RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 MCM4P33991 863 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 FOSBP53539 338 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 MICALL1Q8N3F8 863 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 CHMP4CQ96CF2 233 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 AIMP1Q12904 312 aaKnown RBP8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 TRIM5Q9C035 493 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 KDM5BQ9UGL1 1544 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 AP1ARQ63HQ0 302 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 RSPH14Q9UHP6 348 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 DUOX2Q9NRD8 1548 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 G3BP1Q13283 466 aaKnown RBP eCLIP8.24□□□□□ -1.097e-7■□□□□ 9.5
TGFBR3-210ENST00000533089 NUP133Q8WUM0 1156 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 DNAJC5Q9H3Z4 198 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 NUCB2P80303 420 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 RUFY2Q8WXA3 655 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 CNTLNQ9NXG0 1405 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 SYCP2Q9BX26 1530 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 ITSN2Q9NZM3 1697 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 IKQ13123 557 aaPredicted RBP8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 SF3B2Q13435 895 aaKnown RBP8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 BACH2Q9BYV9 841 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 TRAPPC8Q9Y2L5 1435 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 FKBP5Q13451 457 aaPredicted RBP8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 ESCO1Q5FWF5 840 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 CLASRPQ8N2M8 674 aaKnown RBP8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 SAMD9Q5K651 1589 aa8.24□□□□□ -1.09
TGFBR3-210ENST00000533089 MAP2K2P36507 400 aa8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 RNF187Q5TA31 235 aaPredicted RBP8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 CCAR1Q8IX12 1150 aaKnown RBP8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 SHANK2Q9UPX8 1470 aa8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 DIAPH1O60610 1272 aaKnown RBP8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 DMTNQ08495 405 aa8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 ZKSCAN2Q63HK3 967 aa8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 MICALCLQ6ZW33 695 aa8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 ERLIN1O75477 346 aa8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 RIC3Q7Z5B4 369 aa8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 NEUROD6Q96NK8 337 aa8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 PRPF40AO75400 957 aaKnown RBP8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 ATP6V1DQ9Y5K8 247 aa8.23□□□□□ -1.09
TGFBR3-210ENST00000533089 ZKSCAN1P17029 563 aaPredicted RBP8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 NAA25Q14CX7 972 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 WDR66Q8TBY9 1149 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 PRIMPOLQ96LW4 560 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 TCOF1Q13428 1488 aaKnown RBP8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 TSPYL4Q9UJ04 414 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 MYBBP1AQ9BQG0 1328 aaKnown RBP8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 CCDC97Q96F63 343 aaPredicted RBP8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 FBXO31Q5XUX0 539 aaPredicted RBP8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 CAGE1Q8TC20 777 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 PRAM1Q96QH2 718 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 LRRCC1Q9C099 1032 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 NUTM2BA6NNL0 878 aaPredicted RBP8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 NUTM2EB1AL46 878 aaPredicted RBP8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 RIPK4P57078 832 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 TMEM132AQ24JP5 1023 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 WASHC4Q2M389 1173 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 NUTM2AQ8IVF1 878 aaPredicted RBP8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 CABP2Q9NPB3 220 aa8.22□□□□□ -1.09
TGFBR3-210ENST00000533089 UBXN4Q92575 508 aa8.21□□□□□ -1.09
TGFBR3-210ENST00000533089 PANK2Q9BZ23 570 aa8.21□□□□□ -1.09
TGFBR3-210ENST00000533089 ZBED9Q6R2W3 1325 aa8.21□□□□□ -1.09
TGFBR3-210ENST00000533089 IVLP07476 585 aa8.21□□□□□ -1.09
TGFBR3-210ENST00000533089 PPP2R5AQ15172 486 aa8.21□□□□□ -1.09
TGFBR3-210ENST00000533089 C22orf23Q9BZE7 217 aa8.21□□□□□ -1.09
TGFBR3-210ENST00000533089 ATP10AO60312 1499 aa8.21□□□□□ -1.1
TGFBR3-210ENST00000533089 IPO7O95373 1038 aaKnown RBP8.21□□□□□ -1.1
TGFBR3-210ENST00000533089 HMOX1P09601 288 aa8.21□□□□□ -1.1
TGFBR3-210ENST00000533089 BMS1Q14692 1282 aaKnown RBP8.21□□□□□ -1.1
TGFBR3-210ENST00000533089 STRN4Q9NRL3 753 aa8.21□□□□□ -1.1
TGFBR3-210ENST00000533089 XRCC6P12956 609 aaKnown RBP eCLIP8.21□□□□□ -1.1
TGFBR3-210ENST00000533089 PDE3BQ13370 1112 aa8.21□□□□□ -1.1
TGFBR3-210ENST00000533089 CEP57Q86XR8 500 aa8.21□□□□□ -1.1
TGFBR3-210ENST00000533089 RBM42Q9BTD8 480 aaKnown RBP8.21□□□□□ -1.1
TGFBR3-210ENST00000533089 SWAP70Q9UH65 585 aa8.21□□□□□ -1.1
TGFBR3-210ENST00000533089 OFD1O75665 1012 aa8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 IDI1Q13907 227 aa8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 OGFRQ9NZT2 677 aa8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 COG6Q9Y2V7 657 aa8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 KRBA2Q6ZNG9 492 aa8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 ODF2Q5BJF6 829 aa8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 WASHC2AQ641Q2 1341 aa8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 ATP6V1AP38606 617 aa8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 PIP4K2BP78356 416 aa8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 RNF168Q8IYW5 571 aaPredicted RBP8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 ZNF692Q9BU19 519 aaPredicted RBP8.2□□□□□ -1.1
TGFBR3-210ENST00000533089 FAM135AQ9P2D6 1515 aa8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 BICD2Q8TD16 824 aa8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 LRRFIP2Q9Y608 721 aaKnown RBP8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 HOOK1Q9UJC3 728 aaKnown RBP8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 A0A1B0GUA9 196 aa8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 EZRP15311 586 aaKnown RBP8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 UTP14CQ5TAP6 766 aaKnown RBP8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 ATAD2Q6PL18 1390 aa8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 MBD3O95983 291 aa8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 ZFYVE27Q5T4F4 411 aa8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 ABCA8O94911 1581 aa8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 APAF1O14727 1248 aa8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 RABEP1Q15276 862 aa8.19□□□□□ -1.1
TGFBR3-210ENST00000533089 MYCNP04198 464 aaPredicted RBP8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 NLRP6P59044 892 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms