RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 PLCH2O75038 1416 aa20.92■□□□□ 0.94
PHRF1-205ENST00000533464 TCEAL9Q9UHQ7 104 aa20.92■□□□□ 0.94
PHRF1-205ENST00000533464 CTDP1Q9Y5B0 961 aaPredicted RBP20.92■□□□□ 0.94
PHRF1-205ENST00000533464 STK38Q15208 465 aa20.91■□□□□ 0.94
PHRF1-205ENST00000533464 FMNL2Q96PY5 1086 aa20.91■□□□□ 0.94
PHRF1-205ENST00000533464 RALGAPBQ86X10 1494 aa20.91■□□□□ 0.94
PHRF1-205ENST00000533464 ZNF396Q96N95 335 aaPredicted RBP20.91■□□□□ 0.94
PHRF1-205ENST00000533464 PDRG1Q9NUG6 133 aa20.91■□□□□ 0.94
PHRF1-205ENST00000533464 MPHOSPH8Q99549 860 aa20.91■□□□□ 0.94
PHRF1-205ENST00000533464 SAMD1Q6SPF0 538 aaPredicted RBP20.9■□□□□ 0.94
PHRF1-205ENST00000533464 CCDC85AQ96PX6 553 aaPredicted RBP20.9■□□□□ 0.94
PHRF1-205ENST00000533464 PTCD1O75127 700 aaKnown RBP20.89■□□□□ 0.94
PHRF1-205ENST00000533464 MPRIPQ6WCQ1 1025 aa20.89■□□□□ 0.94
PHRF1-205ENST00000533464 GNL3LQ9NVN8 582 aaKnown RBP20.89■□□□□ 0.94
PHRF1-205ENST00000533464 KRT85P78386 507 aa20.89■□□□□ 0.93
PHRF1-205ENST00000533464 R3HCC1Q9Y3T6 440 aaKnown RBP20.89■□□□□ 0.93
PHRF1-205ENST00000533464 FAM83GA6ND36 823 aa20.89■□□□□ 0.93
PHRF1-205ENST00000533464 PPP6R1Q9UPN7 881 aa20.89■□□□□ 0.93
PHRF1-205ENST00000533464 NUTM2BA6NNL0 878 aaPredicted RBP20.89■□□□□ 0.93
PHRF1-205ENST00000533464 NUTM2EB1AL46 878 aaPredicted RBP20.89■□□□□ 0.93
PHRF1-205ENST00000533464 AMOTQ4VCS5 1084 aa20.89■□□□□ 0.93
PHRF1-205ENST00000533464 NUTM2AQ8IVF1 878 aaPredicted RBP20.89■□□□□ 0.93
PHRF1-205ENST00000533464 UPF3BQ9BZI7 483 aaKnown RBP20.89■□□□□ 0.93
PHRF1-205ENST00000533464 GLRX3O76003 335 aaKnown RBP20.88■□□□□ 0.93
PHRF1-205ENST00000533464 IGHDP01880 384 aa20.88■□□□□ 0.93
PHRF1-205ENST00000533464 PRAG1Q86YV5 1406 aa20.87■□□□□ 0.93
PHRF1-205ENST00000533464 LARP1Q6PKG0 1096 aaKnown RBP20.87■□□□□ 0.93
PHRF1-205ENST00000533464 MBIPQ9NS73 344 aa20.87■□□□□ 0.93
PHRF1-205ENST00000533464 RAB11FIP3O75154 756 aa20.87■□□□□ 0.93
PHRF1-205ENST00000533464 CCDC70Q6NSX1 233 aa20.87■□□□□ 0.93
PHRF1-205ENST00000533464 STK11IPQ8N1F8 1099 aa20.87■□□□□ 0.93
PHRF1-205ENST00000533464 NACAP1Q9BZK3 213 aa20.87■□□□□ 0.93
PHRF1-205ENST00000533464 CCDC173Q0VFZ6 552 aa20.87■□□□□ 0.93
PHRF1-205ENST00000533464 GRPEL1Q9HAV7 217 aa20.86■□□□□ 0.93
PHRF1-205ENST00000533464 LRRFIP2Q9Y608 721 aaKnown RBP20.86■□□□□ 0.93
PHRF1-205ENST00000533464 ZSCAN31Q96LW9 406 aaPredicted RBP20.86■□□□□ 0.93
PHRF1-205ENST00000533464 FLIIQ13045 1269 aa20.86■□□□□ 0.93
PHRF1-205ENST00000533464 ANKRD36BQ8N2N9 1353 aa20.86■□□□□ 0.93
PHRF1-205ENST00000533464 SLC3A2P08195 630 aaKnown RBP20.85■□□□□ 0.93
PHRF1-205ENST00000533464 ACEP12821 1306 aa20.85■□□□□ 0.93
PHRF1-205ENST00000533464 PDILTQ8N807 584 aa20.85■□□□□ 0.93
PHRF1-205ENST00000533464 ME1P48163 572 aa20.85■□□□□ 0.93
PHRF1-205ENST00000533464 DNAAF4Q8WXU2 420 aa20.85■□□□□ 0.93
PHRF1-205ENST00000533464 CASTP20810 708 aaKnown RBP20.85■□□□□ 0.93
PHRF1-205ENST00000533464 TTC21BQ7Z4L5 1316 aa20.84■□□□□ 0.93
PHRF1-205ENST00000533464 KRT32Q14532 448 aa20.84■□□□□ 0.93
PHRF1-205ENST00000533464 IL27Q8NEV9 243 aa20.84■□□□□ 0.93
PHRF1-205ENST00000533464 TESK2Q96S53 571 aa20.84■□□□□ 0.93
PHRF1-205ENST00000533464 CCDC192P0DO97 292 aa20.84■□□□□ 0.93
PHRF1-205ENST00000533464 ZSCAN25Q6NSZ9 544 aa20.84■□□□□ 0.93
PHRF1-205ENST00000533464 SYCP2Q9BX26 1530 aa20.84■□□□□ 0.93
PHRF1-205ENST00000533464 IL16Q14005 1332 aa20.83■□□□□ 0.93
PHRF1-205ENST00000533464 GPS2Q13227 327 aa20.83■□□□□ 0.93
PHRF1-205ENST00000533464 ANO8Q9HCE9 1232 aaPredicted RBP20.83■□□□□ 0.93
PHRF1-205ENST00000533464 PTPRCP08575 1304 aa20.83■□□□□ 0.93
PHRF1-205ENST00000533464 SMC2O95347 1197 aa20.83■□□□□ 0.93
PHRF1-205ENST00000533464 JMYQ8N9B5 988 aa20.83■□□□□ 0.93
PHRF1-205ENST00000533464 TNMDQ9H2S6 317 aa20.83■□□□□ 0.93
PHRF1-205ENST00000533464 BOLA2Q9H3K6 86 aa20.83■□□□□ 0.93
PHRF1-205ENST00000533464 DUOX2Q9NRD8 1548 aa20.83■□□□□ 0.92
PHRF1-205ENST00000533464 MYD88Q99836 296 aa20.83■□□□□ 0.92
PHRF1-205ENST00000533464 CTNNA3Q9UI47 895 aa20.83■□□□□ 0.92
PHRF1-205ENST00000533464 TRIM22Q8IYM9 498 aa20.82■□□□□ 0.92
PHRF1-205ENST00000533464 TNNT3P45378 269 aaPredicted RBP20.82■□□□□ 0.92
PHRF1-205ENST00000533464 BCL11BQ9C0K0 894 aaPredicted RBP20.82■□□□□ 0.92
PHRF1-205ENST00000533464 DBF4Q9UBU7 674 aaPredicted RBP20.82■□□□□ 0.92
PHRF1-205ENST00000533464 PARD3Q8TEW0 1356 aa20.82■□□□□ 0.92
PHRF1-205ENST00000533464 TBC1D2Q9BYX2 928 aa20.82■□□□□ 0.92
PHRF1-205ENST00000533464 MNS1Q8NEH6 495 aa20.82■□□□□ 0.92
PHRF1-205ENST00000533464 STARD3NLO95772 234 aa20.81■□□□□ 0.92
PHRF1-205ENST00000533464 TCOF1Q13428 1488 aaKnown RBP20.81■□□□□ 0.92
PHRF1-205ENST00000533464 MPNDQ8N594 471 aa20.81■□□□□ 0.92
PHRF1-205ENST00000533464 SPC24Q8NBT2 197 aa20.81■□□□□ 0.92
PHRF1-205ENST00000533464 NUP160Q12769 1436 aa20.81■□□□□ 0.92
PHRF1-205ENST00000533464 PRPF40BQ6NWY9 871 aaKnown RBP20.81■□□□□ 0.92
PHRF1-205ENST00000533464 CCDC43Q96MW1 224 aaKnown RBP20.81■□□□□ 0.92
PHRF1-205ENST00000533464 TRAPPC8Q9Y2L5 1435 aa20.81■□□□□ 0.92
PHRF1-205ENST00000533464 IDH1O75874 414 aaKnown RBP20.8■□□□□ 0.92
PHRF1-205ENST00000533464 IKQ13123 557 aaPredicted RBP20.8■□□□□ 0.92
PHRF1-205ENST00000533464 HSP90AB2PQ58FF8 381 aa20.8■□□□□ 0.92
PHRF1-205ENST00000533464 SPATA32Q96LK8 384 aa20.8■□□□□ 0.92
PHRF1-205ENST00000533464 NUP133Q8WUM0 1156 aa20.79■□□□□ 0.92
PHRF1-205ENST00000533464 SPINK5Q9NQ38 1064 aaPredicted RBP20.79■□□□□ 0.92
PHRF1-205ENST00000533464 ASXL1Q8IXJ9 1541 aa20.79■□□□□ 0.92
PHRF1-205ENST00000533464 CCDC69A6NI79 296 aa20.79■□□□□ 0.92
PHRF1-205ENST00000533464 ASXL2Q76L83 1435 aa20.79■□□□□ 0.92
PHRF1-205ENST00000533464 CCDC8Q9H0W5 538 aaPredicted RBP20.79■□□□□ 0.92
PHRF1-205ENST00000533464 BMP2KLQ5H9B9 411 aa20.78■□□□□ 0.92
PHRF1-205ENST00000533464 A2MP01023 1474 aa20.78■□□□□ 0.92
PHRF1-205ENST00000533464 DDX11Q96FC9 970 aa20.78■□□□□ 0.92
PHRF1-205ENST00000533464 PCDHB15Q9Y5E8 787 aa20.78■□□□□ 0.92
PHRF1-205ENST00000533464 FERMT3Q86UX7 667 aa20.77■□□□□ 0.92
PHRF1-205ENST00000533464 CCDC83Q8IWF9 413 aa20.77■□□□□ 0.92
PHRF1-205ENST00000533464 TDO2P48775 406 aa20.77■□□□□ 0.92
PHRF1-205ENST00000533464 METTL24Q5JXM2 366 aa20.77■□□□□ 0.92
PHRF1-205ENST00000533464 TBC1D9Q6ZT07 1266 aa20.77■□□□□ 0.91
PHRF1-205ENST00000533464 HYPKQ9NX55 129 aa20.77■□□□□ 0.91
PHRF1-205ENST00000533464 TMOD3Q9NYL9 352 aa20.77■□□□□ 0.91
PHRF1-205ENST00000533464 TXLNAP40222 546 aa20.76■□□□□ 0.91
PHRF1-205ENST00000533464 VSIG10Q8N0Z9 540 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms