RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 DOT1LQ8TEK3 1739 aa11.71□□□□□ -0.54
RPUSD4-209ENST00000534393 KIF24Q5T7B8 1368 aa11.7□□□□□ -0.54
RPUSD4-209ENST00000534393 SHANK3Q9BYB0 1731 aa11.7□□□□□ -0.54
RPUSD4-209ENST00000534393 PRIM1P49642 420 aaKnown RBP11.69□□□□□ -0.54
RPUSD4-209ENST00000534393 RAPGEF4Q8WZA2 1011 aa11.69□□□□□ -0.54
RPUSD4-209ENST00000534393 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
RPUSD4-209ENST00000534393 ARXQ96QS3 562 aa11.69□□□□□ -0.54
RPUSD4-209ENST00000534393 SGIP1Q9BQI5 828 aa11.69□□□□□ -0.54
RPUSD4-209ENST00000534393 SYT17Q9BSW7 474 aa11.69□□□□□ -0.54
RPUSD4-209ENST00000534393 FHDC1Q9C0D6 1143 aaPredicted RBP11.69□□□□□ -0.54
RPUSD4-209ENST00000534393 GGNBP2Q9H3C7 697 aa11.68□□□□□ -0.54
RPUSD4-209ENST00000534393 LRRC4BQ9NT99 713 aa11.68□□□□□ -0.54
RPUSD4-209ENST00000534393 COL24A1Q17RW2 1714 aa11.68□□□□□ -0.54
RPUSD4-209ENST00000534393 INSRP06213 1382 aa11.67□□□□□ -0.54
RPUSD4-209ENST00000534393 MAP3K5Q99683 1374 aa11.67□□□□□ -0.54
RPUSD4-209ENST00000534393 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
RPUSD4-209ENST00000534393 TATP17735 454 aaPredicted RBP11.67□□□□□ -0.54
RPUSD4-209ENST00000534393 FBLN1P23142 703 aa11.67□□□□□ -0.54
RPUSD4-209ENST00000534393 RRS1Q15050 365 aaKnown RBP11.67□□□□□ -0.54
RPUSD4-209ENST00000534393 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
RPUSD4-209ENST00000534393 TFCP2L1Q9NZI6 479 aa11.67□□□□□ -0.54
RPUSD4-209ENST00000534393 TUBGCP6Q96RT7 1819 aa11.67□□□□□ -0.54
RPUSD4-209ENST00000534393 FLT4P35916 1363 aa11.67□□□□□ -0.54
RPUSD4-209ENST00000534393 MEGF6O75095 1541 aa11.66□□□□□ -0.54
RPUSD4-209ENST00000534393 POLD1P28340 1107 aa11.66□□□□□ -0.54
RPUSD4-209ENST00000534393 ZNF827Q17R98 1081 aa11.66□□□□□ -0.54
RPUSD4-209ENST00000534393 NBPF6Q5VWK0 638 aa11.66□□□□□ -0.54
RPUSD4-209ENST00000534393 NBPF4Q96M43 638 aa11.66□□□□□ -0.54
RPUSD4-209ENST00000534393 UTRNP46939 3433 aa11.66□□□□□ -0.54
RPUSD4-209ENST00000534393 CLSPNQ9HAW4 1339 aa11.65□□□□□ -0.54
RPUSD4-209ENST00000534393 ITGB4P16144 1822 aa11.65□□□□□ -0.55
RPUSD4-209ENST00000534393 PCDH11XQ9BZA7 1347 aa11.64□□□□□ -0.55
RPUSD4-209ENST00000534393 PCDH11YQ9BZA8 1340 aa11.64□□□□□ -0.55
RPUSD4-209ENST00000534393 HSP90AB2PQ58FF8 381 aa11.64□□□□□ -0.55
RPUSD4-209ENST00000534393 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
RPUSD4-209ENST00000534393 TAF1LQ8IZX4 1826 aa11.64□□□□□ -0.55
RPUSD4-209ENST00000534393 NSD2O96028 1365 aa11.64□□□□□ -0.55
RPUSD4-209ENST00000534393 PNPLA7Q6ZV29 1317 aa11.63□□□□□ -0.55
RPUSD4-209ENST00000534393 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
RPUSD4-209ENST00000534393 C5P01031 1676 aa11.62□□□□□ -0.55
RPUSD4-209ENST00000534393 USHBP1Q8N6Y0 703 aa11.62□□□□□ -0.55
RPUSD4-209ENST00000534393 CCER1Q8TC90 406 aaPredicted RBP11.62□□□□□ -0.55
RPUSD4-209ENST00000534393 CARD14Q9BXL6 1004 aa11.62□□□□□ -0.55
RPUSD4-209ENST00000534393 PKD1L3Q7Z443 1732 aa11.62□□□□□ -0.55
RPUSD4-209ENST00000534393 NSD3Q9BZ95 1437 aa11.61□□□□□ -0.55
RPUSD4-209ENST00000534393 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
RPUSD4-209ENST00000534393 SMARCC1Q92922 1105 aaPredicted RBP11.61□□□□□ -0.55
RPUSD4-209ENST00000534393 KCNQ4P56696 695 aa11.6□□□□□ -0.55
RPUSD4-209ENST00000534393 GPR162Q16538 588 aa11.6□□□□□ -0.55
RPUSD4-209ENST00000534393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
RPUSD4-209ENST00000534393 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
RPUSD4-209ENST00000534393 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
RPUSD4-209ENST00000534393 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
RPUSD4-209ENST00000534393 MSH5O43196 834 aa11.59□□□□□ -0.55
RPUSD4-209ENST00000534393 MPRIPQ6WCQ1 1025 aa11.59□□□□□ -0.55
RPUSD4-209ENST00000534393 KLHL34Q8N239 644 aa11.59□□□□□ -0.55
RPUSD4-209ENST00000534393 EMILIN1Q9Y6C2 1016 aa11.59□□□□□ -0.55
RPUSD4-209ENST00000534393 NCAPD2Q15021 1401 aa11.59□□□□□ -0.55
RPUSD4-209ENST00000534393 PALLDQ8WX93 1383 aa11.58□□□□□ -0.56
RPUSD4-209ENST00000534393 CYP27B1O15528 508 aa11.58□□□□□ -0.56
RPUSD4-209ENST00000534393 ZNF784Q8NCA9 323 aaPredicted RBP11.58□□□□□ -0.56
RPUSD4-209ENST00000534393 TOGARAM1Q9Y4F4 1720 aa11.57□□□□□ -0.56
RPUSD4-209ENST00000534393 GOLGB1Q14789 3259 aaKnown RBP11.57□□□□□ -0.56
RPUSD4-209ENST00000534393 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
RPUSD4-209ENST00000534393 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
RPUSD4-209ENST00000534393 PLEKHG2Q9H7P9 1386 aa11.56□□□□□ -0.56
RPUSD4-209ENST00000534393 GRIN3BO60391 1043 aa11.56□□□□□ -0.56
RPUSD4-209ENST00000534393 C4BP0C0L5 1744 aa11.56□□□□□ -0.56
RPUSD4-209ENST00000534393 UBR3Q6ZT12 1888 aa11.56□□□□□ -0.56
RPUSD4-209ENST00000534393 EIF4G2P78344 907 aaKnown RBP eCLIP11.55□□□□□ -0.56
RPUSD4-209ENST00000534393 IFNL2Q8IZJ0 200 aa11.55□□□□□ -0.56
RPUSD4-209ENST00000534393 AK7Q96M32 723 aa11.55□□□□□ -0.56
RPUSD4-209ENST00000534393 EYA1Q99502 592 aa11.55□□□□□ -0.56
RPUSD4-209ENST00000534393 POLKQ9UBT6 870 aa11.55□□□□□ -0.56
RPUSD4-209ENST00000534393 PELP1Q8IZL8 1130 aaKnown RBP11.54□□□□□ -0.56
RPUSD4-209ENST00000534393 PIGBQ92521 554 aa11.54□□□□□ -0.56
RPUSD4-209ENST00000534393 POLR3GLQ9BT43 218 aa11.54□□□□□ -0.56
RPUSD4-209ENST00000534393 TMOD3Q9NYL9 352 aa11.54□□□□□ -0.56
RPUSD4-209ENST00000534393 CD2APQ9Y5K6 639 aa11.54□□□□□ -0.56
RPUSD4-209ENST00000534393 LOC102724428A0A0B4J2F2 783 aa11.52□□□□□ -0.57
RPUSD4-209ENST00000534393 HSP90AB1P08238 724 aaKnown RBP11.52□□□□□ -0.57
RPUSD4-209ENST00000534393 PHKG2P15735 406 aa11.52□□□□□ -0.57
RPUSD4-209ENST00000534393 SSFA2P28290 1259 aa11.52□□□□□ -0.57
RPUSD4-209ENST00000534393 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.57
RPUSD4-209ENST00000534393 SIK1P57059 783 aa11.52□□□□□ -0.57
RPUSD4-209ENST00000534393 NLGN2Q8NFZ4 835 aa11.52□□□□□ -0.57
RPUSD4-209ENST00000534393 EIF4A2Q14240 407 aaKnown RBP11.51□□□□□ -0.57
RPUSD4-209ENST00000534393 MSL1Q68DK7 614 aa11.51□□□□□ -0.57
RPUSD4-209ENST00000534393 ZNF831Q5JPB2 1677 aa11.51□□□□□ -0.57
RPUSD4-209ENST00000534393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.5□□□□□ -0.57
RPUSD4-209ENST00000534393 ERVV-2B6SEH9 535 aa11.5□□□□□ -0.57
RPUSD4-209ENST00000534393 TNNT2P45379 298 aaPredicted RBP11.5□□□□□ -0.57
RPUSD4-209ENST00000534393 PANK3Q9H999 370 aa11.5□□□□□ -0.57
RPUSD4-209ENST00000534393 HSPA5P11021 654 aaKnown RBP11.49□□□□□ -0.57
RPUSD4-209ENST00000534393 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
RPUSD4-209ENST00000534393 C1QTNF8P60827 252 aa11.49□□□□□ -0.57
RPUSD4-209ENST00000534393 AMOTQ4VCS5 1084 aa11.49□□□□□ -0.57
RPUSD4-209ENST00000534393 PLEKHO1Q53GL0 409 aaPredicted RBP11.49□□□□□ -0.57
RPUSD4-209ENST00000534393 IGSF1Q8N6C5 1336 aa11.49□□□□□ -0.57
RPUSD4-209ENST00000534393 PHF14O94880 888 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms