RNA–Protein interactions for RNA: ENST00000535174.5

DDB1-205, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-205ENST00000535174 DOT1LQ8TEK3 1739 aa23.18■■□□□ 1.3
DDB1-205ENST00000535174 SMG6Q86US8 1419 aaKnown RBP23.16■■□□□ 1.3
DDB1-205ENST00000535174 FBLN1P23142 703 aa23.16■■□□□ 1.3
DDB1-205ENST00000535174 GGNBP2Q9H3C7 697 aa23.15■■□□□ 1.3
DDB1-205ENST00000535174 ATF5Q9Y2D1 282 aaPredicted RBP23.15■■□□□ 1.3
DDB1-205ENST00000535174 SHANK3Q9BYB0 1731 aa23.14■■□□□ 1.3
DDB1-205ENST00000535174 RRS1Q15050 365 aaKnown RBP23.14■■□□□ 1.29
DDB1-205ENST00000535174 MEGF6O75095 1541 aa23.13■■□□□ 1.29
DDB1-205ENST00000535174 SYTL4Q96C24 671 aaPredicted RBP23.13■■□□□ 1.29
DDB1-205ENST00000535174 FYB1O15117 783 aa23.11■■□□□ 1.29
DDB1-205ENST00000535174 YY1P25490 414 aa23.11■■□□□ 1.29
DDB1-205ENST00000535174 MTFR1LQ9H019 292 aa23.11■■□□□ 1.29
DDB1-205ENST00000535174 PRKRIP1Q9H875 184 aaPredicted RBP23.11■■□□□ 1.29
DDB1-205ENST00000535174 PTGER2P43116 358 aa23.1■■□□□ 1.29
DDB1-205ENST00000535174 ZCRB1Q8TBF4 217 aaKnown RBP23.09■■□□□ 1.29
DDB1-205ENST00000535174 ZNF827Q17R98 1081 aa23.08■■□□□ 1.29
DDB1-205ENST00000535174 USHBP1Q8N6Y0 703 aa23.07■■□□□ 1.28
DDB1-205ENST00000535174 NSD3Q9BZ95 1437 aa23.07■■□□□ 1.28
DDB1-205ENST00000535174 FLT4P35916 1363 aa23.06■■□□□ 1.28
DDB1-205ENST00000535174 QSER1Q2KHR3 1735 aa23.06■■□□□ 1.28
DDB1-205ENST00000535174 PER1O15534 1290 aaPredicted RBP23.06■■□□□ 1.28
DDB1-205ENST00000535174 SLC27A3Q5K4L6 730 aa23.06■■□□□ 1.28
DDB1-205ENST00000535174 RAPGEF4Q8WZA2 1011 aa23.06■■□□□ 1.28
DDB1-205ENST00000535174 LRRC4BQ9NT99 713 aa23.06■■□□□ 1.28
DDB1-205ENST00000535174 LY75O60449 1722 aa23.05■■□□□ 1.28
DDB1-205ENST00000535174 PRIM1P49642 420 aaKnown RBP23.05■■□□□ 1.28
DDB1-205ENST00000535174 NBPF6Q5VWK0 638 aa23.05■■□□□ 1.28
DDB1-205ENST00000535174 NBPF4Q96M43 638 aa23.05■■□□□ 1.28
DDB1-205ENST00000535174 PANK3Q9H999 370 aa23.05■■□□□ 1.28
DDB1-205ENST00000535174 FHDC1Q9C0D6 1143 aaPredicted RBP23.04■■□□□ 1.28
DDB1-205ENST00000535174 CGNL1Q0VF96 1302 aa23.04■■□□□ 1.28
DDB1-205ENST00000535174 INSRP06213 1382 aa23.03■■□□□ 1.28
DDB1-205ENST00000535174 TATP17735 454 aaPredicted RBP23.03■■□□□ 1.28
DDB1-205ENST00000535174 TUBGCP6Q96RT7 1819 aa23.03■■□□□ 1.28
DDB1-205ENST00000535174 NSD2O96028 1365 aa23.02■■□□□ 1.28
DDB1-205ENST00000535174 KIF24Q5T7B8 1368 aa23.02■■□□□ 1.28
DDB1-205ENST00000535174 RALBP1Q15311 655 aa23.02■■□□□ 1.28
DDB1-205ENST00000535174 HSP90AB2PQ58FF8 381 aa23.02■■□□□ 1.28
DDB1-205ENST00000535174 AKT1S1Q96B36 256 aa23■■□□□ 1.27
DDB1-205ENST00000535174 ARXQ96QS3 562 aa23■■□□□ 1.27
DDB1-205ENST00000535174 SGIP1Q9BQI5 828 aa23■■□□□ 1.27
DDB1-205ENST00000535174 PCDH11XQ9BZA7 1347 aa23■■□□□ 1.27
DDB1-205ENST00000535174 PCDH11YQ9BZA8 1340 aa23■■□□□ 1.27
DDB1-205ENST00000535174 NPC1L1Q9UHC9 1359 aa23■■□□□ 1.27
DDB1-205ENST00000535174 KCNQ4P56696 695 aa22.99■■□□□ 1.27
DDB1-205ENST00000535174 SYT17Q9BSW7 474 aa22.99■■□□□ 1.27
DDB1-205ENST00000535174 TFCP2L1Q9NZI6 479 aa22.99■■□□□ 1.27
DDB1-205ENST00000535174 ANKRD26Q9UPS8 1709 aa22.99■■□□□ 1.27
DDB1-205ENST00000535174 CARD14Q9BXL6 1004 aa22.98■■□□□ 1.27
DDB1-205ENST00000535174 CCNL1Q9UK58 526 aaPredicted RBP22.98■■□□□ 1.27
DDB1-205ENST00000535174 EMILIN1Q9Y6C2 1016 aa22.98■■□□□ 1.27
DDB1-205ENST00000535174 PPM1GO15355 546 aaPredicted RBP22.97■■□□□ 1.27
DDB1-205ENST00000535174 KNSTRNQ9Y448 316 aa22.97■■□□□ 1.27
DDB1-205ENST00000535174 PNPLA7Q6ZV29 1317 aa22.97■■□□□ 1.27
DDB1-205ENST00000535174 KLHL34Q8N239 644 aa22.96■■□□□ 1.27
DDB1-205ENST00000535174 PKD1L3Q7Z443 1732 aa22.96■■□□□ 1.27
DDB1-205ENST00000535174 C5P01031 1676 aa22.95■■□□□ 1.26
DDB1-205ENST00000535174 POLD1P28340 1107 aa22.95■■□□□ 1.26
DDB1-205ENST00000535174 SLC16A10Q8TF71 515 aa22.95■■□□□ 1.26
DDB1-205ENST00000535174 TOGARAM1Q9Y4F4 1720 aa22.94■■□□□ 1.26
DDB1-205ENST00000535174 MAP3K5Q99683 1374 aa22.93■■□□□ 1.26
DDB1-205ENST00000535174 MAP2P11137 1827 aaKnown RBP22.92■■□□□ 1.26
DDB1-205ENST00000535174 MYBBP1AQ9BQG0 1328 aaKnown RBP22.92■■□□□ 1.26
DDB1-205ENST00000535174 MSH5O43196 834 aa22.92■■□□□ 1.26
DDB1-205ENST00000535174 COL24A1Q17RW2 1714 aa22.91■■□□□ 1.26
DDB1-205ENST00000535174 CENPBP07199 599 aaPredicted RBP22.91■■□□□ 1.26
DDB1-205ENST00000535174 ITGB4P16144 1822 aa22.9■■□□□ 1.26
DDB1-205ENST00000535174 AMER1Q5JTC6 1135 aaPredicted RBP22.9■■□□□ 1.26
DDB1-205ENST00000535174 PALLDQ8WX93 1383 aa22.89■■□□□ 1.26
DDB1-205ENST00000535174 MPRIPQ6WCQ1 1025 aa22.89■■□□□ 1.25
DDB1-205ENST00000535174 YTHDC1Q96MU7 727 aaKnown RBP22.88■■□□□ 1.25
DDB1-205ENST00000535174 NCAPD2Q15021 1401 aa22.88■■□□□ 1.25
DDB1-205ENST00000535174 TAF1LQ8IZX4 1826 aa22.87■■□□□ 1.25
DDB1-205ENST00000535174 CHD4Q14839 1912 aa22.87■■□□□ 1.25
DDB1-205ENST00000535174 CYP27B1O15528 508 aa22.87■■□□□ 1.25
DDB1-205ENST00000535174 MRS2Q9HD23 443 aa22.87■■□□□ 1.25
DDB1-205ENST00000535174 SPG7Q9UQ90 795 aa22.86■■□□□ 1.25
DDB1-205ENST00000535174 TNNT2P45379 298 aaPredicted RBP22.85■■□□□ 1.25
DDB1-205ENST00000535174 HMGB2P26583 209 aaKnown RBP22.84■■□□□ 1.25
DDB1-205ENST00000535174 GPR162Q16538 588 aa22.84■■□□□ 1.25
DDB1-205ENST00000535174 CC2D1BQ5T0F9 858 aaKnown RBP22.84■■□□□ 1.25
DDB1-205ENST00000535174 PELP1Q8IZL8 1130 aaKnown RBP22.84■■□□□ 1.25
DDB1-205ENST00000535174 C4BP0C0L5 1744 aa22.83■■□□□ 1.25
DDB1-205ENST00000535174 SMARCC1Q92922 1105 aaPredicted RBP22.83■■□□□ 1.25
DDB1-205ENST00000535174 COL23A1Q86Y22 540 aaPredicted RBP22.82■■□□□ 1.24
DDB1-205ENST00000535174 EYA1Q99502 592 aa22.82■■□□□ 1.24
DDB1-205ENST00000535174 POLKQ9UBT6 870 aa22.82■■□□□ 1.24
DDB1-205ENST00000535174 MSL1Q68DK7 614 aa22.81■■□□□ 1.24
DDB1-205ENST00000535174 UTRNP46939 3433 aa22.8■■□□□ 1.24
DDB1-205ENST00000535174 CCDC184Q52MB2 194 aa22.8■■□□□ 1.24
DDB1-205ENST00000535174 AK7Q96M32 723 aa22.8■■□□□ 1.24
DDB1-205ENST00000535174 CNGB1Q14028 1251 aaPredicted RBP22.79■■□□□ 1.24
DDB1-205ENST00000535174 EIF4A2Q14240 407 aaKnown RBP22.78■■□□□ 1.24
DDB1-205ENST00000535174 ZNF784Q8NCA9 323 aaPredicted RBP22.78■■□□□ 1.24
DDB1-205ENST00000535174 FLAD1Q8NFF5 587 aa22.78■■□□□ 1.24
DDB1-205ENST00000535174 NLGN2Q8NFZ4 835 aa22.78■■□□□ 1.24
DDB1-205ENST00000535174 TMOD3Q9NYL9 352 aa22.78■■□□□ 1.24
DDB1-205ENST00000535174 NKX1-1Q15270 411 aaPredicted RBP22.77■■□□□ 1.24
DDB1-205ENST00000535174 PIGBQ92521 554 aa22.77■■□□□ 1.24
DDB1-205ENST00000535174 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms