■□□□□ 0.77
CHMP1A-202ENST00000535997 HSP90AA1P07900 732 aaKnown RBP19.86■□□□□ 0.77
CHMP1A-202ENST00000535997 RAB3GAP1Q15042 981 aa19.86■□□□□ 0.77
CHMP1A-202ENST00000535997 C16orf71Q8IYS4 520 aaPredicted RBP19.86■□□□□ 0.77
CHMP1A-202ENST00000535997 SOX12O15370 315 aa19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 GAS2L2Q8NHY3 880 aa19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 TNPO1Q92973 898 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 GBP4Q96PP9 640 aa19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 MEIS3Q99687 375 aa19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 TSPYL4Q9UJ04 414 aa19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 MSH6P52701 1360 aa19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 HTATSF1O43719 755 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 CD2BP2O95400 341 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 FAM43AQ8N2R8 423 aa19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 NGDNQ8NEJ9 315 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-202ENST00000535997 FOXO3O43524 673 aa19.84■□□□□ 0.77
CHMP1A-202ENST00000535997 HMMRO75330 724 aa19.84■□□□□ 0.77
CHMP1A-202ENST00000535997 CCT4P50991 539 aaKnown RBP19.84■□□□□ 0.77
CHMP1A-202ENST00000535997 MIS18AQ9NYP9 233 aa19.84■□□□□ 0.77
CHMP1A-202ENST00000535997 IGSF1Q8N6C5 1336 aa19.83■□□□□ 0.76
CHMP1A-202ENST00000535997 PTMSP20962 102 aa19.83■□□□□ 0.76
CHMP1A-202ENST00000535997 AMPHP49418 695 aa19.83■□□□□ 0.76
CHMP1A-202ENST00000535997 CEBPAP49715 358 aaPredicted RBP19.83■□□□□ 0.76
CHMP1A-202ENST00000535997 RABEP1Q15276 862 aa19.83■□□□□ 0.76
CHMP1A-202ENST00000535997 EYA1Q99502 592 aa19.83■□□□□ 0.76
CHMP1A-202ENST00000535997 RBM42Q9BTD8 480 aaKnown RBP19.83■□□□□ 0.76
CHMP1A-202ENST00000535997 USP26Q9BXU7 913 aa19.83■□□□□ 0.76
CHMP1A-202ENST00000535997 GZF1Q9H116 711 aaPredicted RBP19.83■□□□□ 0.76
CHMP1A-202ENST00000535997 XRCC6P12956 609 aaKnown RBP eCLIP19.82■□□□□ 0.76
CHMP1A-202ENST00000535997 SLIT1O75093 1534 aa19.82■□□□□ 0.76
CHMP1A-202ENST00000535997 CASC1Q6TDU7 716 aa19.82■□□□□ 0.76
CHMP1A-202ENST00000535997 ISY1Q9ULR0 285 aaKnown RBP19.82■□□□□ 0.76
CHMP1A-202ENST00000535997 ARHGAP23Q9P227 1491 aa19.81■□□□□ 0.76
CHMP1A-202ENST00000535997 SDSP20132 328 aa19.81■□□□□ 0.76
CHMP1A-202ENST00000535997 SKOR2Q2VWA4 1001 aaPredicted RBP19.81■□□□□ 0.76
CHMP1A-202ENST00000535997 FMN2Q9NZ56 1722 aa19.8■□□□□ 0.76
CHMP1A-202ENST00000535997 OTUD7AQ8TE49 926 aaPredicted RBP19.8■□□□□ 0.76
CHMP1A-202ENST00000535997 G2E3Q7L622 706 aa19.79■□□□□ 0.76
CHMP1A-202ENST00000535997 THEMISQ8N1K5 641 aaPredicted RBP19.79■□□□□ 0.76
CHMP1A-202ENST00000535997 STK31Q9BXU1 1019 aa19.79■□□□□ 0.76
CHMP1A-202ENST00000535997 OSBPL3Q9H4L5 887 aa19.79■□□□□ 0.76
CHMP1A-202ENST00000535997 MRE11P49959 708 aa19.78■□□□□ 0.76
CHMP1A-202ENST00000535997 SLC4A10Q6U841 1118 aa19.78■□□□□ 0.76
CHMP1A-202ENST00000535997 SMARCA5O60264 1052 aaPredicted RBP19.78■□□□□ 0.76
CHMP1A-202ENST00000535997 CLEC17AQ6ZS10 378 aa19.78■□□□□ 0.76
CHMP1A-202ENST00000535997 NLRP6P59044 892 aa19.77■□□□□ 0.76
CHMP1A-202ENST00000535997 SOS1Q07889 1333 aaPredicted RBP19.77■□□□□ 0.76
CHMP1A-202ENST00000535997 GNAT3A8MTJ3 354 aa19.77■□□□□ 0.75
CHMP1A-202ENST00000535997 GNAI2P04899 355 aa19.77■□□□□ 0.75
CHMP1A-202ENST00000535997 DIP2AQ14689 1571 aa19.76■□□□□ 0.75
CHMP1A-202ENST00000535997 F6X3S4 739 aa19.76■□□□□ 0.75
CHMP1A-202ENST00000535997 REC8O95072 547 aa19.76■□□□□ 0.75
CHMP1A-202ENST00000535997 CCDC30Q5VVM6 783 aa19.76■□□□□ 0.75
CHMP1A-202ENST00000535997 BABAM1Q9NWV8 329 aa19.76■□□□□ 0.75
CHMP1A-202ENST00000535997 APBB1O00213 710 aa19.76■□□□□ 0.75
CHMP1A-202ENST00000535997 RGPD8O14715 1765 aaPredicted RBP19.75■□□□□ 0.75
CHMP1A-202ENST00000535997 CEP170BQ9Y4F5 1589 aaPredicted RBP19.74■□□□□ 0.75
CHMP1A-202ENST00000535997 FOXD4L1Q9NU39 408 aa19.74■□□□□ 0.75
CHMP1A-202ENST00000535997 ANKARQ7Z5J8 1434 aa19.74■□□□□ 0.75
CHMP1A-202ENST00000535997 GNAI3P08754 354 aa19.74■□□□□ 0.75
CHMP1A-202ENST00000535997 HOXC9P31274 260 aa19.73■□□□□ 0.75
CHMP1A-202ENST00000535997 PDE1AP54750 535 aa19.73■□□□□ 0.75
CHMP1A-202ENST00000535997 FLIIQ13045 1269 aa19.73■□□□□ 0.75
CHMP1A-202ENST00000535997 PIK3C2AO00443 1686 aa19.73■□□□□ 0.75
CHMP1A-202ENST00000535997 GOLGA6L22H0YM25 854 aa19.72■□□□□ 0.75
CHMP1A-202ENST00000535997 ERC2O15083 957 aa19.72■□□□□ 0.75
CHMP1A-202ENST00000535997 CACNA1FO60840 1977 aa19.72■□□□□ 0.75
CHMP1A-202ENST00000535997 RIMS1Q86UR5 1692 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-202ENST00000535997 ST18O60284 1047 aa19.71■□□□□ 0.75
CHMP1A-202ENST00000535997 NUCB2P80303 420 aa19.71■□□□□ 0.75
CHMP1A-202ENST00000535997 FKBP5Q13451 457 aaPredicted RBP19.71■□□□□ 0.75
CHMP1A-202ENST00000535997 TAF7Q15545 349 aaPredicted RBP19.71■□□□□ 0.75
CHMP1A-202ENST00000535997 GRPEL1Q9HAV7 217 aa19.71■□□□□ 0.75
CHMP1A-202ENST00000535997 IL17REQ8NFR9 667 aa19.71■□□□□ 0.75
CHMP1A-202ENST00000535997 ARXQ96QS3 562 aa19.71■□□□□ 0.75
CHMP1A-202ENST00000535997 CWC22Q9HCG8 908 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms