RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 ZCRB1Q8TBF4 217 aaKnown RBP27.76■■■□□ 2.03
LRP6-202ENST00000535731 GOLGB1Q14789 3259 aaKnown RBP27.76■■■□□ 2.03
LRP6-202ENST00000535731 TERF2IPQ9NYB0 399 aa27.75■■■□□ 2.03
LRP6-202ENST00000535731 EDC4Q6P2E9 1401 aaKnown RBP27.75■■■□□ 2.03
LRP6-202ENST00000535731 SIN3AQ96ST3 1273 aa27.74■■■□□ 2.03
LRP6-202ENST00000535731 CEP350Q5VT06 3117 aa27.74■■■□□ 2.03
LRP6-202ENST00000535731 NSD2O96028 1365 aa27.73■■■□□ 2.03
LRP6-202ENST00000535731 GPBP1L1Q9HC44 474 aaPredicted RBP27.73■■■□□ 2.03
LRP6-202ENST00000535731 ATP10DQ9P241 1426 aa27.73■■■□□ 2.03
LRP6-202ENST00000535731 CD2APQ9Y5K6 639 aa27.72■■■□□ 2.03
LRP6-202ENST00000535731 HMGB2P26583 209 aaKnown RBP27.71■■■□□ 2.03
LRP6-202ENST00000535731 MSL1Q68DK7 614 aa27.7■■■□□ 2.02
LRP6-202ENST00000535731 USP47Q96K76 1375 aa27.69■■■□□ 2.02
LRP6-202ENST00000535731 TUBGCP6Q96RT7 1819 aa27.69■■■□□ 2.02
LRP6-202ENST00000535731 HSPA6P17066 643 aa27.68■■■□□ 2.02
LRP6-202ENST00000535731 NEUROD1Q13562 356 aa27.68■■■□□ 2.02
LRP6-202ENST00000535731 FLAD1Q8NFF5 587 aa27.68■■■□□ 2.02
LRP6-202ENST00000535731 LY75O60449 1722 aa27.67■■■□□ 2.02
LRP6-202ENST00000535731 HOXC9P31274 260 aa27.67■■■□□ 2.02
LRP6-202ENST00000535731 AMPHP49418 695 aa27.67■■■□□ 2.02
LRP6-202ENST00000535731 PUS7Q96PZ0 661 aaKnown RBP27.67■■■□□ 2.02
LRP6-202ENST00000535731 A0A1W2PP64 1363 aa27.65■■■□□ 2.02
LRP6-202ENST00000535731 CARD11Q9BXL7 1154 aa27.65■■■□□ 2.02
LRP6-202ENST00000535731 MAP3K19Q56UN5 1328 aa27.65■■■□□ 2.02
LRP6-202ENST00000535731 COG3Q96JB2 828 aa27.64■■■□□ 2.02
LRP6-202ENST00000535731 FAM208AQ9UK61 1670 aaKnown RBP27.63■■■□□ 2.01
LRP6-202ENST00000535731 CGNL1Q0VF96 1302 aa27.62■■■□□ 2.01
LRP6-202ENST00000535731 DOT1LQ8TEK3 1739 aa27.61■■■□□ 2.01
LRP6-202ENST00000535731 FBLN1P23142 703 aa27.6■■■□□ 2.01
LRP6-202ENST00000535731 ZNF526Q8TF50 670 aaPredicted RBP27.6■■■□□ 2.01
LRP6-202ENST00000535731 ADCY9O60503 1353 aa27.6■■■□□ 2.01
LRP6-202ENST00000535731 MEGF6O75095 1541 aa27.59■■■□□ 2.01
LRP6-202ENST00000535731 NBPF6Q5VWK0 638 aa27.59■■■□□ 2.01
LRP6-202ENST00000535731 NBPF4Q96M43 638 aa27.59■■■□□ 2.01
LRP6-202ENST00000535731 RAPGEF4Q8WZA2 1011 aa27.57■■■□□ 2
LRP6-202ENST00000535731 TATP17735 454 aaPredicted RBP27.54■■■□□ 2
LRP6-202ENST00000535731 PALLDQ8WX93 1383 aa27.52■■■□□ 2
LRP6-202ENST00000535731 IGSF1Q8N6C5 1336 aa27.52■■■□□ 2
LRP6-202ENST00000535731 MPRIPQ6WCQ1 1025 aa27.52■■■□□ 2
LRP6-202ENST00000535731 USHBP1Q8N6Y0 703 aa27.52■■■□□ 2
LRP6-202ENST00000535731 SMARCC1Q92922 1105 aaPredicted RBP27.51■■□□□ 1.99
LRP6-202ENST00000535731 AK7Q96M32 723 aa27.51■■□□□ 1.99
LRP6-202ENST00000535731 RTL1A6NKG5 1358 aa27.5■■□□□ 1.99
LRP6-202ENST00000535731 RRS1Q15050 365 aaKnown RBP27.5■■□□□ 1.99
LRP6-202ENST00000535731 PCDH11XQ9BZA7 1347 aa27.49■■□□□ 1.99
LRP6-202ENST00000535731 PCDH11YQ9BZA8 1340 aa27.49■■□□□ 1.99
LRP6-202ENST00000535731 KIF3CO14782 793 aa27.49■■□□□ 1.99
LRP6-202ENST00000535731 RGPD2P0DJD1 1756 aa27.48■■□□□ 1.99
LRP6-202ENST00000535731 C5P01031 1676 aa27.47■■□□□ 1.99
LRP6-202ENST00000535731 WWC3Q9ULE0 1092 aa27.47■■□□□ 1.99
LRP6-202ENST00000535731 SLC24A1O60721 1099 aa27.46■■□□□ 1.99
LRP6-202ENST00000535731 AMIGO3Q86WK7 504 aa27.46■■□□□ 1.99
LRP6-202ENST00000535731 SMG6Q86US8 1419 aaKnown RBP27.45■■□□□ 1.98
LRP6-202ENST00000535731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.45■■□□□ 1.98
LRP6-202ENST00000535731 PHF14O94880 888 aa27.45■■□□□ 1.98
LRP6-202ENST00000535731 APLP1P51693 650 aa27.44■■□□□ 1.98
LRP6-202ENST00000535731 NSD3Q9BZ95 1437 aa27.43■■□□□ 1.98
LRP6-202ENST00000535731 FYB1O15117 783 aa27.43■■□□□ 1.98
LRP6-202ENST00000535731 CYP27B1O15528 508 aa27.43■■□□□ 1.98
LRP6-202ENST00000535731 SSFA2P28290 1259 aa27.43■■□□□ 1.98
LRP6-202ENST00000535731 TESK2Q96S53 571 aa27.43■■□□□ 1.98
LRP6-202ENST00000535731 SMIM5Q71RC9 77 aa27.42■■□□□ 1.98
LRP6-202ENST00000535731 HSP90AB2PQ58FF8 381 aa27.41■■□□□ 1.98
LRP6-202ENST00000535731 PIGBQ92521 554 aa27.41■■□□□ 1.98
LRP6-202ENST00000535731 TAF1LQ8IZX4 1826 aa27.4■■□□□ 1.98
LRP6-202ENST00000535731 GGNBP2Q9H3C7 697 aa27.4■■□□□ 1.98
LRP6-202ENST00000535731 C4BP0C0L5 1744 aa27.39■■□□□ 1.98
LRP6-202ENST00000535731 INSRP06213 1382 aa27.39■■□□□ 1.98
LRP6-202ENST00000535731 ST20-MTHFSA0A0A6YYL1 179 aa27.38■■□□□ 1.97
LRP6-202ENST00000535731 TOMM70O94826 608 aa27.38■■□□□ 1.97
LRP6-202ENST00000535731 DNAJC5GQ8N7S2 189 aa27.38■■□□□ 1.97
LRP6-202ENST00000535731 NKX1-1Q15270 411 aaPredicted RBP27.37■■□□□ 1.97
LRP6-202ENST00000535731 LOC102724428A0A0B4J2F2 783 aa27.36■■□□□ 1.97
LRP6-202ENST00000535731 SIK1P57059 783 aa27.36■■□□□ 1.97
LRP6-202ENST00000535731 LINC00116Q8NCU8 138 aa27.35■■□□□ 1.97
LRP6-202ENST00000535731 KIF24Q5T7B8 1368 aa27.34■■□□□ 1.97
LRP6-202ENST00000535731 TGFB2P61812 414 aa27.33■■□□□ 1.97
LRP6-202ENST00000535731 FLT4P35916 1363 aa27.33■■□□□ 1.97
LRP6-202ENST00000535731 UBR3Q6ZT12 1888 aa27.32■■□□□ 1.96
LRP6-202ENST00000535731 GNPATO15228 680 aa27.31■■□□□ 1.96
LRP6-202ENST00000535731 MMP10P09238 476 aa27.31■■□□□ 1.96
LRP6-202ENST00000535731 SPG7Q9UQ90 795 aa27.31■■□□□ 1.96
LRP6-202ENST00000535731 TOGARAM1Q9Y4F4 1720 aa27.3■■□□□ 1.96
LRP6-202ENST00000535731 ATP6V1AP38606 617 aa27.29■■□□□ 1.96
LRP6-202ENST00000535731 TMOD3Q9NYL9 352 aa27.29■■□□□ 1.96
LRP6-202ENST00000535731 BCS1LQ9Y276 419 aa27.29■■□□□ 1.96
LRP6-202ENST00000535731 ITPK1Q13572 414 aa27.28■■□□□ 1.96
LRP6-202ENST00000535731 ASAP1Q9ULH1 1129 aa27.28■■□□□ 1.96
LRP6-202ENST00000535731 CICQ96RK0 1608 aaPredicted RBP27.27■■□□□ 1.96
LRP6-202ENST00000535731 TONSLQ96HA7 1378 aa27.27■■□□□ 1.96
LRP6-202ENST00000535731 ARHGAP27Q6ZUM4 889 aa27.27■■□□□ 1.96
LRP6-202ENST00000535731 ITGB4P16144 1822 aa27.27■■□□□ 1.96
LRP6-202ENST00000535731 A0A0G2JLW4 131 aa27.26■■□□□ 1.95
LRP6-202ENST00000535731 NLGN1Q8N2Q7 840 aa27.26■■□□□ 1.95
LRP6-202ENST00000535731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.26■■□□□ 1.955e-7■■□□□ 13.1
LRP6-202ENST00000535731 PXDNLA1KZ92 1463 aa27.25■■□□□ 1.95
LRP6-202ENST00000535731 TRAPPC3LQ5T215 181 aa27.25■■□□□ 1.95
LRP6-202ENST00000535731 TMF1P82094 1093 aa27.24■■□□□ 1.95
LRP6-202ENST00000535731 NMRK2Q9NPI5 230 aa27.24■■□□□ 1.95
LRP6-202ENST00000535731 MAP2P11137 1827 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms