RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 NSD2O96028 1365 aa23.88■■□□□ 1.41
RPUSD4-207ENST00000532800 ZCRB1Q8TBF4 217 aaKnown RBP23.87■■□□□ 1.41
RPUSD4-207ENST00000532800 TUBGCP6Q96RT7 1819 aa23.87■■□□□ 1.41
RPUSD4-207ENST00000532800 PRIM1P49642 420 aaKnown RBP23.86■■□□□ 1.41
RPUSD4-207ENST00000532800 LY75O60449 1722 aa23.86■■□□□ 1.41
RPUSD4-207ENST00000532800 QSER1Q2KHR3 1735 aa23.85■■□□□ 1.41
RPUSD4-207ENST00000532800 DCAF8L1A6NGE4 600 aa23.85■■□□□ 1.41
RPUSD4-207ENST00000532800 KCNQ4P56696 695 aa23.85■■□□□ 1.41
RPUSD4-207ENST00000532800 FHDC1Q9C0D6 1143 aaPredicted RBP23.85■■□□□ 1.41
RPUSD4-207ENST00000532800 SMG6Q86US8 1419 aaKnown RBP23.84■■□□□ 1.41
RPUSD4-207ENST00000532800 CDCA8Q53HL2 280 aa23.84■■□□□ 1.41
RPUSD4-207ENST00000532800 AKT1S1Q96B36 256 aa23.84■■□□□ 1.41
RPUSD4-207ENST00000532800 CARD14Q9BXL6 1004 aa23.84■■□□□ 1.41
RPUSD4-207ENST00000532800 NSD3Q9BZ95 1437 aa23.84■■□□□ 1.41
RPUSD4-207ENST00000532800 HSP90AB2PQ58FF8 381 aa23.83■■□□□ 1.41
RPUSD4-207ENST00000532800 SLC27A3Q5K4L6 730 aa23.83■■□□□ 1.41
RPUSD4-207ENST00000532800 INSRP06213 1382 aa23.82■■□□□ 1.4
RPUSD4-207ENST00000532800 FLT4P35916 1363 aa23.81■■□□□ 1.4
RPUSD4-207ENST00000532800 SYT17Q9BSW7 474 aa23.81■■□□□ 1.4
RPUSD4-207ENST00000532800 RAPGEF4Q8WZA2 1011 aa23.8■■□□□ 1.4
RPUSD4-207ENST00000532800 ARXQ96QS3 562 aa23.79■■□□□ 1.4
RPUSD4-207ENST00000532800 PNPLA7Q6ZV29 1317 aa23.79■■□□□ 1.4
RPUSD4-207ENST00000532800 UTRNP46939 3433 aa23.78■■□□□ 1.4
RPUSD4-207ENST00000532800 EMILIN1Q9Y6C2 1016 aa23.78■■□□□ 1.4
RPUSD4-207ENST00000532800 CGNL1Q0VF96 1302 aa23.78■■□□□ 1.4
RPUSD4-207ENST00000532800 KIF24Q5T7B8 1368 aa23.78■■□□□ 1.4
RPUSD4-207ENST00000532800 COL24A1Q17RW2 1714 aa23.77■■□□□ 1.4
RPUSD4-207ENST00000532800 ANKRD26Q9UPS8 1709 aa23.77■■□□□ 1.4
RPUSD4-207ENST00000532800 TATP17735 454 aaPredicted RBP23.77■■□□□ 1.4
RPUSD4-207ENST00000532800 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
RPUSD4-207ENST00000532800 TIMELESSQ9UNS1 1208 aa23.75■■□□□ 1.39
RPUSD4-207ENST00000532800 TOGARAM1Q9Y4F4 1720 aa23.75■■□□□ 1.39
RPUSD4-207ENST00000532800 TFCP2L1Q9NZI6 479 aa23.74■■□□□ 1.39
RPUSD4-207ENST00000532800 CCNL1Q9UK58 526 aaPredicted RBP23.74■■□□□ 1.39
