RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 NFATC2IPQ8NCF5 419 aa8.3□□□□□ -1.08
ATPAF1-211ENST00000534216 GLMNQ92990 594 aa8.3□□□□□ -1.08
ATPAF1-211ENST00000534216 OSBPL3Q9H4L5 887 aa8.3□□□□□ -1.08
ATPAF1-211ENST00000534216 OXLD1Q5BKU9 147 aa8.29□□□□□ -1.08
ATPAF1-211ENST00000534216 ATP5J2-PTCD1G3V325 749 aa8.28□□□□□ -1.08
ATPAF1-211ENST00000534216 MYCP01106 439 aaPredicted RBP8.28□□□□□ -1.08
ATPAF1-211ENST00000534216 SKIP12755 728 aa8.28□□□□□ -1.08
ATPAF1-211ENST00000534216 USP4Q13107 963 aa8.28□□□□□ -1.08
ATPAF1-211ENST00000534216 UCN2Q96RP3 112 aa8.28□□□□□ -1.08
ATPAF1-211ENST00000534216 ESF1Q9H501 851 aaKnown RBP8.28□□□□□ -1.08
ATPAF1-211ENST00000534216 ZNF395Q9H8N7 513 aaPredicted RBP8.28□□□□□ -1.08
ATPAF1-211ENST00000534216 CYP2U1Q7Z449 544 aa8.27□□□□□ -1.09
ATPAF1-211ENST00000534216 CALR3Q96L12 384 aaKnown RBP8.27□□□□□ -1.09
ATPAF1-211ENST00000534216 INSM2Q96T92 566 aaPredicted RBP8.27□□□□□ -1.09
ATPAF1-211ENST00000534216 ZNF777Q9ULD5 760 aaPredicted RBP8.27□□□□□ -1.09
ATPAF1-211ENST00000534216 SOS2Q07890 1332 aaPredicted RBP8.27□□□□□ -1.09
ATPAF1-211ENST00000534216 SIRT1Q96EB6 747 aa8.26□□□□□ -1.09
ATPAF1-211ENST00000534216 TTLL8A6PVC2 850 aa8.25□□□□□ -1.09
ATPAF1-211ENST00000534216 CTSOP43234 321 aaPredicted RBP8.25□□□□□ -1.09
ATPAF1-211ENST00000534216 TBC1D9Q6ZT07 1266 aa8.25□□□□□ -1.09
ATPAF1-211ENST00000534216 A0A1W2PRU2 124 aa8.24□□□□□ -1.09
ATPAF1-211ENST00000534216 SOBPA7XYQ1 873 aa8.24□□□□□ -1.09
ATPAF1-211ENST00000534216 USP17L5A8MUK1 530 aa8.24□□□□□ -1.09
ATPAF1-211ENST00000534216 LZTS3O60299 673 aaPredicted RBP8.24□□□□□ -1.09
ATPAF1-211ENST00000534216 MAN1A2O60476 641 aa8.24□□□□□ -1.09
ATPAF1-211ENST00000534216 ZNF775Q96BV0 537 aaPredicted RBP8.24□□□□□ -1.09
ATPAF1-211ENST00000534216 DNMT3LQ9UJW3 386 aa8.24□□□□□ -1.09
ATPAF1-211ENST00000534216 ATP9BO43861 1147 aa8.23□□□□□ -1.09
ATPAF1-211ENST00000534216 GNRH1P01148 92 aa8.23□□□□□ -1.09
ATPAF1-211ENST00000534216 NCOA4Q13772 614 aa8.23□□□□□ -1.09
ATPAF1-211ENST00000534216 EML3Q32P44 896 aa8.23□□□□□ -1.09
ATPAF1-211ENST00000534216 C14orf37Q86TY3 774 aa8.23□□□□□ -1.09
ATPAF1-211ENST00000534216 DEPDC4Q8N2C3 294 aa8.23□□□□□ -1.09
ATPAF1-211ENST00000534216 ARHGEF10LQ9HCE6 1279 aa8.23□□□□□ -1.09
ATPAF1-211ENST00000534216 POLMQ9NP87 494 aaPredicted RBP8.23□□□□□ -1.09
ATPAF1-211ENST00000534216 MEN1O00255 615 aa8.22□□□□□ -1.09
ATPAF1-211ENST00000534216 CLN3Q13286 438 aa8.22□□□□□ -1.09
ATPAF1-211ENST00000534216 FOXD4L5Q5VV16 416 aaPredicted RBP8.22□□□□□ -1.09
ATPAF1-211ENST00000534216 PLEKHM2Q8IWE5 1019 aa8.22□□□□□ -1.09
ATPAF1-211ENST00000534216 USP17L3A6NCW0 530 aa8.21□□□□□ -1.1
ATPAF1-211ENST00000534216 USP17L4A6NCW7 530 aa8.21□□□□□ -1.1
ATPAF1-211ENST00000534216 FIGNL2A6NMB9 653 aa8.21□□□□□ -1.1
ATPAF1-211ENST00000534216 USP17L2Q6R6M4 530 aa8.21□□□□□ -1.1
ATPAF1-211ENST00000534216 USP17L1Q7RTZ2 530 aa8.21□□□□□ -1.1
ATPAF1-211ENST00000534216 RNF217Q8TC41 542 aa8.21□□□□□ -1.1
ATPAF1-211ENST00000534216 RAB6BQ9NRW1 208 aa8.21□□□□□ -1.1
ATPAF1-211ENST00000534216 TFIP11Q9UBB9 837 aaKnown RBP8.21□□□□□ -1.1
ATPAF1-211ENST00000534216 NOD1Q9Y239 953 aa8.21□□□□□ -1.1
ATPAF1-211ENST00000534216 PALM3A6NDB9 673 aaPredicted RBP8.2□□□□□ -1.1
ATPAF1-211ENST00000534216 RNF144AP50876 292 aaPredicted RBP8.2□□□□□ -1.1
ATPAF1-211ENST00000534216 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.2□□□□□ -1.1
ATPAF1-211ENST00000534216 NLRP3Q96P20 1036 aa8.2□□□□□ -1.1
ATPAF1-211ENST00000534216 PPP1R12CQ9BZL4 782 aa8.2□□□□□ -1.1
ATPAF1-211ENST00000534216 PCDHGA11Q9Y5H2 935 aa8.2□□□□□ -1.1
ATPAF1-211ENST00000534216 MAFBQ9Y5Q3 323 aaPredicted RBP8.2□□□□□ -1.1
ATPAF1-211ENST00000534216 STAU1O95793 577 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-211ENST00000534216 IL2RAP01589 272 aa8.19□□□□□ -1.1
ATPAF1-211ENST00000534216 GPC1P35052 558 aa8.19□□□□□ -1.1
ATPAF1-211ENST00000534216 CNKSR1Q969H4 720 aa8.19□□□□□ -1.1
ATPAF1-211ENST00000534216 ESYT1Q9BSJ8 1104 aa8.19□□□□□ -1.1
ATPAF1-211ENST00000534216 SCNN1DP51172 638 aa8.18□□□□□ -1.1
ATPAF1-211ENST00000534216 GTF2IP78347 998 aa8.18□□□□□ -1.1
ATPAF1-211ENST00000534216 ESCO1Q5FWF5 840 aa8.18□□□□□ -1.1
ATPAF1-211ENST00000534216 XAGE2Q96GT9 111 aa8.18□□□□□ -1.1
ATPAF1-211ENST00000534216 ETNK1Q9HBU6 452 aa8.18□□□□□ -1.1
ATPAF1-211ENST00000534216 HRH3Q9Y5N1 445 aa8.17□□□□□ -1.1
ATPAF1-211ENST00000534216 INHAP05111 366 aa8.16□□□□□ -1.1
ATPAF1-211ENST00000534216 GDF10P55107 478 aa8.16□□□□□ -1.1
ATPAF1-211ENST00000534216 CENPCQ03188 943 aa8.16□□□□□ -1.1
ATPAF1-211ENST00000534216 LYSMD3Q7Z3D4 306 aa8.16□□□□□ -1.1
ATPAF1-211ENST00000534216 TRIM50Q86XT4 487 aa8.16□□□□□ -1.1
ATPAF1-211ENST00000534216 GRIP2Q9C0E4 1043 aa8.16□□□□□ -1.1
ATPAF1-211ENST00000534216 NXF1Q9UBU9 619 aaKnown RBP8.16□□□□□ -1.1
ATPAF1-211ENST00000534216 MKRN1Q9UHC7 482 aaKnown RBP8.16□□□□□ -1.1
ATPAF1-211ENST00000534216 TMEM229AB2RXF0 380 aa8.15□□□□□ -1.1
ATPAF1-211ENST00000534216 WASLO00401 505 aaPredicted RBP8.15□□□□□ -1.1
ATPAF1-211ENST00000534216 PTSQ03393 145 aa8.15□□□□□ -1.1
ATPAF1-211ENST00000534216 SLC27A3Q5K4L6 730 aa8.15□□□□□ -1.1
ATPAF1-211ENST00000534216 CFAP70Q5T0N1 1121 aa8.15□□□□□ -1.1
ATPAF1-211ENST00000534216 ERICH6Q7L0X2 663 aa8.15□□□□□ -1.1
ATPAF1-211ENST00000534216 PRICKLE2Q7Z3G6 844 aa8.15□□□□□ -1.1
ATPAF1-211ENST00000534216 FHDC1Q9C0D6 1143 aaPredicted RBP8.15□□□□□ -1.1
ATPAF1-211ENST00000534216 ARID3CA6NKF2 412 aa8.14□□□□□ -1.11
ATPAF1-211ENST00000534216 TERTO14746 1132 aaKnown RBP8.14□□□□□ -1.11
ATPAF1-211ENST00000534216 LMOD1P29536 600 aaPredicted RBP8.14□□□□□ -1.11
ATPAF1-211ENST00000534216 CLDN10P78369 228 aa8.14□□□□□ -1.11
ATPAF1-211ENST00000534216 PSME1Q06323 249 aa8.14□□□□□ -1.11
ATPAF1-211ENST00000534216 ZBTB7BO15156 539 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-211ENST00000534216 ATP1A2P50993 1020 aa8.13□□□□□ -1.11
ATPAF1-211ENST00000534216 OGFOD1Q8N543 542 aa8.13□□□□□ -1.11
ATPAF1-211ENST00000534216 DNAAF2Q9NVR5 837 aaKnown RBP8.13□□□□□ -1.11
ATPAF1-211ENST00000534216 KIAA1024Q9UPX6 916 aa8.13□□□□□ -1.11
ATPAF1-211ENST00000534216 SPATA31C2B4DYI2 1134 aa8.12□□□□□ -1.11
ATPAF1-211ENST00000534216 RHOQP17081 205 aa8.12□□□□□ -1.11
ATPAF1-211ENST00000534216 NFX1Q12986 1120 aaKnown RBP8.12□□□□□ -1.11
ATPAF1-211ENST00000534216 TLR1Q15399 786 aa8.12□□□□□ -1.11
ATPAF1-211ENST00000534216 KANK4Q5T7N3 995 aaPredicted RBP8.12□□□□□ -1.11
ATPAF1-211ENST00000534216 NPAS3Q8IXF0 933 aa8.12□□□□□ -1.11
ATPAF1-211ENST00000534216 SLC4A9Q96Q91 983 aa8.12□□□□□ -1.11
ATPAF1-211ENST00000534216 ZSCAN10Q96SZ4 725 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms