RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 NBPF4Q96M43 638 aa15.74■□□□□ 0.11
CTSC-209ENST00000534131 EYA1Q99502 592 aa15.74■□□□□ 0.11
CTSC-209ENST00000534131 RGPD1P0DJD0 1748 aa15.74■□□□□ 0.11
CTSC-209ENST00000534131 COL3A1P02461 1466 aaPredicted RBP15.73■□□□□ 0.11
CTSC-209ENST00000534131 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
CTSC-209ENST00000534131 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
CTSC-209ENST00000534131 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
CTSC-209ENST00000534131 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
CTSC-209ENST00000534131 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
CTSC-209ENST00000534131 SULT6B1Q6IMI4 303 aa15.72■□□□□ 0.11
CTSC-209ENST00000534131 BARGINQ6ZT62 677 aa15.72■□□□□ 0.11
CTSC-209ENST00000534131 IL2RBP14784 551 aa15.71■□□□□ 0.11
CTSC-209ENST00000534131 USHBP1Q8N6Y0 703 aa15.71■□□□□ 0.11
CTSC-209ENST00000534131 GLI3P10071 1580 aa15.7■□□□□ 0.1
CTSC-209ENST00000534131 FAM98CQ17RN3 349 aaKnown RBP15.7■□□□□ 0.1
CTSC-209ENST00000534131 MIER1Q8N108 512 aa15.7■□□□□ 0.1
CTSC-209ENST00000534131 HMOX1P09601 288 aa15.69■□□□□ 0.1
CTSC-209ENST00000534131 KAT6BQ8WYB5 2073 aa15.68■□□□□ 0.1
CTSC-209ENST00000534131 EXOC5O00471 708 aa15.68■□□□□ 0.1
CTSC-209ENST00000534131 FCHSD2O94868 740 aa15.68■□□□□ 0.1
CTSC-209ENST00000534131 PLEKHO1Q53GL0 409 aaPredicted RBP15.67■□□□□ 0.1
CTSC-209ENST00000534131 SPG7Q9UQ90 795 aa15.67■□□□□ 0.1
CTSC-209ENST00000534131 NCAPD2Q15021 1401 aa15.67■□□□□ 0.1
CTSC-209ENST00000534131 PLEKHG2Q9H7P9 1386 aa15.66■□□□□ 0.1
CTSC-209ENST00000534131 PDE3BQ13370 1112 aa15.66■□□□□ 0.1
CTSC-209ENST00000534131 DDB1Q16531 1140 aa15.66■□□□□ 0.1
CTSC-209ENST00000534131 AMOTQ4VCS5 1084 aa15.66■□□□□ 0.1
CTSC-209ENST00000534131 BRWD3Q6RI45 1802 aa15.66■□□□□ 0.1
CTSC-209ENST00000534131 MAPK8IP3Q9UPT6 1336 aa15.66■□□□□ 0.1
CTSC-209ENST00000534131 KDRP35968 1356 aa15.65■□□□□ 0.1
CTSC-209ENST00000534131 THSD7AQ9UPZ6 1657 aa15.65■□□□□ 0.1
CTSC-209ENST00000534131 ONECUT3O60422 494 aaPredicted RBP15.65■□□□□ 0.1
CTSC-209ENST00000534131 SEPT12Q8IYM1 358 aa15.65■□□□□ 0.1
CTSC-209ENST00000534131 ATF5Q9Y2D1 282 aaPredicted RBP15.65■□□□□ 0.1
CTSC-209ENST00000534131 PRKAR2BP31323 418 aa15.64■□□□□ 0.09
CTSC-209ENST00000534131 CCDC184Q52MB2 194 aa15.64■□□□□ 0.09
CTSC-209ENST00000534131 PKD1L3Q7Z443 1732 aa15.64■□□□□ 0.09
CTSC-209ENST00000534131 AEBP1Q8IUX7 1158 aa15.64■□□□□ 0.09
CTSC-209ENST00000534131 FAM9BQ8IZU0 186 aa15.64■□□□□ 0.09
CTSC-209ENST00000534131 ZCRB1Q8TBF4 217 aaKnown RBP15.64■□□□□ 0.09
CTSC-209ENST00000534131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.64■□□□□ 0.09
CTSC-209ENST00000534131 DISP2A7MBM2 1401 aa15.63■□□□□ 0.09
CTSC-209ENST00000534131 PNISRQ8TF01 805 aaKnown RBP15.63■□□□□ 0.09
CTSC-209ENST00000534131 LRRC37A3O60309 1634 aa15.63■□□□□ 0.09
CTSC-209ENST00000534131 VIRMAQ69YN4 1812 aaKnown RBP15.63■□□□□ 0.09
CTSC-209ENST00000534131 MEGF6O75095 1541 aa15.63■□□□□ 0.09
CTSC-209ENST00000534131 OVOS2A0A0G2JMS6 1433 aa15.62■□□□□ 0.09
CTSC-209ENST00000534131 C1QBPQ07021 282 aaKnown RBP15.62■□□□□ 0.09
CTSC-209ENST00000534131 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
CTSC-209ENST00000534131 RSPH6AQ9H0K4 717 aa15.62■□□□□ 0.09
CTSC-209ENST00000534131 ADAMTS8Q9UP79 889 aa15.62■□□□□ 0.09
CTSC-209ENST00000534131 PCDH11XQ9BZA7 1347 aa15.62■□□□□ 0.09
CTSC-209ENST00000534131 PCDH11YQ9BZA8 1340 aa15.62■□□□□ 0.09
CTSC-209ENST00000534131 EP400Q96L91 3159 aa15.61■□□□□ 0.09
CTSC-209ENST00000534131 GAS2L2Q8NHY3 880 aa15.61■□□□□ 0.09
CTSC-209ENST00000534131 RUNDC1Q96C34 613 aa15.61■□□□□ 0.09
CTSC-209ENST00000534131 DLG5Q8TDM6 1919 aa15.6■□□□□ 0.09
CTSC-209ENST00000534131 TNS2Q63HR2 1409 aa15.6■□□□□ 0.09
CTSC-209ENST00000534131 KRT27Q7Z3Y8 459 aa15.6■□□□□ 0.09
CTSC-209ENST00000534131 IFNL2Q8IZJ0 200 aa15.6■□□□□ 0.09
CTSC-209ENST00000534131 DDX54Q8TDD1 881 aaKnown RBP15.6■□□□□ 0.09
CTSC-209ENST00000534131 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
CTSC-209ENST00000534131 ZNF530Q6P9A1 599 aaPredicted RBP15.59■□□□□ 0.09
CTSC-209ENST00000534131 SHANK3Q9BYB0 1731 aa15.59■□□□□ 0.09
CTSC-209ENST00000534131 AKAP4Q5JQC9 854 aa15.57■□□□□ 0.08
CTSC-209ENST00000534131 CCDC146Q8IYE0 955 aa15.57■□□□□ 0.08
CTSC-209ENST00000534131 MTHFSDQ2M296 383 aaKnown RBP15.56■□□□□ 0.08
CTSC-209ENST00000534131 RTF1Q92541 710 aaKnown RBP15.56■□□□□ 0.08
CTSC-209ENST00000534131 PLEKHF1Q96S99 279 aa15.56■□□□□ 0.08
CTSC-209ENST00000534131 LMOD3Q0VAK6 560 aa15.55■□□□□ 0.08
CTSC-209ENST00000534131 CCDC125Q86Z20 511 aa15.55■□□□□ 0.08
CTSC-209ENST00000534131 PHACTR3Q96KR7 559 aa15.55■□□□□ 0.08
CTSC-209ENST00000534131 SBF2Q86WG5 1849 aa15.54■□□□□ 0.08
CTSC-209ENST00000534131 SCN11AQ9UI33 1791 aa15.54■□□□□ 0.08
CTSC-209ENST00000534131 GNAT3A8MTJ3 354 aa15.54■□□□□ 0.08
CTSC-209ENST00000534131 PHKG2P15735 406 aa15.54■□□□□ 0.08
CTSC-209ENST00000534131 NFE2L2Q16236 605 aa15.54■□□□□ 0.08
CTSC-209ENST00000534131 FAM196AQ6ZSG2 479 aa15.54■□□□□ 0.08
CTSC-209ENST00000534131 ITGB4P16144 1822 aa15.53■□□□□ 0.08
CTSC-209ENST00000534131 MARCH10Q8NA82 808 aaPredicted RBP15.53■□□□□ 0.08
CTSC-209ENST00000534131 MAP3K5Q99683 1374 aa15.52■□□□□ 0.08
CTSC-209ENST00000534131 CYP27B1O15528 508 aa15.52■□□□□ 0.08
CTSC-209ENST00000534131 HTATSF1O43719 755 aaKnown RBP15.52■□□□□ 0.08
CTSC-209ENST00000534131 TMPOP42166 694 aaKnown RBP15.52■□□□□ 0.08
CTSC-209ENST00000534131 RIPK4P57078 832 aa15.52■□□□□ 0.08
CTSC-209ENST00000534131 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
CTSC-209ENST00000534131 DCAF5Q96JK2 942 aa15.52■□□□□ 0.08
CTSC-209ENST00000534131 DOT1LQ8TEK3 1739 aa15.51■□□□□ 0.07
CTSC-209ENST00000534131 APAF1O14727 1248 aa15.51■□□□□ 0.07
CTSC-209ENST00000534131 NKX1-1Q15270 411 aaPredicted RBP15.51■□□□□ 0.07
CTSC-209ENST00000534131 NEUROD2Q15784 382 aa15.51■□□□□ 0.07
CTSC-209ENST00000534131 SF3B2Q13435 895 aaKnown RBP15.5■□□□□ 0.07
CTSC-209ENST00000534131 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
CTSC-209ENST00000534131 MPRIPQ6WCQ1 1025 aa15.49■□□□□ 0.07
CTSC-209ENST00000534131 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
CTSC-209ENST00000534131 RNMTO43148 476 aaKnown RBP15.48■□□□□ 0.07
CTSC-209ENST00000534131 TEFQ10587 303 aa15.48■□□□□ 0.07
CTSC-209ENST00000534131 FAM182BQ5T319 152 aa15.48■□□□□ 0.07
CTSC-209ENST00000534131 SYTL4Q96C24 671 aaPredicted RBP15.48■□□□□ 0.07
CTSC-209ENST00000534131 RRP7AQ9Y3A4 280 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms