RNA–Protein interactions for RNA: ENST00000533668.5

FGFR1-240, Transcript of fibroblast growth factor receptor 1, human

TSL 5

Gene FGFR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-240	ENST00000533668	USP35	Q9P2H5	1018 aa		11.8	□□□□□ -0.52
FGFR1-240	ENST00000533668	PARP4	Q9UKK3	1724 aa	Known RBP	11.8	□□□□□ -0.52
FGFR1-240	ENST00000533668	PPIP5K1	Q6PFW1	1433 aa		11.79	□□□□□ -0.52
FGFR1-240	ENST00000533668	EN1	Q05925	392 aa	Predicted RBP	11.79	□□□□□ -0.52
FGFR1-240	ENST00000533668	ACE	P12821	1306 aa		11.79	□□□□□ -0.52
FGFR1-240	ENST00000533668	SBF2	Q86WG5	1849 aa		11.79	□□□□□ -0.52
FGFR1-240	ENST00000533668	TRPM1	Q7Z4N2	1603 aa		11.78	□□□□□ -0.52
FGFR1-240	ENST00000533668	ZBTB7C	A1YPR0	619 aa		11.78	□□□□□ -0.52
FGFR1-240	ENST00000533668	EVA1C	P58658	441 aa		11.78	□□□□□ -0.52
FGFR1-240	ENST00000533668	SRPK2	P78362	688 aa	Known RBP	11.78	□□□□□ -0.52
FGFR1-240	ENST00000533668	ABTB2	Q8N961	1025 aa		11.78	□□□□□ -0.52
FGFR1-240	ENST00000533668	SPATA31A1	Q5TZJ5	1347 aa		11.78	□□□□□ -0.52
FGFR1-240	ENST00000533668	POLR3A	O14802	1390 aa	Predicted RBP	11.78	□□□□□ -0.52
FGFR1-240	ENST00000533668	SSH2	Q76I76	1423 aa		11.77	□□□□□ -0.52
FGFR1-240	ENST00000533668	HRC	P23327	699 aa		11.77	□□□□□ -0.53
FGFR1-240	ENST00000533668	PIK3C2A	O00443	1686 aa		11.77	□□□□□ -0.53
FGFR1-240	ENST00000533668	CAMTA1	Q9Y6Y1	1673 aa		11.77	□□□□□ -0.53
FGFR1-240	ENST00000533668	NBPF8	Q3BBV2	869 aa		11.76	□□□□□ -0.53
FGFR1-240	ENST00000533668	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.76	□□□□□ -0.53
FGFR1-240	ENST00000533668	LRRC37A3	O60309	1634 aa		11.75	□□□□□ -0.53
FGFR1-240	ENST00000533668	TRIM37	O94972	964 aa		11.75	□□□□□ -0.53
FGFR1-240	ENST00000533668	NBPF1	Q3BBV0	1214 aa		11.75	□□□□□ -0.53
FGFR1-240	ENST00000533668	PDE3B	Q13370	1112 aa		11.74	□□□□□ -0.53
FGFR1-240	ENST00000533668	R3HDM1	Q15032	1099 aa	Known RBP	11.74	□□□□□ -0.53
FGFR1-240	ENST00000533668	EZH2	Q15910	746 aa	Known RBP	11.74	□□□□□ -0.53
FGFR1-240	ENST00000533668	DISP2	A7MBM2	1401 aa		11.74	□□□□□ -0.53
FGFR1-240	ENST00000533668	COL5A2	P05997	1499 aa	Predicted RBP	11.73	□□□□□ -0.53
FGFR1-240	ENST00000533668	LARP1	Q6PKG0	1096 aa	Known RBP	11.73	□□□□□ -0.53
FGFR1-240	ENST00000533668	FAM196A	Q6ZSG2	479 aa		11.73	□□□□□ -0.53
FGFR1-240	ENST00000533668	NLRP13	Q86W25	1043 aa		11.73	□□□□□ -0.53
FGFR1-240	ENST00000533668	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.72	□□□□□ -0.53
FGFR1-240	ENST00000533668	LTN1	O94822	1766 aa		11.72	□□□□□ -0.53
FGFR1-240	ENST00000533668	COL18A1	P39060	1754 aa		11.72	□□□□□ -0.53
FGFR1-240	ENST00000533668	RGPD4	Q7Z3J3	1758 aa		11.72	□□□□□ -0.53
FGFR1-240	ENST00000533668	MON2	Q7Z3U7	1717 aa		11.72	□□□□□ -0.53
FGFR1-240	ENST00000533668	USP19	O94966	1318 aa		11.72	□□□□□ -0.53
FGFR1-240	ENST00000533668	PLEKHG3	A1L390	1219 aa		11.72	□□□□□ -0.53
FGFR1-240	ENST00000533668	APBA3	O96018	575 aa		11.72	□□□□□ -0.53
FGFR1-240	ENST00000533668	SLIT3	O75094	1523 aa		11.71	□□□□□ -0.53
FGFR1-240	ENST00000533668	CPD	O75976	1380 aa		11.71	□□□□□ -0.53
FGFR1-240	ENST00000533668	TCP11L2	Q8N4U5	519 aa		11.71	□□□□□ -0.53
FGFR1-240	ENST00000533668	PEAK1	Q9H792	1746 aa		11.71	□□□□□ -0.54
FGFR1-240	ENST00000533668	KAT6B	Q8WYB5	2073 aa		11.71	□□□□□ -0.54
FGFR1-240	ENST00000533668	USP6	P35125	1406 aa		11.7	□□□□□ -0.54
FGFR1-240	ENST00000533668	HOXB3	P14651	431 aa	Predicted RBP	11.7	□□□□□ -0.54
FGFR1-240	ENST00000533668	BARGIN	Q6ZT62	677 aa		11.7	□□□□□ -0.54
FGFR1-240	ENST00000533668	CRB1	P82279	1406 aa		11.69	□□□□□ -0.54
FGFR1-240	ENST00000533668	PARD3	Q8TEW0	1356 aa		11.69	□□□□□ -0.54
FGFR1-240	ENST00000533668	SRCAP	Q6ZRS2	3230 aa		11.69	□□□□□ -0.54
FGFR1-240	ENST00000533668	GC	P02774	474 aa		11.69	□□□□□ -0.54
FGFR1-240	ENST00000533668	BRD4	O60885	1362 aa	Predicted RBP	11.68	□□□□□ -0.54
FGFR1-240	ENST00000533668	EVC2	Q86UK5	1308 aa		11.68	□□□□□ -0.54
FGFR1-240	ENST00000533668	MARVELD3	Q96A59	401 aa		11.68	□□□□□ -0.54
FGFR1-240	ENST00000533668	CAMKK2	Q96RR4	588 aa		11.68	□□□□□ -0.54
FGFR1-240	ENST00000533668	RYDEN	Q9NUL5	291 aa	Known RBP	11.68	□□□□□ -0.54
FGFR1-240	ENST00000533668	CABP1	Q9NZU7	370 aa		11.68	□□□□□ -0.54
FGFR1-240	ENST00000533668	OVOS2	A0A0G2JMS6	1433 aa		11.68	□□□□□ -0.54
FGFR1-240	ENST00000533668	OVOS2	A0A0J9YW53	1432 aa		11.68	□□□□□ -0.54
FGFR1-240	ENST00000533668	OVOS2	Q6IE36	1432 aa		11.68	□□□□□ -0.54
FGFR1-240	ENST00000533668	ROCK2	O75116	1388 aa	Known RBP	11.67	□□□□□ -0.54
FGFR1-240	ENST00000533668	C2orf72	A6NCS6	295 aa		11.67	□□□□□ -0.54
FGFR1-240	ENST00000533668	DOK7	Q18PE1	504 aa		11.67	□□□□□ -0.54
FGFR1-240	ENST00000533668	TOM1L2	Q6ZVM7	507 aa		11.67	□□□□□ -0.54
FGFR1-240	ENST00000533668	ZNF710	Q8N1W2	664 aa		11.67	□□□□□ -0.54
FGFR1-240	ENST00000533668	THRAP3	Q9Y2W1	955 aa	Known RBP	11.67	□□□□□ -0.54
FGFR1-240	ENST00000533668	NEUROD1	Q13562	356 aa		11.66	□□□□□ -0.54
FGFR1-240	ENST00000533668	NBPF14	Q5TI25	921 aa		11.66	□□□□□ -0.54
FGFR1-240	ENST00000533668	L3MBTL2	Q969R5	705 aa		11.66	□□□□□ -0.54
FGFR1-240	ENST00000533668	CPSF1	Q10570	1443 aa	Known RBP	11.66	□□□□□ -0.54
FGFR1-240	ENST00000533668	GTPBP6	O43824	516 aa	Predicted RBP	11.65	□□□□□ -0.54
FGFR1-240	ENST00000533668	SIN3A	Q96ST3	1273 aa		11.65	□□□□□ -0.54
FGFR1-240	ENST00000533668	AATK	Q6ZMQ8	1374 aa		11.65	□□□□□ -0.55
FGFR1-240	ENST00000533668	USP54	Q70EL1	1684 aa		11.65	□□□□□ -0.55
FGFR1-240	ENST00000533668	KIF3C	O14782	793 aa		11.64	□□□□□ -0.55
FGFR1-240	ENST00000533668	CSB-PGBD3	P0DP91	1061 aa		11.64	□□□□□ -0.55
FGFR1-240	ENST00000533668	DDB1	Q16531	1140 aa		11.64	□□□□□ -0.55
FGFR1-240	ENST00000533668	TMC2	Q8TDI7	906 aa		11.64	□□□□□ -0.55
FGFR1-240	ENST00000533668	CASZ1	Q86V15	1759 aa		11.64	□□□□□ -0.55
FGFR1-240	ENST00000533668	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.63	□□□□□ -0.55
FGFR1-240	ENST00000533668	KTN1	Q86UP2	1357 aa	Known RBP	11.63	□□□□□ -0.55
FGFR1-240	ENST00000533668	WDR17	Q8IZU2	1322 aa		11.62	□□□□□ -0.55
FGFR1-240	ENST00000533668	NHS	Q6T4R5	1651 aa		11.62	□□□□□ -0.55
FGFR1-240	ENST00000533668	NFAT5	O94916	1531 aa		11.62	□□□□□ -0.55
FGFR1-240	ENST00000533668	C11orf95	C9JLR9	678 aa	Predicted RBP	11.62	□□□□□ -0.55
FGFR1-240	ENST00000533668	FAM208A	Q9UK61	1670 aa	Known RBP	11.62	□□□□□ -0.55
FGFR1-240	ENST00000533668	TTC21B	Q7Z4L5	1316 aa		11.61	□□□□□ -0.55
FGFR1-240	ENST00000533668	BTAF1	O14981	1849 aa		11.61	□□□□□ -0.55
FGFR1-240	ENST00000533668	RIMBP2	O15034	1052 aa		11.61	□□□□□ -0.55
FGFR1-240	ENST00000533668	EMP3	P54852	163 aa		11.61	□□□□□ -0.55
FGFR1-240	ENST00000533668	KCNH5	Q8NCM2	988 aa		11.61	□□□□□ -0.55
FGFR1-240	ENST00000533668	MYOM1	P52179	1685 aa		11.61	□□□□□ -0.55
FGFR1-240	ENST00000533668	TTC21A	Q8NDW8	1320 aa		11.6	□□□□□ -0.55
FGFR1-240	ENST00000533668	ABCC6	O95255	1503 aa		11.6	□□□□□ -0.55
FGFR1-240	ENST00000533668	RGPD2	P0DJD1	1756 aa		11.59	□□□□□ -0.55
FGFR1-240	ENST00000533668	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
FGFR1-240	ENST00000533668	AXIN2	Q9Y2T1	843 aa		11.59	□□□□□ -0.55
FGFR1-240	ENST00000533668	ARHGEF25	Q86VW2	580 aa		11.58	□□□□□ -0.56
FGFR1-240	ENST00000533668	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.58	□□□□□ -0.56
FGFR1-240	ENST00000533668	SPON1	Q9HCB6	807 aa		11.58	□□□□□ -0.56
FGFR1-240	ENST00000533668	TNS2	Q63HR2	1409 aa		11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms