RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PRICKLE2Q7Z3G6 844 aa3.05□□□□□ -1.92
COPB1-212ENST00000534771 CFAP44Q96MT7 982 aa3.05□□□□□ -1.92
COPB1-212ENST00000534771 AVENQ9NQS1 362 aaPredicted RBP3.05□□□□□ -1.92
COPB1-212ENST00000534771 FAM229AH3BQW9 127 aa3.04□□□□□ -1.92
COPB1-212ENST00000534771 SLCO4C1Q6ZQN7 724 aa3.04□□□□□ -1.92
COPB1-212ENST00000534771 PAXIP1Q6ZW49 1069 aaPredicted RBP3.04□□□□□ -1.92
COPB1-212ENST00000534771 CHSY3Q70JA7 882 aa3.04□□□□□ -1.92
COPB1-212ENST00000534771 LSRQ86X29 649 aaPredicted RBP3.04□□□□□ -1.92
COPB1-212ENST00000534771 CCDC116Q8IYX3 515 aa3.04□□□□□ -1.92
COPB1-212ENST00000534771 MICALL1Q8N3F8 863 aa3.04□□□□□ -1.92
COPB1-212ENST00000534771 MED26O95402 600 aa3.03□□□□□ -1.92
COPB1-212ENST00000534771 CD97P48960 835 aa3.03□□□□□ -1.92
COPB1-212ENST00000534771 KCNH2Q12809 1159 aa3.03□□□□□ -1.92
COPB1-212ENST00000534771 GRIK4Q16099 956 aa3.03□□□□□ -1.92
COPB1-212ENST00000534771 HLA-CQ95604 372 aa3.03□□□□□ -1.92
COPB1-212ENST00000534771 MS4A1P11836 297 aa3.02□□□□□ -1.93
COPB1-212ENST00000534771 MLLT3P42568 568 aaPredicted RBP3.02□□□□□ -1.93
COPB1-212ENST00000534771 AGERQ15109 404 aa3.02□□□□□ -1.93
COPB1-212ENST00000534771 FOXD4L5Q5VV16 416 aaPredicted RBP3.02□□□□□ -1.93
COPB1-212ENST00000534771 ARHGEF1Q92888 912 aaKnown RBP3.02□□□□□ -1.93
COPB1-212ENST00000534771 NACC1Q96RE7 527 aa3.02□□□□□ -1.93
COPB1-212ENST00000534771 CFHR5Q9BXR6 569 aa3.02□□□□□ -1.93
COPB1-212ENST00000534771 WDR26Q9H7D7 661 aa3.02□□□□□ -1.93
COPB1-212ENST00000534771 PGPEP1Q9NXJ5 209 aa3.02□□□□□ -1.93
COPB1-212ENST00000534771 NUTM2FA1L443 756 aa3.01□□□□□ -1.93
COPB1-212ENST00000534771 SPDYE3A6NKU9 549 aa3.01□□□□□ -1.93
COPB1-212ENST00000534771 C2CD2LO14523 706 aa3.01□□□□□ -1.93
COPB1-212ENST00000534771 ADAMTS4O75173 837 aa3.01□□□□□ -1.93
COPB1-212ENST00000534771 BMP4P12644 408 aa3.01□□□□□ -1.93
COPB1-212ENST00000534771 ZNF648Q5T619 568 aaPredicted RBP3.01□□□□□ -1.93
COPB1-212ENST00000534771 PPP1R26Q5T8A7 1209 aaPredicted RBP3.01□□□□□ -1.93
COPB1-212ENST00000534771 VASH1Q7L8A9 365 aaPredicted RBP3.01□□□□□ -1.93
COPB1-212ENST00000534771 METTL3Q86U44 580 aaKnown RBP3.01□□□□□ -1.93
COPB1-212ENST00000534771 RNF135Q8IUD6 432 aa3.01□□□□□ -1.93
COPB1-212ENST00000534771 SULF1Q8IWU6 871 aa3.01□□□□□ -1.93
COPB1-212ENST00000534771 NLRP7Q8WX94 980 aa3.01□□□□□ -1.93
COPB1-212ENST00000534771 NEURL1BA8MQ27 555 aa3□□□□□ -1.93
COPB1-212ENST00000534771 NUCKS1Q9H1E3 243 aaKnown RBP3□□□□□ -1.93
COPB1-212ENST00000534771 ADGRE2Q9UHX3 823 aa3□□□□□ -1.93
COPB1-212ENST00000534771 TRIM28Q13263 835 aaKnown RBP2.99□□□□□ -1.93
COPB1-212ENST00000534771 C4orf48Q5BLP8 95 aa2.99□□□□□ -1.93
COPB1-212ENST00000534771 ADGRE1Q14246 886 aa2.98□□□□□ -1.93
COPB1-212ENST00000534771 MBTPS1Q14703 1052 aa2.98□□□□□ -1.93
COPB1-212ENST00000534771 TXNRD3Q86VQ6 643 aa2.98□□□□□ -1.93
COPB1-212ENST00000534771 ASIC4Q96FT7 647 aa2.98□□□□□ -1.93
COPB1-212ENST00000534771 DYRK1BQ9Y463 629 aa2.98□□□□□ -1.93
COPB1-212ENST00000534771 C9orf172C9J069 976 aa2.97□□□□□ -1.93
COPB1-212ENST00000534771 NRG1Q02297 640 aaPredicted RBP2.97□□□□□ -1.93
COPB1-212ENST00000534771 GUCA2AQ02747 115 aa2.97□□□□□ -1.93
COPB1-212ENST00000534771 PTPRNQ16849 979 aa2.97□□□□□ -1.93
COPB1-212ENST00000534771 PHF24Q9UPV7 400 aa2.97□□□□□ -1.93
COPB1-212ENST00000534771 KDM4AO75164 1064 aa2.96□□□□□ -1.94
COPB1-212ENST00000534771 CTBSQ01459 385 aa2.96□□□□□ -1.94
COPB1-212ENST00000534771 HIC1Q14526 733 aa2.96□□□□□ -1.94
COPB1-212ENST00000534771 RETREG3Q86VR2 466 aa2.96□□□□□ -1.94
COPB1-212ENST00000534771 KCNV2Q8TDN2 545 aa2.96□□□□□ -1.94
COPB1-212ENST00000534771 KIAA1324LA8MWY0 1029 aaPredicted RBP2.95□□□□□ -1.94
COPB1-212ENST00000534771 SEMA3EO15041 775 aa2.95□□□□□ -1.94
COPB1-212ENST00000534771 CTHP32929 405 aa2.95□□□□□ -1.94
COPB1-212ENST00000534771 GNPATO15228 680 aa2.94□□□□□ -1.94
COPB1-212ENST00000534771 KRTAP19-4Q3LI73 84 aa2.94□□□□□ -1.94
COPB1-212ENST00000534771 SMYD5Q6GMV2 418 aa2.94□□□□□ -1.94
COPB1-212ENST00000534771 BPHLQ86WA6 291 aaPredicted RBP2.94□□□□□ -1.94
COPB1-212ENST00000534771 TSHZ2Q9NRE2 1034 aa2.94□□□□□ -1.94
COPB1-212ENST00000534771 KDM2AQ9Y2K7 1162 aa2.94□□□□□ -1.94
COPB1-212ENST00000534771 SELPP16109 830 aa2.93□□□□□ -1.94
COPB1-212ENST00000534771 RGS19P49795 217 aa2.93□□□□□ -1.94
COPB1-212ENST00000534771 POU4F2Q12837 409 aa2.93□□□□□ -1.94
COPB1-212ENST00000534771 DBX2Q6ZNG2 339 aa2.93□□□□□ -1.94
COPB1-212ENST00000534771 P3H3Q8IVL6 736 aa2.93□□□□□ -1.94
COPB1-212ENST00000534771 SSBP4Q9BWG4 385 aaPredicted RBP2.93□□□□□ -1.94
COPB1-212ENST00000534771 MAP4K5Q9Y4K4 846 aa2.93□□□□□ -1.94
COPB1-212ENST00000534771 WNT11O96014 354 aa2.92□□□□□ -1.94
COPB1-212ENST00000534771 THBS1P07996 1170 aa2.92□□□□□ -1.94
COPB1-212ENST00000534771 ARAFP10398 606 aa2.92□□□□□ -1.94
COPB1-212ENST00000534771 FSTP19883 344 aa2.92□□□□□ -1.94
COPB1-212ENST00000534771 COL9A3Q14050 684 aaPredicted RBP2.92□□□□□ -1.94
COPB1-212ENST00000534771 AMER1Q5JTC6 1135 aaPredicted RBP2.92□□□□□ -1.94
COPB1-212ENST00000534771 RBM26Q5T8P6 1007 aaKnown RBP2.92□□□□□ -1.94
COPB1-212ENST00000534771 IGHA2P01877 340 aa2.91□□□□□ -1.94
COPB1-212ENST00000534771 F11P03951 625 aa2.91□□□□□ -1.94
COPB1-212ENST00000534771 PTGIRP43119 386 aa2.91□□□□□ -1.94
COPB1-212ENST00000534771 RNF144AP50876 292 aaPredicted RBP2.91□□□□□ -1.94
COPB1-212ENST00000534771 PKN1Q16512 942 aa2.91□□□□□ -1.94
COPB1-212ENST00000534771 SLC51AQ86UW1 340 aa2.91□□□□□ -1.94
COPB1-212ENST00000534771 TMPRSS5Q9H3S3 457 aa2.91□□□□□ -1.94
COPB1-212ENST00000534771 C6orf229H3BNL8 230 aa2.9□□□□□ -1.95
COPB1-212ENST00000534771 HOXA2O43364 376 aa2.9□□□□□ -1.95
COPB1-212ENST00000534771 FGFR3P22607 806 aa2.9□□□□□ -1.95
COPB1-212ENST00000534771 USP46P62068 366 aa2.9□□□□□ -1.95
COPB1-212ENST00000534771 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
COPB1-212ENST00000534771 PHOX2BQ99453 314 aa2.9□□□□□ -1.95
COPB1-212ENST00000534771 KLF15Q9UIH9 416 aa2.9□□□□□ -1.95
COPB1-212ENST00000534771 TESPA1A2RU30 521 aaPredicted RBP2.89□□□□□ -1.95
COPB1-212ENST00000534771 SUV39H1O43463 412 aa2.89□□□□□ -1.95
COPB1-212ENST00000534771 TGFB1P01137 390 aa2.89□□□□□ -1.95
COPB1-212ENST00000534771 SHISA2Q6UWI4 295 aa2.89□□□□□ -1.95
COPB1-212ENST00000534771 FCHSD1Q86WN1 690 aa2.89□□□□□ -1.95
COPB1-212ENST00000534771 LENG1Q96BZ8 264 aaPredicted RBP2.89□□□□□ -1.95
COPB1-212ENST00000534771 ABHD17AQ96GS6 310 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms