RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 USHBP1Q8N6Y0 703 aa17.14■□□□□ 0.33
CAPRIN1-213ENST00000533562 PPM1GO15355 546 aaPredicted RBP17.13■□□□□ 0.33
CAPRIN1-213ENST00000533562 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
CAPRIN1-213ENST00000533562 SLC27A3Q5K4L6 730 aa17.13■□□□□ 0.33
CAPRIN1-213ENST00000533562 PDGFDQ9GZP0 370 aaPredicted RBP17.13■□□□□ 0.33
CAPRIN1-213ENST00000533562 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
CAPRIN1-213ENST00000533562 HSPA5P11021 654 aaKnown RBP17.12■□□□□ 0.33
CAPRIN1-213ENST00000533562 EMILIN1Q9Y6C2 1016 aa17.12■□□□□ 0.33
CAPRIN1-213ENST00000533562 KIF20BQ96Q89 1820 aa17.12■□□□□ 0.33
CAPRIN1-213ENST00000533562 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
CAPRIN1-213ENST00000533562 MEGF6O75095 1541 aa17.11■□□□□ 0.33
CAPRIN1-213ENST00000533562 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
CAPRIN1-213ENST00000533562 BTAF1O14981 1849 aa17.1■□□□□ 0.33
CAPRIN1-213ENST00000533562 MTFR1LQ9H019 292 aa17.1■□□□□ 0.33
CAPRIN1-213ENST00000533562 LRRC4BQ9NT99 713 aa17.1■□□□□ 0.33
CAPRIN1-213ENST00000533562 MYOM1P52179 1685 aa17.1■□□□□ 0.33
CAPRIN1-213ENST00000533562 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
CAPRIN1-213ENST00000533562 PCDH11XQ9BZA7 1347 aa17.08■□□□□ 0.32
CAPRIN1-213ENST00000533562 PCDH11YQ9BZA8 1340 aa17.08■□□□□ 0.32
CAPRIN1-213ENST00000533562 CASZ1Q86V15 1759 aa17.07■□□□□ 0.32
CAPRIN1-213ENST00000533562 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
CAPRIN1-213ENST00000533562 PTGER2P43116 358 aa17.07■□□□□ 0.32
CAPRIN1-213ENST00000533562 PANK3Q9H999 370 aa17.07■□□□□ 0.32
CAPRIN1-213ENST00000533562 POLKQ9UBT6 870 aa17.07■□□□□ 0.32
CAPRIN1-213ENST00000533562 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
CAPRIN1-213ENST00000533562 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
CAPRIN1-213ENST00000533562 TNNT2P45379 298 aaPredicted RBP17.05■□□□□ 0.32
CAPRIN1-213ENST00000533562 TFCP2L1Q9NZI6 479 aa17.05■□□□□ 0.32
CAPRIN1-213ENST00000533562 SPG7Q9UQ90 795 aa17.05■□□□□ 0.32
CAPRIN1-213ENST00000533562 SLC16A10Q8TF71 515 aa17.04■□□□□ 0.32
CAPRIN1-213ENST00000533562 EYA1Q99502 592 aa17.04■□□□□ 0.32
CAPRIN1-213ENST00000533562 CCNL1Q9UK58 526 aaPredicted RBP17.04■□□□□ 0.32
CAPRIN1-213ENST00000533562 NSD2O96028 1365 aa17.03■□□□□ 0.32
CAPRIN1-213ENST00000533562 MAP2P11137 1827 aaKnown RBP17.03■□□□□ 0.32
CAPRIN1-213ENST00000533562 CYP27B1O15528 508 aa17.03■□□□□ 0.32
CAPRIN1-213ENST00000533562 KCNQ4P56696 695 aa17.03■□□□□ 0.32
CAPRIN1-213ENST00000533562 MPRIPQ6WCQ1 1025 aa17.02■□□□□ 0.32
CAPRIN1-213ENST00000533562 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.32
CAPRIN1-213ENST00000533562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.02■□□□□ 0.325e-13■□□□□ 9.9
CAPRIN1-213ENST00000533562 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
CAPRIN1-213ENST00000533562 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
CAPRIN1-213ENST00000533562 PAPPAQ13219 1627 aa17.01■□□□□ 0.31
CAPRIN1-213ENST00000533562 ARXQ96QS3 562 aa17.01■□□□□ 0.31
CAPRIN1-213ENST00000533562 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
CAPRIN1-213ENST00000533562 NKX1-1Q15270 411 aaPredicted RBP17■□□□□ 0.31
CAPRIN1-213ENST00000533562 MORC1Q86VD1 984 aa17■□□□□ 0.31
CAPRIN1-213ENST00000533562 SYT17Q9BSW7 474 aa17■□□□□ 0.31
CAPRIN1-213ENST00000533562 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
CAPRIN1-213ENST00000533562 UTRNP46939 3433 aa16.99■□□□□ 0.31
CAPRIN1-213ENST00000533562 NCAPD2Q15021 1401 aa16.99■□□□□ 0.31
CAPRIN1-213ENST00000533562 POLD1P28340 1107 aa16.99■□□□□ 0.31
CAPRIN1-213ENST00000533562 EIF4A2Q14240 407 aaKnown RBP16.99■□□□□ 0.31
CAPRIN1-213ENST00000533562 SMARCC1Q92922 1105 aaPredicted RBP16.99■□□□□ 0.31
CAPRIN1-213ENST00000533562 PNPLA7Q6ZV29 1317 aa16.98■□□□□ 0.31
CAPRIN1-213ENST00000533562 IFNL2Q8IZJ0 200 aa16.98■□□□□ 0.31
CAPRIN1-213ENST00000533562 ANKRD26Q9UPS8 1709 aa16.97■□□□□ 0.31
CAPRIN1-213ENST00000533562 YY1P25490 414 aa16.97■□□□□ 0.31
CAPRIN1-213ENST00000533562 LY75O60449 1722 aa16.96■□□□□ 0.31
CAPRIN1-213ENST00000533562 MSH5O43196 834 aa16.96■□□□□ 0.31
CAPRIN1-213ENST00000533562 PIGBQ92521 554 aa16.96■□□□□ 0.31
CAPRIN1-213ENST00000533562 PALLDQ8WX93 1383 aa16.96■□□□□ 0.31
CAPRIN1-213ENST00000533562 FLAD1Q8NFF5 587 aa16.95■□□□□ 0.3
CAPRIN1-213ENST00000533562 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
CAPRIN1-213ENST00000533562 PHKG2P15735 406 aa16.94■□□□□ 0.3
CAPRIN1-213ENST00000533562 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
CAPRIN1-213ENST00000533562 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
CAPRIN1-213ENST00000533562 COL23A1Q86Y22 540 aaPredicted RBP16.93■□□□□ 0.3
CAPRIN1-213ENST00000533562 IGSF1Q8N6C5 1336 aa16.93■□□□□ 0.3
CAPRIN1-213ENST00000533562 QSER1Q2KHR3 1735 aa16.93■□□□□ 0.3
CAPRIN1-213ENST00000533562 PKD1L3Q7Z443 1732 aa16.93■□□□□ 0.3
CAPRIN1-213ENST00000533562 MAP3K5Q99683 1374 aa16.92■□□□□ 0.3
CAPRIN1-213ENST00000533562 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
CAPRIN1-213ENST00000533562 KIF7Q2M1P5 1343 aa16.92■□□□□ 0.3
CAPRIN1-213ENST00000533562 ADRA2BP18089 450 aa16.91■□□□□ 0.3
CAPRIN1-213ENST00000533562 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
CAPRIN1-213ENST00000533562 GOLGB1Q14789 3259 aaKnown RBP16.91■□□□□ 0.3
CAPRIN1-213ENST00000533562 LOC102724428A0A0B4J2F2 783 aa16.9■□□□□ 0.3
CAPRIN1-213ENST00000533562 SIK1P57059 783 aa16.9■□□□□ 0.3
CAPRIN1-213ENST00000533562 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
CAPRIN1-213ENST00000533562 KLHL34Q8N239 644 aa16.9■□□□□ 0.3
CAPRIN1-213ENST00000533562 AK7Q96M32 723 aa16.9■□□□□ 0.3
CAPRIN1-213ENST00000533562 ITGB4P16144 1822 aa16.89■□□□□ 0.29
CAPRIN1-213ENST00000533562 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
CAPRIN1-213ENST00000533562 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
CAPRIN1-213ENST00000533562 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
CAPRIN1-213ENST00000533562 GPR162Q16538 588 aa16.87■□□□□ 0.29
CAPRIN1-213ENST00000533562 ZNF530Q6P9A1 599 aaPredicted RBP16.87■□□□□ 0.29
CAPRIN1-213ENST00000533562 ATG3Q9NT62 314 aa16.87■□□□□ 0.29
CAPRIN1-213ENST00000533562 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
CAPRIN1-213ENST00000533562 ATP6V1AP38606 617 aa16.86■□□□□ 0.29
CAPRIN1-213ENST00000533562 C1orf141Q5JVX7 400 aa16.86■□□□□ 0.29
CAPRIN1-213ENST00000533562 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
CAPRIN1-213ENST00000533562 TUBGCP6Q96RT7 1819 aa16.86■□□□□ 0.29
CAPRIN1-213ENST00000533562 C5P01031 1676 aa16.85■□□□□ 0.29
CAPRIN1-213ENST00000533562 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
CAPRIN1-213ENST00000533562 IL13P35225 146 aa16.85■□□□□ 0.29
CAPRIN1-213ENST00000533562 MTHFSP49914 203 aa16.85■□□□□ 0.29
CAPRIN1-213ENST00000533562 MSL1Q68DK7 614 aa16.85■□□□□ 0.29
CAPRIN1-213ENST00000533562 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
CAPRIN1-213ENST00000533562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms