RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CC2D1BQ5T0F9 858 aaKnown RBP29.07■■■□□ 2.24
PKP3-211ENST00000534401 PTF1AQ7RTS3 328 aa29.07■■■□□ 2.24
PKP3-211ENST00000534401 RGPD4Q7Z3J3 1758 aa29.07■■■□□ 2.24
PKP3-211ENST00000534401 PLEKHG2Q9H7P9 1386 aa29.07■■■□□ 2.24
PKP3-211ENST00000534401 NHSQ6T4R5 1651 aa29.06■■■□□ 2.24
PKP3-211ENST00000534401 IGSF1Q8N6C5 1336 aa29.06■■■□□ 2.24
PKP3-211ENST00000534401 TATP17735 454 aaPredicted RBP29.06■■■□□ 2.24
PKP3-211ENST00000534401 PKD1L3Q7Z443 1732 aa29.06■■■□□ 2.24
PKP3-211ENST00000534401 PLSCR1O15162 318 aa29.05■■■□□ 2.24
PKP3-211ENST00000534401 RREB1Q92766 1687 aa29.04■■■□□ 2.24
PKP3-211ENST00000534401 MTHFSP49914 203 aa29.03■■■□□ 2.24
PKP3-211ENST00000534401 EZH2Q15910 746 aaKnown RBP29.03■■■□□ 2.24
PKP3-211ENST00000534401 DDX54Q8TDD1 881 aaKnown RBP29.02■■■□□ 2.24
PKP3-211ENST00000534401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.02■■■□□ 2.24
PKP3-211ENST00000534401 KCNQ2O43526 872 aa29.01■■■□□ 2.23
PKP3-211ENST00000534401 IL13P35225 146 aa29.01■■■□□ 2.23
PKP3-211ENST00000534401 KAT6BQ8WYB5 2073 aa29.01■■■□□ 2.23
PKP3-211ENST00000534401 PCDH11XQ9BZA7 1347 aa28.96■■■□□ 2.23
PKP3-211ENST00000534401 PCDH11YQ9BZA8 1340 aa28.96■■■□□ 2.23
PKP3-211ENST00000534401 SRCAPQ6ZRS2 3230 aa28.96■■■□□ 2.23
PKP3-211ENST00000534401 CYP27B1O15528 508 aa28.96■■■□□ 2.23
PKP3-211ENST00000534401 NUP188Q5SRE5 1749 aa28.96■■■□□ 2.23
PKP3-211ENST00000534401 KDRP35968 1356 aa28.96■■■□□ 2.23
PKP3-211ENST00000534401 BTAF1O14981 1849 aa28.95■■■□□ 2.23
PKP3-211ENST00000534401 ACSBG1Q96GR2 724 aa28.95■■■□□ 2.22
PKP3-211ENST00000534401 COL3A1P02461 1466 aaPredicted RBP28.95■■■□□ 2.22
PKP3-211ENST00000534401 NKX1-1Q15270 411 aaPredicted RBP28.94■■■□□ 2.22
PKP3-211ENST00000534401 PROM2Q8N271 834 aa28.94■■■□□ 2.22
PKP3-211ENST00000534401 DOT1LQ8TEK3 1739 aa28.92■■■□□ 2.22
PKP3-211ENST00000534401 SPG7Q9UQ90 795 aa28.92■■■□□ 2.22
PKP3-211ENST00000534401 PRIM1P49642 420 aaKnown RBP28.88■■■□□ 2.21
PKP3-211ENST00000534401 AEBP1Q8IUX7 1158 aa28.88■■■□□ 2.21
PKP3-211ENST00000534401 DIAPH1O60610 1272 aaKnown RBP28.87■■■□□ 2.21
PKP3-211ENST00000534401 PPP2R1AP30153 589 aa28.86■■■□□ 2.21
PKP3-211ENST00000534401 SULT6B1Q6IMI4 303 aa28.86■■■□□ 2.21
PKP3-211ENST00000534401 TOGARAM1Q9Y4F4 1720 aa28.86■■■□□ 2.21
PKP3-211ENST00000534401 TXNRD1Q16881 649 aa28.85■■■□□ 2.21
PKP3-211ENST00000534401 PHKG2P15735 406 aa28.84■■■□□ 2.21
PKP3-211ENST00000534401 IFNL2Q8IZJ0 200 aa28.84■■■□□ 2.21
PKP3-211ENST00000534401 ITGB4P16144 1822 aa28.84■■■□□ 2.21
PKP3-211ENST00000534401 CNGB1Q14028 1251 aaPredicted RBP28.83■■■□□ 2.21
PKP3-211ENST00000534401 AMOTQ4VCS5 1084 aa28.83■■■□□ 2.21
PKP3-211ENST00000534401 PLEKHO1Q53GL0 409 aaPredicted RBP28.82■■■□□ 2.2
PKP3-211ENST00000534401 LY75O60449 1722 aa28.81■■■□□ 2.2
PKP3-211ENST00000534401 DDX10Q13206 875 aaKnown RBP28.81■■■□□ 2.2
PKP3-211ENST00000534401 NBPF14Q5TI25 921 aa28.78■■■□□ 2.2
PKP3-211ENST00000534401 PAPPAQ13219 1627 aa28.77■■■□□ 2.2
PKP3-211ENST00000534401 R3HDM1Q15032 1099 aaKnown RBP28.77■■■□□ 2.2
PKP3-211ENST00000534401 SYTL4Q96C24 671 aaPredicted RBP28.77■■■□□ 2.2
PKP3-211ENST00000534401 PSDA5PKW4 1024 aaPredicted RBP28.76■■■□□ 2.19
PKP3-211ENST00000534401 CFAP53Q96M91 514 aa28.75■■■□□ 2.19
PKP3-211ENST00000534401 ANO8Q9HCE9 1232 aaPredicted RBP28.75■■■□□ 2.19
PKP3-211ENST00000534401 LRRC4BQ9NT99 713 aa28.75■■■□□ 2.19
PKP3-211ENST00000534401 SLC27A3Q5K4L6 730 aa28.74■■■□□ 2.19
PKP3-211ENST00000534401 ZNF530Q6P9A1 599 aaPredicted RBP28.74■■■□□ 2.19
PKP3-211ENST00000534401 HSP90AB1P08238 724 aaKnown RBP28.73■■■□□ 2.19
PKP3-211ENST00000534401 HMOX1P09601 288 aa28.73■■■□□ 2.19
PKP3-211ENST00000534401 PIGBQ92521 554 aa28.73■■■□□ 2.19
PKP3-211ENST00000534401 DCAF5Q96JK2 942 aa28.73■■■□□ 2.19
PKP3-211ENST00000534401 ERVV-2B6SEH9 535 aa28.72■■■□□ 2.19
PKP3-211ENST00000534401 RALBP1Q15311 655 aa28.72■■■□□ 2.19
PKP3-211ENST00000534401 KDM6AO15550 1401 aaPredicted RBP28.71■■■□□ 2.19
PKP3-211ENST00000534401 MPRIPQ6WCQ1 1025 aa28.7■■■□□ 2.18
PKP3-211ENST00000534401 SCN11AQ9UI33 1791 aa28.67■■■□□ 2.18
PKP3-211ENST00000534401 ADAMTS7Q9UKP4 1686 aa28.67■■■□□ 2.18
PKP3-211ENST00000534401 U2SURPO15042 1029 aaKnown RBP28.67■■■□□ 2.18
PKP3-211ENST00000534401 SLC15A2Q16348 729 aa28.67■■■□□ 2.18
PKP3-211ENST00000534401 AKAP4Q5JQC9 854 aa28.67■■■□□ 2.18
PKP3-211ENST00000534401 NUDCQ9Y266 331 aa28.67■■■□□ 2.18
PKP3-211ENST00000534401 LRP5O75197 1615 aa28.66■■■□□ 2.18
PKP3-211ENST00000534401 SMARCC1Q92922 1105 aaPredicted RBP28.66■■■□□ 2.18
PKP3-211ENST00000534401 RSPH6AQ9H0K4 717 aa28.66■■■□□ 2.18
PKP3-211ENST00000534401 CASZ1Q86V15 1759 aa28.65■■■□□ 2.18
PKP3-211ENST00000534401 MTHFSDQ2M296 383 aaKnown RBP28.65■■■□□ 2.18
PKP3-211ENST00000534401 C1orf141Q5JVX7 400 aa28.65■■■□□ 2.18
PKP3-211ENST00000534401 TMOD3Q9NYL9 352 aa28.65■■■□□ 2.18
PKP3-211ENST00000534401 PALLDQ8WX93 1383 aa28.64■■■□□ 2.18
PKP3-211ENST00000534401 AKT1S1Q96B36 256 aa28.64■■■□□ 2.18
PKP3-211ENST00000534401 STK32BQ9NY57 414 aa28.64■■■□□ 2.18
PKP3-211ENST00000534401 TAF1LQ8IZX4 1826 aa28.62■■■□□ 2.17
PKP3-211ENST00000534401 FCHSD2O94868 740 aa28.62■■■□□ 2.17
PKP3-211ENST00000534401 QSER1Q2KHR3 1735 aa28.62■■■□□ 2.17
PKP3-211ENST00000534401 VIRMAQ69YN4 1812 aaKnown RBP28.62■■■□□ 2.17
PKP3-211ENST00000534401 CCNL1Q9UK58 526 aaPredicted RBP28.61■■■□□ 2.17
PKP3-211ENST00000534401 ZNF316A6NFI3 1004 aaPredicted RBP28.6■■■□□ 2.17
PKP3-211ENST00000534401 ZNF827Q17R98 1081 aa28.6■■■□□ 2.17
PKP3-211ENST00000534401 ATG3Q9NT62 314 aa28.6■■■□□ 2.17
PKP3-211ENST00000534401 ASAP1Q9ULH1 1129 aa28.6■■■□□ 2.17
PKP3-211ENST00000534401 ZNF831Q5JPB2 1677 aa28.59■■■□□ 2.17
PKP3-211ENST00000534401 KCNQ4P56696 695 aa28.59■■■□□ 2.17
PKP3-211ENST00000534401 MRC1P22897 1456 aa28.59■■■□□ 2.17
PKP3-211ENST00000534401 HMGB2P26583 209 aaKnown RBP28.58■■■□□ 2.17
PKP3-211ENST00000534401 PHACTR3Q96KR7 559 aa28.58■■■□□ 2.17
PKP3-211ENST00000534401 RNMTO43148 476 aaKnown RBP28.57■■■□□ 2.16
PKP3-211ENST00000534401 U2AF1L5P0DN76 240 aaPredicted RBP28.57■■■□□ 2.16
PKP3-211ENST00000534401 PRKAR2BP31323 418 aa28.57■■■□□ 2.16
PKP3-211ENST00000534401 U2AF1Q01081 240 aaKnown RBP eCLIP28.57■■■□□ 2.16
PKP3-211ENST00000534401 LGR6Q9HBX8 967 aa28.57■■■□□ 2.16
PKP3-211ENST00000534401 MYBBP1AQ9BQG0 1328 aaKnown RBP28.57■■■□□ 2.16
PKP3-211ENST00000534401 C5P01031 1676 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms