RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 PLEKHG5O94827 1062 aa18.54■□□□□ 0.56
SSH3-210ENST00000532881 RBM33Q96EV2 1170 aaKnown RBP18.54■□□□□ 0.56
SSH3-210ENST00000532881 DDIT3P35638 169 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 CEP85Q6P2H3 762 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 PEAK1Q9H792 1746 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 HDGFP51858 240 aaKnown RBP18.53■□□□□ 0.56
SSH3-210ENST00000532881 INTS3Q68E01 1043 aaKnown RBP18.53■□□□□ 0.56
SSH3-210ENST00000532881 LTV1Q96GA3 475 aaPredicted RBP18.53■□□□□ 0.56
SSH3-210ENST00000532881 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 PTPRUQ92729 1446 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 REREQ9P2R6 1566 aa18.52■□□□□ 0.56
SSH3-210ENST00000532881 ITSN1Q15811 1721 aa18.52■□□□□ 0.56
SSH3-210ENST00000532881 TSPYL4Q9UJ04 414 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 AKAP12Q02952 1782 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 TECPR2O15040 1411 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 CDC45O75419 566 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 ANKRD44Q8N8A2 993 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 NGDNQ8NEJ9 315 aaKnown RBP18.51■□□□□ 0.55
SSH3-210ENST00000532881 USP6P35125 1406 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 SNX21Q969T3 373 aa18.5■□□□□ 0.55
SSH3-210ENST00000532881 OVOS2A0A0J9YW53 1432 aa18.5■□□□□ 0.55
SSH3-210ENST00000532881 OVOS2Q6IE36 1432 aa18.5■□□□□ 0.55
SSH3-210ENST00000532881 TTC22Q5TAA0 569 aa18.5■□□□□ 0.55
SSH3-210ENST00000532881 EYA1Q99502 592 aa18.5■□□□□ 0.55
SSH3-210ENST00000532881 CHMP4BQ9H444 224 aaKnown RBP18.5■□□□□ 0.55
SSH3-210ENST00000532881 GOLGA6L3A6NEY3 463 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 RTL1A6NKG5 1358 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 PLEKHG3A1L390 1219 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 SDSP20132 328 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 SSFA2P28290 1259 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 AMPHP49418 695 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 SIRT1Q96EB6 747 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 RRAGDQ9NQL2 400 aaPredicted RBP18.48■□□□□ 0.55
SSH3-210ENST00000532881 NCOA3Q9Y6Q9 1424 aa18.48■□□□□ 0.55
SSH3-210ENST00000532881 K7ELQ4 463 aaPredicted RBP18.48■□□□□ 0.55
SSH3-210ENST00000532881 USHBP1Q8N6Y0 703 aa18.48■□□□□ 0.55
SSH3-210ENST00000532881 EXOC6BQ9Y2D4 811 aa18.48■□□□□ 0.55
SSH3-210ENST00000532881 CRB1P82279 1406 aa18.48■□□□□ 0.55
SSH3-210ENST00000532881 AK9Q5TCS8 1911 aa18.47■□□□□ 0.55
SSH3-210ENST00000532881 RTF1Q92541 710 aaKnown RBP18.47■□□□□ 0.55
SSH3-210ENST00000532881 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
SSH3-210ENST00000532881 NLRP6P59044 892 aa18.46■□□□□ 0.55
SSH3-210ENST00000532881 PKP1Q13835 747 aa18.46■□□□□ 0.55
SSH3-210ENST00000532881 CHAMP1Q96JM3 812 aa18.46■□□□□ 0.55
SSH3-210ENST00000532881 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
SSH3-210ENST00000532881 FSD2A1L4K1 749 aa18.45■□□□□ 0.54
SSH3-210ENST00000532881 RAB3GAP1Q15042 981 aa18.44■□□□□ 0.54
SSH3-210ENST00000532881 GAS2L3Q86XJ1 694 aa18.44■□□□□ 0.54
SSH3-210ENST00000532881 CEP170BQ9Y4F5 1589 aaPredicted RBP18.44■□□□□ 0.54
SSH3-210ENST00000532881 USP26Q9BXU7 913 aa18.44■□□□□ 0.54
SSH3-210ENST00000532881 RPAP2Q8IXW5 612 aaPredicted RBP18.43■□□□□ 0.54
SSH3-210ENST00000532881 RGPD8O14715 1765 aaPredicted RBP18.43■□□□□ 0.54
SSH3-210ENST00000532881 ZBTB7CA1YPR0 619 aa18.43■□□□□ 0.54
SSH3-210ENST00000532881 L1TD1Q5T7N2 865 aaKnown RBP18.43■□□□□ 0.54
SSH3-210ENST00000532881 NRKQ7Z2Y5 1582 aa18.43■□□□□ 0.54
SSH3-210ENST00000532881 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
SSH3-210ENST00000532881 KIF13AQ9H1H9 1805 aa18.41■□□□□ 0.54
SSH3-210ENST00000532881 FKBP5Q13451 457 aaPredicted RBP18.41■□□□□ 0.54
SSH3-210ENST00000532881 EID1Q9Y6B2 187 aa18.41■□□□□ 0.54
SSH3-210ENST00000532881 USP31Q70CQ4 1352 aa18.41■□□□□ 0.54
SSH3-210ENST00000532881 ZGPATQ8N5A5 531 aaKnown RBP18.4■□□□□ 0.54
SSH3-210ENST00000532881 KIAA0232Q92628 1395 aa18.4■□□□□ 0.54
SSH3-210ENST00000532881 PLEKHG1Q9ULL1 1385 aa18.4■□□□□ 0.54
SSH3-210ENST00000532881 PTPRCP08575 1304 aa18.4■□□□□ 0.54
SSH3-210ENST00000532881 DDX11L8A8MPP1 907 aa18.4■□□□□ 0.54
SSH3-210ENST00000532881 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
SSH3-210ENST00000532881 FOXD4L5Q5VV16 416 aaPredicted RBP18.39■□□□□ 0.54
SSH3-210ENST00000532881 FOXD4L4Q8WXT5 416 aaPredicted RBP18.39■□□□□ 0.54
SSH3-210ENST00000532881 KCNA6P17658 529 aa18.39■□□□□ 0.53
SSH3-210ENST00000532881 FAM43AQ8N2R8 423 aa18.39■□□□□ 0.53
SSH3-210ENST00000532881 IL17REQ8NFR9 667 aa18.39■□□□□ 0.53
SSH3-210ENST00000532881 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
SSH3-210ENST00000532881 FLT4P35916 1363 aa18.38■□□□□ 0.53
SSH3-210ENST00000532881 EIF5BO60841 1220 aaKnown RBP18.37■□□□□ 0.53
SSH3-210ENST00000532881 FLIIQ13045 1269 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 ABTB2Q8N961 1025 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
SSH3-210ENST00000532881 GRPEL1Q9HAV7 217 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 KIF24Q5T7B8 1368 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 PDE1AP54750 535 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 RGPD1P0DJD0 1748 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 TOPAZ1Q8N9V7 1692 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 SBNO1A3KN83 1393 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 HOXC9P31274 260 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 SETD1BQ9UPS6 1966 aaKnown RBP18.35■□□□□ 0.53
SSH3-210ENST00000532881 ARHGEF10O15013 1369 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 ANXA1P04083 346 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
SSH3-210ENST00000532881 IL1RAPL2Q9NP60 686 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 LRRFIP2Q9Y608 721 aaKnown RBP18.35■□□□□ 0.53
SSH3-210ENST00000532881 MAP4K4O95819 1239 aaPredicted RBP18.35■□□□□ 0.53
SSH3-210ENST00000532881 MCTP1Q6DN14 999 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 UNC5CLQ8IV45 518 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 RILPL2Q969X0 211 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 CIZ1Q9ULV3 898 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms