RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 TOR4AQ9NXH8 423 aa4.77□□□□□ -1.65
CSDE1-216ENST00000534389 FAM187AA6NFU0 413 aa4.76□□□□□ -1.65
CSDE1-216ENST00000534389 J3QL48 77 aa4.76□□□□□ -1.65
CSDE1-216ENST00000534389 UPP2O95045 317 aa4.76□□□□□ -1.65
CSDE1-216ENST00000534389 GTF2E1P29083 439 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-216ENST00000534389 NNTQ13423 1086 aa4.76□□□□□ -1.65
CSDE1-216ENST00000534389 INTS6LQ5JSJ4 861 aaKnown RBP4.76□□□□□ -1.65
CSDE1-216ENST00000534389 DIEXFQ68CQ4 756 aaKnown RBP4.76□□□□□ -1.65
CSDE1-216ENST00000534389 CC2D2BQ6DHV5 1058 aa4.76□□□□□ -1.65
CSDE1-216ENST00000534389 CCDC85AQ96PX6 553 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-216ENST00000534389 DNAAF2Q9NVR5 837 aaKnown RBP4.76□□□□□ -1.65
CSDE1-216ENST00000534389 EMILIN1Q9Y6C2 1016 aa4.76□□□□□ -1.65
CSDE1-216ENST00000534389 SMPD1P17405 629 aa4.75□□□□□ -1.65
CSDE1-216ENST00000534389 GTF2IP78347 998 aa4.75□□□□□ -1.65
CSDE1-216ENST00000534389 LAPTM4AQ15012 233 aa4.75□□□□□ -1.65
CSDE1-216ENST00000534389 PPP1R26Q5T8A7 1209 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-216ENST00000534389 CYP2U1Q7Z449 544 aa4.75□□□□□ -1.65
CSDE1-216ENST00000534389 PLEKHM2Q8IWE5 1019 aa4.75□□□□□ -1.65
CSDE1-216ENST00000534389 OGFOD1Q8N543 542 aa4.75□□□□□ -1.65
CSDE1-216ENST00000534389 FAM200AQ8TCP9 573 aa4.75□□□□□ -1.65
CSDE1-216ENST00000534389 CDK15Q96Q40 435 aa4.75□□□□□ -1.65
CSDE1-216ENST00000534389 TMPRSS4Q9NRS4 437 aa4.75□□□□□ -1.65
CSDE1-216ENST00000534389 ESPNB1AK53 854 aa4.74□□□□□ -1.65
CSDE1-216ENST00000534389 ZIC2O95409 532 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-216ENST00000534389 WDR4P57081 412 aaKnown RBP4.74□□□□□ -1.65
CSDE1-216ENST00000534389 PKDCCQ504Y2 493 aa4.74□□□□□ -1.65
CSDE1-216ENST00000534389 MPNDQ8N594 471 aa4.74□□□□□ -1.65
CSDE1-216ENST00000534389 ZNF784Q8NCA9 323 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-216ENST00000534389 HINFPQ9BQA5 517 aa4.74□□□□□ -1.65
CSDE1-216ENST00000534389 CDCA7Q9BWT1 371 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-216ENST00000534389 NOVA2Q9UNW9 492 aaKnown RBP4.74□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L15C9J2P7 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L10C9JJH3 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L13C9JLJ4 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L12C9JPN9 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L11C9JVI0 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L21D6R901 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L18D6R9N7 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L22D6RA61 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L17D6RBQ6 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L19D6RCP7 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L20D6RJB6 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 GRM5P41594 1212 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 USP17L24Q0WX57 530 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 TSGA10IPQ3SY00 556 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 PHTF2Q8N3S3 785 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 RETREG2Q8NC44 543 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 TPCN2Q8NHX9 752 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 HPS1Q92902 700 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 NLRP3Q96P20 1036 aa4.73□□□□□ -1.65
CSDE1-216ENST00000534389 FAM196BA6NMK8 535 aa4.72□□□□□ -1.65
CSDE1-216ENST00000534389 MEN1O00255 615 aa4.72□□□□□ -1.65
CSDE1-216ENST00000534389 DGAT1O75907 488 aa4.72□□□□□ -1.65
CSDE1-216ENST00000534389 NR3C2P08235 984 aa4.72□□□□□ -1.65
CSDE1-216ENST00000534389 DPYDQ12882 1025 aa4.72□□□□□ -1.65
CSDE1-216ENST00000534389 ESCO1Q5FWF5 840 aa4.72□□□□□ -1.65
CSDE1-216ENST00000534389 CCDC102BQ68D86 513 aa4.72□□□□□ -1.65
CSDE1-216ENST00000534389 TRAF7Q6Q0C0 670 aa4.72□□□□□ -1.65
CSDE1-216ENST00000534389 Q6ZNB5 142 aa4.72□□□□□ -1.65
CSDE1-216ENST00000534389 LARGE2Q8N3Y3 721 aa4.72□□□□□ -1.65
CSDE1-216ENST00000534389 ZBTB7CA1YPR0 619 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 BACH1O14867 736 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 ATG7O95352 703 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 SCTRP47872 440 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 SEC13P55735 322 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 RELBQ01201 579 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 B4GALNT3Q6L9W6 998 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 AEBP1Q8IUX7 1158 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 ANKMY2Q8IV38 441 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 VTI1AQ96AJ9 217 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 SERTAD1Q9UHV2 236 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 CHMP3Q9Y3E7 222 aa4.71□□□□□ -1.66
CSDE1-216ENST00000534389 CAPN5O15484 640 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-216ENST00000534389 ERVK-9P63128 1117 aa4.7□□□□□ -1.66
CSDE1-216ENST00000534389 CRTC2Q53ET0 693 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-216ENST00000534389 KANK4Q5T7N3 995 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-216ENST00000534389 ITPKCQ96DU7 683 aa4.7□□□□□ -1.66
CSDE1-216ENST00000534389 ARHGEF10LQ9HCE6 1279 aa4.7□□□□□ -1.66
CSDE1-216ENST00000534389 RAB6BQ9NRW1 208 aa4.7□□□□□ -1.66
CSDE1-216ENST00000534389 ST8SIA5O15466 376 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 GNRH1P01148 92 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 AVPP01185 164 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 ADH1AP07327 375 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 BMP2P12643 396 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 GDF10P55107 478 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 CLDN10P78369 228 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 CBLBQ13191 982 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 PTK7Q13308 1070 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 SCARF1Q14162 830 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 SLC27A3Q5K4L6 730 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 AGBL1Q96MI9 1066 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 YTHDC1Q96MU7 727 aaKnown RBP4.69□□□□□ -1.66
CSDE1-216ENST00000534389 ZNF395Q9H8N7 513 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-216ENST00000534389 ZFAND3Q9H8U3 227 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 POLMQ9NP87 494 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-216ENST00000534389 CHIC2Q9UKJ5 165 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 USTQ9Y2C2 406 aa4.69□□□□□ -1.66
CSDE1-216ENST00000534389 SFI1A8K8P3 1242 aa4.68□□□□□ -1.66
CSDE1-216ENST00000534389 LCE2BO14633 110 aa4.68□□□□□ -1.66
CSDE1-216ENST00000534389 AXIN1O15169 862 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms