RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 POLR3GO15318 223 aaPredicted RBP12.17□□□□□ -0.46
NCAPD3-214ENST00000534548 MYO5CQ9NQX4 1742 aa12.17□□□□□ -0.46
NCAPD3-214ENST00000534548 SNX21Q969T3 373 aa12.17□□□□□ -0.46
NCAPD3-214ENST00000534548 MAP3K11Q16584 847 aa12.16□□□□□ -0.46
NCAPD3-214ENST00000534548 KIF18AQ8NI77 898 aa12.16□□□□□ -0.46
NCAPD3-214ENST00000534548 CFAP65Q6ZU64 1925 aaKnown RBP12.16□□□□□ -0.46
NCAPD3-214ENST00000534548 MINK1Q8N4C8 1332 aaPredicted RBP12.16□□□□□ -0.46
NCAPD3-214ENST00000534548 IFIT2P09913 472 aaKnown RBP12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 SMC5Q8IY18 1101 aa12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 KIF2AO00139 706 aaPredicted RBP12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 CAMK4Q16566 473 aa12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 FAM177A1Q8N128 213 aaPredicted RBP12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 FANCAO15360 1455 aa12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 FAM177BA6PVY3 158 aa12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 EIF3JO75822 258 aaKnown RBP12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 HMOX1P09601 288 aa12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 IRX3P78415 501 aaPredicted RBP12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 TBC1D9Q6ZT07 1266 aa12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 TTC12Q9H892 705 aaPredicted RBP12.15□□□□□ -0.46
NCAPD3-214ENST00000534548 IPO7O95373 1038 aaKnown RBP12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 CEBPZQ03701 1054 aaKnown RBP12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 FKBP5Q13451 457 aaPredicted RBP12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 RBM25P49756 843 aaKnown RBP12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 DHX8Q14562 1220 aaKnown RBP12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 BMP2KLQ5H9B9 411 aa12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 PSMA5P28066 241 aa12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 USP8P40818 1118 aa12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 ADGRL1O94910 1474 aa12.14□□□□□ -0.47
NCAPD3-214ENST00000534548 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 OLFM4Q6UX06 510 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 CNTROBQ8N137 903 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 ERVK-7P63135 1459 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 ERLIN1O75477 346 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 BMS1Q14692 1282 aaKnown RBP12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 TWISTNBQ3B726 338 aaPredicted RBP12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 GPATCH11Q8N954 259 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 PAXBP1Q9Y5B6 917 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 HCLS1P14317 486 aaPredicted RBP12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 TTLL5Q6EMB2 1281 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 RASSF8Q8NHQ8 419 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 CLIP2Q9UDT6 1046 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 HOOK1Q9UJC3 728 aaKnown RBP12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 CHD1O14646 1710 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 PLXNC1O60486 1568 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 SPATA32Q96LK8 384 aa12.13□□□□□ -0.47
NCAPD3-214ENST00000534548 VGLL3A8MV65 326 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 HSP90AB3PQ58FF7 597 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 OGFRQ9NZT2 677 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 SYNE3Q6ZMZ3 975 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 FEZ1Q99689 392 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 RAPGEF3O95398 923 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 SSH1Q8WYL5 1049 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 RBSNQ9H1K0 784 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 MADDQ8WXG6 1647 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 NPC1L1Q9UHC9 1359 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 A0A0G2JS52 829 aa12.12□□□□□ -0.47
NCAPD3-214ENST00000534548 FBLN1P23142 703 aa12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 TRMT1Q9NXH9 659 aaKnown RBP12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 CLTCL1P53675 1640 aa12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 CPLX1O14810 134 aa12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 ABCC1P33527 1531 aa12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 CEP135Q66GS9 1140 aa12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 GAS2L2Q8NHY3 880 aa12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 UPF3BQ9BZI7 483 aaKnown RBP12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 CYP46A1Q9Y6A2 500 aa12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 ANKRD20A12PQ8NF67 263 aa12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 MYRIPQ8NFW9 859 aa12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 CCDC9Q9Y3X0 531 aaKnown RBP12.11□□□□□ -0.47
NCAPD3-214ENST00000534548 POLR3AO14802 1390 aaPredicted RBP12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 SERPINC1P01008 464 aa12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 C14orf93Q9H972 538 aaKnown RBP12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 SYNMO15061 1565 aa12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 KIAA0754O94854 1291 aa12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 TRPM2O94759 1503 aa12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 PTPRTO14522 1441 aa12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 TRIM27P14373 513 aa12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 CEP57L1Q8IYX8 460 aa12.1□□□□□ -0.47
NCAPD3-214ENST00000534548 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
NCAPD3-214ENST00000534548 CAGE1Q8TC20 777 aa12.09□□□□□ -0.47
NCAPD3-214ENST00000534548 USP19O94966 1318 aa12.09□□□□□ -0.47
NCAPD3-214ENST00000534548 FSD2A1L4K1 749 aa12.09□□□□□ -0.47
NCAPD3-214ENST00000534548 VGFO15240 615 aaPredicted RBP12.09□□□□□ -0.47
NCAPD3-214ENST00000534548 LAMC1P11047 1609 aa12.09□□□□□ -0.47
NCAPD3-214ENST00000534548 PRKAR2BP31323 418 aa12.09□□□□□ -0.47
NCAPD3-214ENST00000534548 PDIA4P13667 645 aaKnown RBP12.09□□□□□ -0.47
NCAPD3-214ENST00000534548 TRIM29Q14134 588 aa12.08□□□□□ -0.47
NCAPD3-214ENST00000534548 COG3Q96JB2 828 aa12.08□□□□□ -0.47
NCAPD3-214ENST00000534548 LRRCC1Q9C099 1032 aa12.08□□□□□ -0.47
NCAPD3-214ENST00000534548 URI1O94763 535 aaPredicted RBP12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 U2AF2P26368 475 aaKnown RBP eCLIP12.08□□□□□ -0.481e-6■□□□□ 8.4
NCAPD3-214ENST00000534548 TXLNBQ8N3L3 684 aa12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 TRIM34Q9BYJ4 488 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms