RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 PCDH11YQ9BZA8 1340 aa14.3□□□□□ -0.12
CSDE1-217ENST00000534699 TXNRD1Q16881 649 aa14.29□□□□□ -0.12
CSDE1-217ENST00000534699 SPON1Q9HCB6 807 aa14.28□□□□□ -0.12
CSDE1-217ENST00000534699 NPC1L1Q9UHC9 1359 aa14.28□□□□□ -0.12
CSDE1-217ENST00000534699 MEGF6O75095 1541 aa14.28□□□□□ -0.12
CSDE1-217ENST00000534699 ZNF831Q5JPB2 1677 aa14.28□□□□□ -0.12
CSDE1-217ENST00000534699 KCNQ2O43526 872 aa14.28□□□□□ -0.12
CSDE1-217ENST00000534699 SLC16A10Q8TF71 515 aa14.27□□□□□ -0.12
CSDE1-217ENST00000534699 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.13
CSDE1-217ENST00000534699 NBPF6Q5VWK0 638 aa14.27□□□□□ -0.13
CSDE1-217ENST00000534699 NBPF4Q96M43 638 aa14.27□□□□□ -0.13
CSDE1-217ENST00000534699 PSDA5PKW4 1024 aaPredicted RBP14.26□□□□□ -0.13
CSDE1-217ENST00000534699 SPG7Q9UQ90 795 aa14.26□□□□□ -0.13
CSDE1-217ENST00000534699 RRS1Q15050 365 aaKnown RBP14.26□□□□□ -0.13
CSDE1-217ENST00000534699 SLC15A2Q16348 729 aa14.26□□□□□ -0.13
CSDE1-217ENST00000534699 PROM2Q8N271 834 aa14.25□□□□□ -0.13
CSDE1-217ENST00000534699 SMARCC1Q92922 1105 aaPredicted RBP14.25□□□□□ -0.13
CSDE1-217ENST00000534699 LTV1Q96GA3 475 aaPredicted RBP14.25□□□□□ -0.13
CSDE1-217ENST00000534699 POLKQ9UBT6 870 aa14.24□□□□□ -0.13
CSDE1-217ENST00000534699 ITGB4P16144 1822 aa14.24□□□□□ -0.13
CSDE1-217ENST00000534699 PANK3Q9H999 370 aa14.24□□□□□ -0.13
CSDE1-217ENST00000534699 HSP90AB2PQ58FF8 381 aa14.23□□□□□ -0.13
CSDE1-217ENST00000534699 MAP3K5Q99683 1374 aa14.23□□□□□ -0.13
CSDE1-217ENST00000534699 KNSTRNQ9Y448 316 aa14.23□□□□□ -0.13
CSDE1-217ENST00000534699 HSP90AB1P08238 724 aaKnown RBP14.22□□□□□ -0.13
CSDE1-217ENST00000534699 IGSF1Q8N6C5 1336 aa14.21□□□□□ -0.13
CSDE1-217ENST00000534699 FLAD1Q8NFF5 587 aa14.21□□□□□ -0.13
CSDE1-217ENST00000534699 MTFR1LQ9H019 292 aa14.21□□□□□ -0.13
CSDE1-217ENST00000534699 TAF1LQ8IZX4 1826 aa14.21□□□□□ -0.13
CSDE1-217ENST00000534699 DDX54Q8TDD1 881 aaKnown RBP14.21□□□□□ -0.13
CSDE1-217ENST00000534699 C5P01031 1676 aa14.2□□□□□ -0.14
CSDE1-217ENST00000534699 EMILIN1Q9Y6C2 1016 aa14.2□□□□□ -0.14
CSDE1-217ENST00000534699 DCAF8L1A6NGE4 600 aa14.2□□□□□ -0.14
CSDE1-217ENST00000534699 AMOTQ4VCS5 1084 aa14.2□□□□□ -0.14
CSDE1-217ENST00000534699 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
CSDE1-217ENST00000534699 CICQ96RK0 1608 aaPredicted RBP14.2□□□□□ -0.14
CSDE1-217ENST00000534699 KAT6BQ8WYB5 2073 aa14.19□□□□□ -0.14
CSDE1-217ENST00000534699 TOGARAM1Q9Y4F4 1720 aa14.19□□□□□ -0.14
CSDE1-217ENST00000534699 MORC1Q86VD1 984 aa14.19□□□□□ -0.14
CSDE1-217ENST00000534699 IFNL2Q8IZJ0 200 aa14.18□□□□□ -0.14
CSDE1-217ENST00000534699 ACSBG1Q96GR2 724 aa14.18□□□□□ -0.14
CSDE1-217ENST00000534699 ANO8Q9HCE9 1232 aaPredicted RBP14.18□□□□□ -0.14
CSDE1-217ENST00000534699 PRIM1P49642 420 aaKnown RBP14.18□□□□□ -0.14
CSDE1-217ENST00000534699 EYA1Q99502 592 aa14.18□□□□□ -0.14
CSDE1-217ENST00000534699 KIF7Q2M1P5 1343 aa14.18□□□□□ -0.14
CSDE1-217ENST00000534699 TUBGCP6Q96RT7 1819 aa14.18□□□□□ -0.14
CSDE1-217ENST00000534699 PTF1AQ7RTS3 328 aa14.17□□□□□ -0.14
CSDE1-217ENST00000534699 EIF4A2Q14240 407 aaKnown RBP14.17□□□□□ -0.14
CSDE1-217ENST00000534699 PLEKHO1Q53GL0 409 aaPredicted RBP14.17□□□□□ -0.14
CSDE1-217ENST00000534699 KDRP35968 1356 aa14.17□□□□□ -0.14
CSDE1-217ENST00000534699 ERVV-2B6SEH9 535 aa14.16□□□□□ -0.14
CSDE1-217ENST00000534699 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
CSDE1-217ENST00000534699 FBLN1P23142 703 aa14.16□□□□□ -0.14
CSDE1-217ENST00000534699 PPP1R1BQ9UD71 204 aaPredicted RBP14.16□□□□□ -0.14
CSDE1-217ENST00000534699 CYP27B1O15528 508 aa14.15□□□□□ -0.14
CSDE1-217ENST00000534699 PER1O15534 1290 aaPredicted RBP14.14□□□□□ -0.15
CSDE1-217ENST00000534699 SGIP1Q9BQI5 828 aa14.14□□□□□ -0.15
CSDE1-217ENST00000534699 PHKG2P15735 406 aa14.13□□□□□ -0.15
CSDE1-217ENST00000534699 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
CSDE1-217ENST00000534699 CCNL1Q9UK58 526 aaPredicted RBP14.13□□□□□ -0.15
CSDE1-217ENST00000534699 EP400Q96L91 3159 aa14.13□□□□□ -0.15
CSDE1-217ENST00000534699 PTGER2P43116 358 aa14.13□□□□□ -0.15
CSDE1-217ENST00000534699 DCAF5Q96JK2 942 aa14.13□□□□□ -0.15
CSDE1-217ENST00000534699 LRRC4BQ9NT99 713 aa14.13□□□□□ -0.15
CSDE1-217ENST00000534699 C4BP0C0L5 1744 aa14.13□□□□□ -0.15
CSDE1-217ENST00000534699 SCN11AQ9UI33 1791 aa14.13□□□□□ -0.15
CSDE1-217ENST00000534699 PALLDQ8WX93 1383 aa14.13□□□□□ -0.15
CSDE1-217ENST00000534699 USHBP1Q8N6Y0 703 aa14.12□□□□□ -0.15
CSDE1-217ENST00000534699 ADAMTS7Q9UKP4 1686 aa14.12□□□□□ -0.15
CSDE1-217ENST00000534699 PPM1GO15355 546 aaPredicted RBP14.11□□□□□ -0.15
CSDE1-217ENST00000534699 UBR3Q6ZT12 1888 aa14.11□□□□□ -0.15
CSDE1-217ENST00000534699 POLD1P28340 1107 aa14.11□□□□□ -0.15
CSDE1-217ENST00000534699 IL13P35225 146 aa14.1□□□□□ -0.15
CSDE1-217ENST00000534699 SYTL4Q96C24 671 aaPredicted RBP14.1□□□□□ -0.15
CSDE1-217ENST00000534699 TMOD3Q9NYL9 352 aa14.1□□□□□ -0.15
CSDE1-217ENST00000534699 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
CSDE1-217ENST00000534699 ZNF827Q17R98 1081 aa14.09□□□□□ -0.15
CSDE1-217ENST00000534699 COL5A3P25940 1745 aaPredicted RBP14.08□□□□□ -0.15
CSDE1-217ENST00000534699 MRC1P22897 1456 aa14.08□□□□□ -0.16
CSDE1-217ENST00000534699 RC3H1Q5TC82 1133 aaKnown RBP14.08□□□□□ -0.16
CSDE1-217ENST00000534699 ARXQ96QS3 562 aa14.08□□□□□ -0.16
CSDE1-217ENST00000534699 TFCP2L1Q9NZI6 479 aa14.08□□□□□ -0.16
CSDE1-217ENST00000534699 SSFA2P28290 1259 aa14.08□□□□□ -0.16
CSDE1-217ENST00000534699 C1orf141Q5JVX7 400 aa14.07□□□□□ -0.16
CSDE1-217ENST00000534699 PIGBQ92521 554 aa14.07□□□□□ -0.16
CSDE1-217ENST00000534699 VIRMAQ69YN4 1812 aaKnown RBP14.07□□□□□ -0.16
CSDE1-217ENST00000534699 ADRA2BP18089 450 aa14.07□□□□□ -0.16
CSDE1-217ENST00000534699 AKAP4Q5JQC9 854 aa14.06□□□□□ -0.16
CSDE1-217ENST00000534699 COL3A1P02461 1466 aaPredicted RBP14.06□□□□□ -0.16
CSDE1-217ENST00000534699 CHD4Q14839 1912 aa14.05□□□□□ -0.16
CSDE1-217ENST00000534699 DIAPH1O60610 1272 aaKnown RBP14.05□□□□□ -0.16
CSDE1-217ENST00000534699 ZBTB7AO95365 584 aa14.05□□□□□ -0.16
CSDE1-217ENST00000534699 MPRIPQ6WCQ1 1025 aa14.05□□□□□ -0.16
CSDE1-217ENST00000534699 CNTNAP4Q9C0A0 1308 aa14.04□□□□□ -0.16
CSDE1-217ENST00000534699 LOC102724428A0A0B4J2F2 783 aa14.04□□□□□ -0.16
CSDE1-217ENST00000534699 SIK1P57059 783 aa14.04□□□□□ -0.16
CSDE1-217ENST00000534699 ZNF530Q6P9A1 599 aaPredicted RBP14.04□□□□□ -0.16
CSDE1-217ENST00000534699 CFAP53Q96M91 514 aa14.04□□□□□ -0.16
CSDE1-217ENST00000534699 MTHFSP49914 203 aa14.04□□□□□ -0.16
CSDE1-217ENST00000534699 AK7Q96M32 723 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms