RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CYP2E1P05181 493 aaPredicted RBP20.53■□□□□ 0.88
CTSB-228ENST00000533455 NUCB2P80303 420 aa20.53■□□□□ 0.88
CTSB-228ENST00000533455 TRIM44Q96DX7 344 aaPredicted RBP20.53■□□□□ 0.88
CTSB-228ENST00000533455 TECPR2O15040 1411 aa20.53■□□□□ 0.88
CTSB-228ENST00000533455 CCDC173Q0VFZ6 552 aa20.53■□□□□ 0.88
CTSB-228ENST00000533455 PPP1R9BQ96SB3 815 aa20.53■□□□□ 0.88
CTSB-228ENST00000533455 TSPOAP1O95153 1857 aa20.52■□□□□ 0.88
CTSB-228ENST00000533455 CEP85Q6P2H3 762 aa20.52■□□□□ 0.88
CTSB-228ENST00000533455 RGPD1P0DJD0 1748 aa20.52■□□□□ 0.88
CTSB-228ENST00000533455 NUDT16Q96DE0 195 aaKnown RBP20.51■□□□□ 0.87
CTSB-228ENST00000533455 RTL1A6NKG5 1358 aa20.51■□□□□ 0.87
CTSB-228ENST00000533455 PTPRCP08575 1304 aa20.51■□□□□ 0.87
CTSB-228ENST00000533455 DCTN1Q14203 1278 aa20.51■□□□□ 0.87
CTSB-228ENST00000533455 RRS1Q15050 365 aaKnown RBP20.51■□□□□ 0.87
CTSB-228ENST00000533455 SIRT1Q96EB6 747 aa20.51■□□□□ 0.87
CTSB-228ENST00000533455 MSH6P52701 1360 aa20.5■□□□□ 0.87
CTSB-228ENST00000533455 NALCNQ8IZF0 1738 aa20.5■□□□□ 0.87
CTSB-228ENST00000533455 CHL1O00533 1208 aa20.49■□□□□ 0.87
CTSB-228ENST00000533455 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
CTSB-228ENST00000533455 CCDC61Q9Y6R9 512 aa20.49■□□□□ 0.87
CTSB-228ENST00000533455 DDX49Q9Y6V7 483 aaKnown RBP20.49■□□□□ 0.87
CTSB-228ENST00000533455 ZNF445P59923 1031 aa20.49■□□□□ 0.87
CTSB-228ENST00000533455 CWC22Q9HCG8 908 aaKnown RBP20.49■□□□□ 0.87
CTSB-228ENST00000533455 CASC1Q6TDU7 716 aa20.48■□□□□ 0.87
CTSB-228ENST00000533455 METP08581 1390 aa20.48■□□□□ 0.87
CTSB-228ENST00000533455 SDSP20132 328 aa20.48■□□□□ 0.87
CTSB-228ENST00000533455 NASPP49321 788 aaPredicted RBP20.48■□□□□ 0.87
CTSB-228ENST00000533455 TOPAZ1Q8N9V7 1692 aa20.47■□□□□ 0.87
CTSB-228ENST00000533455 TUBGCP6Q96RT7 1819 aa20.47■□□□□ 0.87
CTSB-228ENST00000533455 OTUD7AQ8TE49 926 aaPredicted RBP20.47■□□□□ 0.87
CTSB-228ENST00000533455 EIF4A2Q14240 407 aaKnown RBP20.46■□□□□ 0.87
CTSB-228ENST00000533455 PEAK1Q9H792 1746 aa20.45■□□□□ 0.86
CTSB-228ENST00000533455 ST18O60284 1047 aa20.45■□□□□ 0.86
CTSB-228ENST00000533455 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.45■□□□□ 0.86
CTSB-228ENST00000533455 LMBRD1Q9NUN5 540 aa20.45■□□□□ 0.86
CTSB-228ENST00000533455 OVOS2A0A0J9YW53 1432 aa20.44■□□□□ 0.86
CTSB-228ENST00000533455 REC8O95072 547 aa20.44■□□□□ 0.86
CTSB-228ENST00000533455 OVOS2Q6IE36 1432 aa20.44■□□□□ 0.86
CTSB-228ENST00000533455 AEBP1Q8IUX7 1158 aa20.44■□□□□ 0.86
CTSB-228ENST00000533455 CRB1P82279 1406 aa20.44■□□□□ 0.86
CTSB-228ENST00000533455 MCTP1Q6DN14 999 aa20.44■□□□□ 0.86
CTSB-228ENST00000533455 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
CTSB-228ENST00000533455 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
CTSB-228ENST00000533455 OSBPL3Q9H4L5 887 aa20.43■□□□□ 0.86
CTSB-228ENST00000533455 NCKAP5LQ9HCH0 1330 aa20.43■□□□□ 0.86
CTSB-228ENST00000533455 ANP32BQ92688 251 aaKnown RBP20.43■□□□□ 0.86
CTSB-228ENST00000533455 MEIS3Q99687 375 aa20.43■□□□□ 0.86
CTSB-228ENST00000533455 PRR36Q9H6K5 1346 aa20.42■□□□□ 0.86
CTSB-228ENST00000533455 SMARCA5O60264 1052 aaPredicted RBP20.42■□□□□ 0.86
CTSB-228ENST00000533455 TXNDC2Q86VQ3 553 aa20.42■□□□□ 0.86
CTSB-228ENST00000533455 HMMRO75330 724 aa20.41■□□□□ 0.86
CTSB-228ENST00000533455 FMN2Q9NZ56 1722 aa20.41■□□□□ 0.86
CTSB-228ENST00000533455 ERC2O15083 957 aa20.41■□□□□ 0.86
CTSB-228ENST00000533455 ZSCAN23Q3MJ62 389 aa20.41■□□□□ 0.86
CTSB-228ENST00000533455 ZSCAN30Q86W11 494 aa20.41■□□□□ 0.86
CTSB-228ENST00000533455 PKP1Q13835 747 aa20.39■□□□□ 0.86
CTSB-228ENST00000533455 TTC21BQ7Z4L5 1316 aa20.39■□□□□ 0.85
CTSB-228ENST00000533455 MCM10Q7L590 875 aa20.39■□□□□ 0.85
CTSB-228ENST00000533455 N4BP2Q86UW6 1770 aaPredicted RBP20.38■□□□□ 0.85
CTSB-228ENST00000533455 RRP9O43818 475 aaKnown RBP20.38■□□□□ 0.85
CTSB-228ENST00000533455 HS1BP3Q53T59 392 aa20.38■□□□□ 0.85
CTSB-228ENST00000533455 CAVIN1Q6NZI2 390 aaKnown RBP20.38■□□□□ 0.85
CTSB-228ENST00000533455 KIF13AQ9H1H9 1805 aa20.38■□□□□ 0.85
CTSB-228ENST00000533455 TPM2P07951 284 aa20.37■□□□□ 0.85
CTSB-228ENST00000533455 ZGPATQ8N5A5 531 aaKnown RBP20.37■□□□□ 0.85
CTSB-228ENST00000533455 ZDHHC9Q9Y397 364 aa20.37■□□□□ 0.85
CTSB-228ENST00000533455 ARHGEF10O15013 1369 aa20.37■□□□□ 0.85
CTSB-228ENST00000533455 USP31Q70CQ4 1352 aa20.37■□□□□ 0.85
CTSB-228ENST00000533455 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.37■□□□□ 0.85
CTSB-228ENST00000533455 CCT4P50991 539 aaKnown RBP20.36■□□□□ 0.85
CTSB-228ENST00000533455 SALL3Q9BXA9 1300 aa20.36■□□□□ 0.85
CTSB-228ENST00000533455 PDE1AP54750 535 aa20.36■□□□□ 0.85
CTSB-228ENST00000533455 FAM208AQ9UK61 1670 aaKnown RBP20.35■□□□□ 0.85
CTSB-228ENST00000533455 SLC4A2P04920 1241 aa20.35■□□□□ 0.85
CTSB-228ENST00000533455 PDLIM2Q96JY6 352 aa20.35■□□□□ 0.85
CTSB-228ENST00000533455 LRRC37A3O60309 1634 aa20.35■□□□□ 0.85
CTSB-228ENST00000533455 XRN1Q8IZH2 1706 aaKnown RBP20.35■□□□□ 0.85
CTSB-228ENST00000533455 APBB1O00213 710 aa20.34■□□□□ 0.85
CTSB-228ENST00000533455 GPT2Q8TD30 523 aa20.34■□□□□ 0.85
CTSB-228ENST00000533455 USP6P35125 1406 aa20.34■□□□□ 0.85
CTSB-228ENST00000533455 NCLP19338 710 aaKnown RBP20.34■□□□□ 0.85
CTSB-228ENST00000533455 CACNA1FO60840 1977 aa20.33■□□□□ 0.85
CTSB-228ENST00000533455 MCM2P49736 904 aa20.33■□□□□ 0.85
CTSB-228ENST00000533455 RBSNQ9H1K0 784 aa20.33■□□□□ 0.85
CTSB-228ENST00000533455 RIMS1Q86UR5 1692 aaKnown RBP20.33■□□□□ 0.85
CTSB-228ENST00000533455 PLEKHG3A1L390 1219 aa20.32■□□□□ 0.84
CTSB-228ENST00000533455 PRPF40AO75400 957 aaKnown RBP20.32■□□□□ 0.84
CTSB-228ENST00000533455 HSP90AA2PQ14568 343 aaPredicted RBP20.32■□□□□ 0.84
CTSB-228ENST00000533455 ROBO2Q9HCK4 1378 aa20.32■□□□□ 0.84
CTSB-228ENST00000533455 OFD1O75665 1012 aa20.32■□□□□ 0.84
CTSB-228ENST00000533455 HDGFP51858 240 aaKnown RBP20.32■□□□□ 0.84
CTSB-228ENST00000533455 SSH2Q76I76 1423 aa20.31■□□□□ 0.84
CTSB-228ENST00000533455 UBR1Q8IWV7 1749 aa20.31■□□□□ 0.84
CTSB-228ENST00000533455 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
CTSB-228ENST00000533455 IL17RAQ96F46 866 aa20.31■□□□□ 0.84
CTSB-228ENST00000533455 ACEP12821 1306 aa20.31■□□□□ 0.84
CTSB-228ENST00000533455 GNAI2P04899 355 aa20.31■□□□□ 0.84
CTSB-228ENST00000533455 MSNP26038 577 aaKnown RBP20.31■□□□□ 0.84
CTSB-228ENST00000533455 G2E3Q7L622 706 aa20.31■□□□□ 0.84
CTSB-228ENST00000533455 KDRP35968 1356 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms