RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 POLKQ9UBT6 870 aa14.99□□□□□ -0.01
SDHD-208ENST00000534010 KCNQ2O43526 872 aa14.98□□□□□ -0.01
SDHD-208ENST00000534010 PANK3Q9H999 370 aa14.98□□□□□ -0.01
SDHD-208ENST00000534010 TOGARAM1Q9Y4F4 1720 aa14.97□□□□□ -0.01
SDHD-208ENST00000534010 PER1O15534 1290 aaPredicted RBP14.97□□□□□ -0.01
SDHD-208ENST00000534010 QSER1Q2KHR3 1735 aa14.97□□□□□ -0.01
SDHD-208ENST00000534010 PSDA5PKW4 1024 aaPredicted RBP14.96□□□□□ -0.01
SDHD-208ENST00000534010 AMER1Q5JTC6 1135 aaPredicted RBP14.96□□□□□ -0.01
SDHD-208ENST00000534010 LTV1Q96GA3 475 aaPredicted RBP14.96□□□□□ -0.01
SDHD-208ENST00000534010 KAT6BQ8WYB5 2073 aa14.96□□□□□ -0.02
SDHD-208ENST00000534010 R3HDM1Q15032 1099 aaKnown RBP14.95□□□□□ -0.02
SDHD-208ENST00000534010 ANO8Q9HCE9 1232 aaPredicted RBP14.95□□□□□ -0.02
SDHD-208ENST00000534010 COL24A1Q17RW2 1714 aa14.95□□□□□ -0.02
SDHD-208ENST00000534010 ZCRB1Q8TBF4 217 aaKnown RBP14.94□□□□□ -0.02
SDHD-208ENST00000534010 ITGB4P16144 1822 aa14.94□□□□□ -0.02
SDHD-208ENST00000534010 TXNRD1Q16881 649 aa14.92□□□□□ -0.02
SDHD-208ENST00000534010 USHBP1Q8N6Y0 703 aa14.92□□□□□ -0.02
SDHD-208ENST00000534010 NPC1L1Q9UHC9 1359 aa14.92□□□□□ -0.02
SDHD-208ENST00000534010 TUBGCP6Q96RT7 1819 aa14.92□□□□□ -0.02
SDHD-208ENST00000534010 EYA1Q99502 592 aa14.91□□□□□ -0.02
SDHD-208ENST00000534010 IGSF1Q8N6C5 1336 aa14.91□□□□□ -0.02
SDHD-208ENST00000534010 CYP27B1O15528 508 aa14.9□□□□□ -0.02
SDHD-208ENST00000534010 EIF4A2Q14240 407 aaKnown RBP14.9□□□□□ -0.02
SDHD-208ENST00000534010 NKX1-1Q15270 411 aaPredicted RBP14.9□□□□□ -0.02
SDHD-208ENST00000534010 ACSBG1Q96GR2 724 aa14.9□□□□□ -0.02
SDHD-208ENST00000534010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.9□□□□□ -0.02
SDHD-208ENST00000534010 TAF1LQ8IZX4 1826 aa14.89□□□□□ -0.03
SDHD-208ENST00000534010 NBPF14Q5TI25 921 aa14.89□□□□□ -0.03
SDHD-208ENST00000534010 LRRC4BQ9NT99 713 aa14.89□□□□□ -0.03
SDHD-208ENST00000534010 KDRP35968 1356 aa14.88□□□□□ -0.03
SDHD-208ENST00000534010 DDX54Q8TDD1 881 aaKnown RBP14.88□□□□□ -0.03
SDHD-208ENST00000534010 RAPGEF4Q8WZA2 1011 aa14.88□□□□□ -0.03
SDHD-208ENST00000534010 PCDH11XQ9BZA7 1347 aa14.88□□□□□ -0.03
SDHD-208ENST00000534010 PCDH11YQ9BZA8 1340 aa14.88□□□□□ -0.03
SDHD-208ENST00000534010 TATP17735 454 aaPredicted RBP14.87□□□□□ -0.03
SDHD-208ENST00000534010 UTRNP46939 3433 aa14.87□□□□□ -0.03
SDHD-208ENST00000534010 PRIM1P49642 420 aaKnown RBP14.86□□□□□ -0.03
SDHD-208ENST00000534010 SLC15A2Q16348 729 aa14.86□□□□□ -0.03
SDHD-208ENST00000534010 POLR3GLQ9BT43 218 aa14.86□□□□□ -0.03
SDHD-208ENST00000534010 COL3A1P02461 1466 aaPredicted RBP14.85□□□□□ -0.03
SDHD-208ENST00000534010 SLC27A3Q5K4L6 730 aa14.85□□□□□ -0.03
SDHD-208ENST00000534010 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
SDHD-208ENST00000534010 PDGFDQ9GZP0 370 aaPredicted RBP14.85□□□□□ -0.03
SDHD-208ENST00000534010 KNSTRNQ9Y448 316 aa14.85□□□□□ -0.03
SDHD-208ENST00000534010 ZNF831Q5JPB2 1677 aa14.84□□□□□ -0.03
SDHD-208ENST00000534010 SGIP1Q9BQI5 828 aa14.84□□□□□ -0.03
SDHD-208ENST00000534010 C5P01031 1676 aa14.84□□□□□ -0.03
SDHD-208ENST00000534010 ZNF827Q17R98 1081 aa14.83□□□□□ -0.04
SDHD-208ENST00000534010 ADAMTS7Q9UKP4 1686 aa14.83□□□□□ -0.04
SDHD-208ENST00000534010 PPM1GO15355 546 aaPredicted RBP14.82□□□□□ -0.04
SDHD-208ENST00000534010 IL13P35225 146 aa14.82□□□□□ -0.04
SDHD-208ENST00000534010 PTGER2P43116 358 aa14.82□□□□□ -0.04
SDHD-208ENST00000534010 TNNT2P45379 298 aaPredicted RBP14.82□□□□□ -0.04
SDHD-208ENST00000534010 MORC1Q86VD1 984 aa14.82□□□□□ -0.04
SDHD-208ENST00000534010 CICQ96RK0 1608 aaPredicted RBP14.81□□□□□ -0.04
SDHD-208ENST00000534010 GOLGB1Q14789 3259 aaKnown RBP14.81□□□□□ -0.04
SDHD-208ENST00000534010 PHKG2P15735 406 aa14.8□□□□□ -0.04
SDHD-208ENST00000534010 SCN11AQ9UI33 1791 aa14.8□□□□□ -0.04
SDHD-208ENST00000534010 VIRMAQ69YN4 1812 aaKnown RBP14.8□□□□□ -0.04
SDHD-208ENST00000534010 UBR3Q6ZT12 1888 aa14.8□□□□□ -0.04
SDHD-208ENST00000534010 KDM6AO15550 1401 aaPredicted RBP14.79□□□□□ -0.04
SDHD-208ENST00000534010 SPON1Q9HCB6 807 aa14.79□□□□□ -0.04
SDHD-208ENST00000534010 STK32BQ9NY57 414 aa14.79□□□□□ -0.04
SDHD-208ENST00000534010 SPG7Q9UQ90 795 aa14.79□□□□□ -0.04
SDHD-208ENST00000534010 PIGBQ92521 554 aa14.78□□□□□ -0.04
SDHD-208ENST00000534010 C4BP0C0L5 1744 aa14.78□□□□□ -0.04
SDHD-208ENST00000534010 PNPLA7Q6ZV29 1317 aa14.77□□□□□ -0.04
SDHD-208ENST00000534010 AEBP1Q8IUX7 1158 aa14.77□□□□□ -0.05
SDHD-208ENST00000534010 IFNL2Q8IZJ0 200 aa14.77□□□□□ -0.05
SDHD-208ENST00000534010 PALLDQ8WX93 1383 aa14.76□□□□□ -0.05
SDHD-208ENST00000534010 COL5A3P25940 1745 aaPredicted RBP14.76□□□□□ -0.05
SDHD-208ENST00000534010 MTHFSP49914 203 aa14.76□□□□□ -0.05
SDHD-208ENST00000534010 MTFR1LQ9H019 292 aa14.76□□□□□ -0.05
SDHD-208ENST00000534010 MAP3K5Q99683 1374 aa14.75□□□□□ -0.05
SDHD-208ENST00000534010 SYTL4Q96C24 671 aaPredicted RBP14.75□□□□□ -0.05
SDHD-208ENST00000534010 MRC1P22897 1456 aa14.75□□□□□ -0.05
SDHD-208ENST00000534010 KCNQ4P56696 695 aa14.74□□□□□ -0.05
SDHD-208ENST00000534010 AMOTQ4VCS5 1084 aa14.74□□□□□ -0.05
SDHD-208ENST00000534010 SLC16A10Q8TF71 515 aa14.74□□□□□ -0.05
SDHD-208ENST00000534010 ERVV-2B6SEH9 535 aa14.73□□□□□ -0.05
SDHD-208ENST00000534010 SMARCC1Q92922 1105 aaPredicted RBP14.73□□□□□ -0.05
SDHD-208ENST00000534010 CCNL1Q9UK58 526 aaPredicted RBP14.73□□□□□ -0.05
SDHD-208ENST00000534010 ZBTB7AO95365 584 aa14.72□□□□□ -0.05
SDHD-208ENST00000534010 SULT6B1Q6IMI4 303 aa14.72□□□□□ -0.05
SDHD-208ENST00000534010 MPRIPQ6WCQ1 1025 aa14.72□□□□□ -0.05
SDHD-208ENST00000534010 DCAF5Q96JK2 942 aa14.72□□□□□ -0.05
SDHD-208ENST00000534010 MYH14Q7Z406 1995 aaKnown RBP14.72□□□□□ -0.05
SDHD-208ENST00000534010 PLEKHO1Q53GL0 409 aaPredicted RBP14.71□□□□□ -0.05
SDHD-208ENST00000534010 CC2D1BQ5T0F9 858 aaKnown RBP14.71□□□□□ -0.05
SDHD-208ENST00000534010 SLC4A9Q96Q91 983 aa14.71□□□□□ -0.05
SDHD-208ENST00000534010 ATG3Q9NT62 314 aa14.71□□□□□ -0.05
SDHD-208ENST00000534010 SIPA1L3O60292 1781 aaPredicted RBP14.7□□□□□ -0.06
SDHD-208ENST00000534010 HSP90AB1P08238 724 aaKnown RBP14.7□□□□□ -0.06
SDHD-208ENST00000534010 AMIGO3Q86WK7 504 aa14.7□□□□□ -0.06
SDHD-208ENST00000534010 ASAP1Q9ULH1 1129 aa14.7□□□□□ -0.06
SDHD-208ENST00000534010 UBR2Q8IWV8 1755 aa14.7□□□□□ -0.06
SDHD-208ENST00000534010 TJP1Q07157 1748 aa14.69□□□□□ -0.06
SDHD-208ENST00000534010 LOC102724428A0A0B4J2F2 783 aa14.68□□□□□ -0.06
SDHD-208ENST00000534010 DIAPH1O60610 1272 aaKnown RBP14.68□□□□□ -0.06
SDHD-208ENST00000534010 HMGB2P26583 209 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms