RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, human

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN1-215	ENST00000533657	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	NUTM2E	B1AL46	878 aa	Predicted RBP	13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	ADAMTS2	O95450	1211 aa		13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	PRKAR2B	P31323	418 aa		13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	SPATA31A1	Q5TZJ5	1347 aa		13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	AEBP1	Q8IUX7	1158 aa		13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	FANCI	Q9NVI1	1328 aa		13.53	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	AMOT	Q4VCS5	1084 aa		13.53	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	BARGIN	Q6ZT62	677 aa		13.53	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	MAPK8IP3	Q9UPT6	1336 aa		13.53	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	LTV1	Q96GA3	475 aa	Predicted RBP	13.53	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	ZNF521	Q96K83	1311 aa		13.52	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	HTATSF1	O43719	755 aa	Known RBP	13.52	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	NEFM	P07197	916 aa		13.52	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	EVA1C	P58658	441 aa		13.52	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	NFE2L2	Q16236	605 aa		13.52	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	LARP1	Q6PKG0	1096 aa	Known RBP	13.52	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	TNS2	Q63HR2	1409 aa		13.52	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	MRC1	P22897	1456 aa		13.52	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	PLEKHG5	O94827	1062 aa		13.52	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	HMOX1	P09601	288 aa		13.52	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	CSB-PGBD3	P0DP91	1061 aa		13.52	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	GAS2L2	Q8NHY3	880 aa		13.52	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	TOM1L2	Q6ZVM7	507 aa		13.51	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	NLRP2	Q9NX02	1062 aa		13.51	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	TCP11L2	Q8N4U5	519 aa		13.51	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	TMPO	P42166	694 aa	Known RBP	13.5	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	NGLY1	Q96IV0	654 aa		13.5	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	LMOD3	Q0VAK6	560 aa		13.5	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	MEX3C	Q5U5Q3	659 aa	Known RBP	13.5	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	PKNOX2	Q96KN3	472 aa		13.5	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	C8orf37	Q96NL8	207 aa		13.5	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	AFF2	P51816	1311 aa		13.5	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	TAT	P17735	454 aa	Predicted RBP	13.49	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.49	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	IL2RB	P14784	551 aa		13.49	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	CCDC146	Q8IYE0	955 aa		13.49	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	RAPGEF4	Q8WZA2	1011 aa		13.49	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	PHACTR3	Q96KR7	559 aa		13.49	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	USP21	Q9UK80	565 aa		13.49	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	PAPPA	Q13219	1627 aa		13.49	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	STRN4	Q9NRL3	753 aa		13.49	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	IL16	Q14005	1332 aa		13.48	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	MAP3K5	Q99683	1374 aa		13.48	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	KDM3B	Q7LBC6	1761 aa		13.48	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	APAF1	O14727	1248 aa		13.48	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	PDE3B	Q13370	1112 aa		13.48	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	USHBP1	Q8N6Y0	703 aa		13.48	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	TOGARAM1	Q9Y4F4	1720 aa		13.48	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	SPG7	Q9UQ90	795 aa		13.48	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	WDR63	Q8IWG1	891 aa		13.47	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	TRPC5	Q9UL62	973 aa	Predicted RBP	13.47	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	BCL9	O00512	1426 aa		13.47	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	CEMIP	Q8WUJ3	1361 aa		13.47	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	ONECUT3	O60422	494 aa	Predicted RBP	13.47	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	MTHFSD	Q2M296	383 aa	Known RBP	13.47	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	PCDH11X	Q9BZA7	1347 aa		13.46	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	PCDH11Y	Q9BZA8	1340 aa		13.46	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	AKAP4	Q5JQC9	854 aa		13.46	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	ZNF772	Q68DY9	489 aa	Predicted RBP	13.46	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	TRIM35	Q9UPQ4	493 aa		13.46	□□□□□ -0.25
CAPRIN1-215	ENST00000533657	NKX1-1	Q15270	411 aa	Predicted RBP	13.45	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	CALD1	Q05682	793 aa	Known RBP	13.45	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	WWC1	Q8IX03	1113 aa		13.44	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	CIC	Q96RK0	1608 aa	Predicted RBP	13.44	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	HSP90AB1	P08238	724 aa	Known RBP	13.44	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	RIPK4	P57078	832 aa		13.44	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	FKBP8	Q14318	412 aa		13.44	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	BABAM1	Q9NWV8	329 aa		13.44	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	UBR2	Q8IWV8	1755 aa		13.44	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	GNAT3	A8MTJ3	354 aa		13.43	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	DOT1L	Q8TEK3	1739 aa		13.43	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	GJD4	Q96KN9	370 aa	Predicted RBP	13.43	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	KDM6A	O15550	1401 aa	Predicted RBP	13.43	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	ITGB4	P16144	1822 aa		13.43	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	ZCRB1	Q8TBF4	217 aa	Known RBP	13.43	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	NHS	Q6T4R5	1651 aa		13.43	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	PHKG2	P15735	406 aa		13.43	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	TRMT2A	Q8IZ69	625 aa	Known RBP	13.42	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	IFNL2	Q8IZJ0	200 aa		13.42	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	BRWD3	Q6RI45	1802 aa		13.42	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.42	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	ZNF831	Q5JPB2	1677 aa		13.42	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.41	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	SBF2	Q86WG5	1849 aa		13.41	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	NEFL	P07196	543 aa		13.41	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	C1orf141	Q5JVX7	400 aa		13.41	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	CYP27B1	O15528	508 aa		13.4	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	ZNF853	P0CG23	659 aa		13.4	□□□□□ -0.26
CAPRIN1-215	ENST00000533657	DCAF5	Q96JK2	942 aa		13.4	□□□□□ -0.26
CAPRIN1-215	ENST00000533657		E9PSI1	815 aa		13.39	□□□□□ -0.27
CAPRIN1-215	ENST00000533657	GOLGA2	Q08379	1002 aa		13.39	□□□□□ -0.27
CAPRIN1-215	ENST00000533657	IFT57	Q9NWB7	429 aa		13.39	□□□□□ -0.27
CAPRIN1-215	ENST00000533657	RBM6	P78332	1123 aa	Known RBP	13.38	□□□□□ -0.27
CAPRIN1-215	ENST00000533657	SLFN5	Q08AF3	891 aa		13.38	□□□□□ -0.27
CAPRIN1-215	ENST00000533657	RTF1	Q92541	710 aa	Known RBP	13.38	□□□□□ -0.27
CAPRIN1-215	ENST00000533657	QTRT2	Q9H974	415 aa	Known RBP	13.38	□□□□□ -0.27

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