RPUSD4-207ENST00000532800 PKD1L3Q7Z443 1732 aa23.73■■□□□ 1.39
RPUSD4-207ENST00000532800 PCDH11XQ9BZA7 1347 aa23.73■■□□□ 1.39
RPUSD4-207ENST00000532800 PCDH11YQ9BZA8 1340 aa23.73■■□□□ 1.39
RPUSD4-207ENST00000532800 MAP3K5Q99683 1374 aa23.73■■□□□ 1.39
RPUSD4-207ENST00000532800 SLC16A10Q8TF71 515 aa23.72■■□□□ 1.39
RPUSD4-207ENST00000532800 MAP2P11137 1827 aaKnown RBP23.72■■□□□ 1.39
RPUSD4-207ENST00000532800 C5P01031 1676 aa23.71■■□□□ 1.39
RPUSD4-207ENST00000532800 NCAPD2Q15021 1401 aa23.71■■□□□ 1.39
RPUSD4-207ENST00000532800 CLSPNQ9HAW4 1339 aa23.71■■□□□ 1.39
RPUSD4-207ENST00000532800 PPM1GO15355 546 aaPredicted RBP23.71■■□□□ 1.39
RPUSD4-207ENST00000532800 ITGB4P16144 1822 aa23.7■■□□□ 1.39
RPUSD4-207ENST00000532800 CYP27B1O15528 508 aa23.7■■□□□ 1.38
RPUSD4-207ENST00000532800 POLR3GLQ9BT43 218 aa23.69■■□□□ 1.38
RPUSD4-207ENST00000532800 TAF1LQ8IZX4 1826 aa23.68■■□□□ 1.38
RPUSD4-207ENST00000532800 KLHL34Q8N239 644 aa23.68■■□□□ 1.38
RPUSD4-207ENST00000532800 CHD4Q14839 1912 aa23.67■■□□□ 1.38
RPUSD4-207ENST00000532800 POLD1P28340 1107 aa23.67■■□□□ 1.38
RPUSD4-207ENST00000532800 PALLDQ8WX93 1383 aa23.66■■□□□ 1.38
RPUSD4-207ENST00000532800 MPRIPQ6WCQ1 1025 aa23.66■■□□□ 1.38
RPUSD4-207ENST00000532800 WASHC2AQ641Q2 1341 aa23.65■■□□□ 1.38
RPUSD4-207ENST00000532800 COL23A1Q86Y22 540 aaPredicted RBP23.65■■□□□ 1.38
RPUSD4-207ENST00000532800 MSH5O43196 834 aa23.63■■□□□ 1.37
RPUSD4-207ENST00000532800 EYA1Q99502 592 aa23.63■■□□□ 1.37
RPUSD4-207ENST00000532800 POLKQ9UBT6 870 aa23.63■■□□□ 1.37
RPUSD4-207ENST00000532800 GOLGB1Q14789 3259 aaKnown RBP23.62■■□□□ 1.37
RPUSD4-207ENST00000532800 TNNT2P45379 298 aaPredicted RBP23.61■■□□□ 1.37
RPUSD4-207ENST00000532800 ZNF784Q8NCA9 323 aaPredicted RBP23.61■■□□□ 1.37
RPUSD4-207ENST00000532800 NLGN2Q8NFZ4 835 aa23.61■■□□□ 1.37
RPUSD4-207ENST00000532800 C4BP0C0L5 1744 aa23.61■■□□□ 1.37
RPUSD4-207ENST00000532800 HSPA5P11021 654 aaKnown RBP23.6■■□□□ 1.37
RPUSD4-207ENST00000532800 MSL1Q68DK7 614 aa23.6■■□□□ 1.37
RPUSD4-207ENST00000532800 GPR162Q16538 588 aa23.59■■□□□ 1.37
RPUSD4-207ENST00000532800 PIGBQ92521 554 aa23.59■■□□□ 1.37
RPUSD4-207ENST00000532800 SPG7Q9UQ90 795 aa23.59■■□□□ 1.37
RPUSD4-207ENST00000532800 NKX1-1Q15270 411 aaPredicted RBP23.58■■□□□ 1.37
RPUSD4-207ENST00000532800 EIF4G2P78344 907 aaKnown RBP eCLIP23.57■■□□□ 1.36
RPUSD4-207ENST00000532800 EIF4A2Q14240 407 aaKnown RBP23.57■■□□□ 1.36
RPUSD4-207ENST00000532800 UBR3Q6ZT12 1888 aa23.56■■□□□ 1.36
RPUSD4-207ENST00000532800 AMIGO3Q86WK7 504 aa23.56■■□□□ 1.36
RPUSD4-207ENST00000532800 PELP1Q8IZL8 1130 aaKnown RBP23.56■■□□□ 1.36
RPUSD4-207ENST00000532800 SMARCC1Q92922 1105 aaPredicted RBP23.56■■□□□ 1.36
RPUSD4-207ENST00000532800 PANK3Q9H999 370 aa23.55■■□□□ 1.36
RPUSD4-207ENST00000532800 SMIM5Q71RC9 77 aa23.54■■□□□ 1.36
RPUSD4-207ENST00000532800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.54■■□□□ 1.36
RPUSD4-207ENST00000532800 PHKG2P15735 406 aa23.53■■□□□ 1.36
RPUSD4-207ENST00000532800 AK7Q96M32 723 aa23.52■■□□□ 1.36
RPUSD4-207ENST00000532800 TMOD3Q9NYL9 352 aa23.52■■□□□ 1.36
RPUSD4-207ENST00000532800 IFNL2Q8IZJ0 200 aa23.51■■□□□ 1.35
RPUSD4-207ENST00000532800 FLAD1Q8NFF5 587 aa23.51■■□□□ 1.35
RPUSD4-207ENST00000532800 ASAP1Q9ULH1 1129 aa23.51■■□□□ 1.35
RPUSD4-207ENST00000532800 IGSF1Q8N6C5 1336 aa23.51■■□□□ 1.35
RPUSD4-207ENST00000532800 LOC102724428A0A0B4J2F2 783 aa23.5■■□□□ 1.35
RPUSD4-207ENST00000532800 PHF14O94880 888 aa23.5■■□□□ 1.35
RPUSD4-207ENST00000532800 SIK1P57059 783 aa23.5■■□□□ 1.35
RPUSD4-207ENST00000532800 LINC00116Q8NCU8 138 aa23.5■■□□□ 1.35
RPUSD4-207ENST00000532800 CCER1Q8TC90 406 aaPredicted RBP23.5■■□□□ 1.35
RPUSD4-207ENST00000532800 YBX3P16989 372 aaKnown RBP eCLIP23.49■■□□□ 1.35
RPUSD4-207ENST00000532800 HMGB2P26583 209 aaKnown RBP23.48■■□□□ 1.35
RPUSD4-207ENST00000532800 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.47■■□□□ 1.35
RPUSD4-207ENST00000532800 ITPK1Q13572 414 aa23.47■■□□□ 1.35
RPUSD4-207ENST00000532800 PLEKHG2Q9H7P9 1386 aa23.46■■□□□ 1.35
RPUSD4-207ENST00000532800 ATG3Q9NT62 314 aa23.46■■□□□ 1.35
RPUSD4-207ENST00000532800 SSFA2P28290 1259 aa23.43■■□□□ 1.34
RPUSD4-207ENST00000532800 ATP6V1AP38606 617 aa23.43■■□□□ 1.34
RPUSD4-207ENST00000532800 MORC1Q86VD1 984 aa23.43■■□□□ 1.34
RPUSD4-207ENST00000532800 KDM6AO15550 1401 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms