RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TATP17735 454 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-220ENST00000532375 PPP2R1AP30153 589 aa18.9■□□□□ 0.62
TSPAN4-220ENST00000532375 DDX54Q8TDD1 881 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-220ENST00000532375 PKD1L3Q7Z443 1732 aa18.9■□□□□ 0.62
TSPAN4-220ENST00000532375 KCNQ2O43526 872 aa18.89■□□□□ 0.61
TSPAN4-220ENST00000532375 EN1Q05925 392 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-220ENST00000532375 CAMKK2Q96RR4 588 aa18.89■□□□□ 0.61
TSPAN4-220ENST00000532375 BCL11BQ9C0K0 894 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-220ENST00000532375 PARD3Q8TEW0 1356 aa18.89■□□□□ 0.61
TSPAN4-220ENST00000532375 CYP27B1O15528 508 aa18.88■□□□□ 0.61
TSPAN4-220ENST00000532375 SF3B2Q13435 895 aaKnown RBP18.88■□□□□ 0.61
TSPAN4-220ENST00000532375 AEBP1Q8IUX7 1158 aa18.88■□□□□ 0.61
TSPAN4-220ENST00000532375 KDRP35968 1356 aa18.88■□□□□ 0.61
TSPAN4-220ENST00000532375 KAT6BQ8WYB5 2073 aa18.88■□□□□ 0.61
TSPAN4-220ENST00000532375 BAG6P46379 1132 aa18.87■□□□□ 0.61
TSPAN4-220ENST00000532375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.87■□□□□ 0.61
TSPAN4-220ENST00000532375 NHSQ6T4R5 1651 aa18.86■□□□□ 0.61
TSPAN4-220ENST00000532375 APBA3O96018 575 aa18.86■□□□□ 0.61
TSPAN4-220ENST00000532375 PLEKHG2Q9H7P9 1386 aa18.85■□□□□ 0.61
TSPAN4-220ENST00000532375 DIAPH1O60610 1272 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-220ENST00000532375 EZH2Q15910 746 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-220ENST00000532375 ACSBG1Q96GR2 724 aa18.85■□□□□ 0.61
TSPAN4-220ENST00000532375 PLSCR1O15162 318 aa18.84■□□□□ 0.61
TSPAN4-220ENST00000532375 SULT6B1Q6IMI4 303 aa18.84■□□□□ 0.61
TSPAN4-220ENST00000532375 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.6
TSPAN4-220ENST00000532375 NKX1-1Q15270 411 aaPredicted RBP18.83■□□□□ 0.6
TSPAN4-220ENST00000532375 PCDH11XQ9BZA7 1347 aa18.82■□□□□ 0.6
TSPAN4-220ENST00000532375 PCDH11YQ9BZA8 1340 aa18.82■□□□□ 0.6
TSPAN4-220ENST00000532375 PROM2Q8N271 834 aa18.82■□□□□ 0.6
TSPAN4-220ENST00000532375 BTAF1O14981 1849 aa18.81■□□□□ 0.6
TSPAN4-220ENST00000532375 DOT1LQ8TEK3 1739 aa18.81■□□□□ 0.6
TSPAN4-220ENST00000532375 SPG7Q9UQ90 795 aa18.81■□□□□ 0.6
TSPAN4-220ENST00000532375 RREB1Q92766 1687 aa18.81■□□□□ 0.6
TSPAN4-220ENST00000532375 RGPD3A6NKT7 1758 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-220ENST00000532375 RGPD4Q7Z3J3 1758 aa18.81■□□□□ 0.6
TSPAN4-220ENST00000532375 TOGARAM1Q9Y4F4 1720 aa18.8■□□□□ 0.6
TSPAN4-220ENST00000532375 PHKG2P15735 406 aa18.8■□□□□ 0.6
TSPAN4-220ENST00000532375 PRIM1P49642 420 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-220ENST00000532375 HMOX1P09601 288 aa18.79■□□□□ 0.6
TSPAN4-220ENST00000532375 RALBP1Q15311 655 aa18.79■□□□□ 0.6
TSPAN4-220ENST00000532375 ITGB4P16144 1822 aa18.78■□□□□ 0.6
TSPAN4-220ENST00000532375 NUP188Q5SRE5 1749 aa18.77■□□□□ 0.6
TSPAN4-220ENST00000532375 PLEKHO1Q53GL0 409 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-220ENST00000532375 IFNL2Q8IZJ0 200 aa18.77■□□□□ 0.6
TSPAN4-220ENST00000532375 AMOTQ4VCS5 1084 aa18.76■□□□□ 0.59
TSPAN4-220ENST00000532375 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
TSPAN4-220ENST00000532375 U2SURPO15042 1029 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-220ENST00000532375 TXNRD1Q16881 649 aa18.74■□□□□ 0.59
TSPAN4-220ENST00000532375 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-220ENST00000532375 ZNF530Q6P9A1 599 aaPredicted RBP18.73■□□□□ 0.59
TSPAN4-220ENST00000532375 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
TSPAN4-220ENST00000532375 MTHFSDQ2M296 383 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-220ENST00000532375 SYTL4Q96C24 671 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-220ENST00000532375 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-220ENST00000532375 LY75O60449 1722 aa18.71■□□□□ 0.59
TSPAN4-220ENST00000532375 PIGBQ92521 554 aa18.71■□□□□ 0.59
TSPAN4-220ENST00000532375 LRRC4BQ9NT99 713 aa18.71■□□□□ 0.59
TSPAN4-220ENST00000532375 DCAF5Q96JK2 942 aa18.7■□□□□ 0.58
TSPAN4-220ENST00000532375 PHACTR3Q96KR7 559 aa18.7■□□□□ 0.58
TSPAN4-220ENST00000532375 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
TSPAN4-220ENST00000532375 MYBBP1AQ9BQG0 1328 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-220ENST00000532375 MPRIPQ6WCQ1 1025 aa18.69■□□□□ 0.58
TSPAN4-220ENST00000532375 SCN11AQ9UI33 1791 aa18.68■□□□□ 0.58
TSPAN4-220ENST00000532375 ERVV-2B6SEH9 535 aa18.68■□□□□ 0.58
TSPAN4-220ENST00000532375 FCHSD2O94868 740 aa18.68■□□□□ 0.58
TSPAN4-220ENST00000532375 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-220ENST00000532375 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
TSPAN4-220ENST00000532375 AKAP4Q5JQC9 854 aa18.68■□□□□ 0.58
TSPAN4-220ENST00000532375 ANO8Q9HCE9 1232 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-220ENST00000532375 ADAMTS7Q9UKP4 1686 aa18.68■□□□□ 0.58
TSPAN4-220ENST00000532375 VIRMAQ69YN4 1812 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-220ENST00000532375 HSP90AB1P08238 724 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-220ENST00000532375 PRKAR2BP31323 418 aa18.67■□□□□ 0.58
TSPAN4-220ENST00000532375 PAPPAQ13219 1627 aa18.67■□□□□ 0.58
TSPAN4-220ENST00000532375 LGR6Q9HBX8 967 aa18.66■□□□□ 0.58
TSPAN4-220ENST00000532375 PSDA5PKW4 1024 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-220ENST00000532375 KCNQ4P56696 695 aa18.65■□□□□ 0.58
TSPAN4-220ENST00000532375 R3HDM1Q15032 1099 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-220ENST00000532375 C1orf141Q5JVX7 400 aa18.65■□□□□ 0.58
TSPAN4-220ENST00000532375 SLC27A3Q5K4L6 730 aa18.64■□□□□ 0.57
TSPAN4-220ENST00000532375 PLEKHF1Q96S99 279 aa18.64■□□□□ 0.57
TSPAN4-220ENST00000532375 ATG3Q9NT62 314 aa18.64■□□□□ 0.57
TSPAN4-220ENST00000532375 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.57
TSPAN4-220ENST00000532375 ASAP1Q9ULH1 1129 aa18.64■□□□□ 0.57
TSPAN4-220ENST00000532375 RNMTO43148 476 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-220ENST00000532375 NBPF14Q5TI25 921 aa18.62■□□□□ 0.57
TSPAN4-220ENST00000532375 NFATC2IPQ8NCF5 419 aa18.62■□□□□ 0.57
TSPAN4-220ENST00000532375 IL17REQ8NFR9 667 aa18.62■□□□□ 0.57
TSPAN4-220ENST00000532375 PALLDQ8WX93 1383 aa18.62■□□□□ 0.57
TSPAN4-220ENST00000532375 TAF1LQ8IZX4 1826 aa18.61■□□□□ 0.57
TSPAN4-220ENST00000532375 GAS2L2Q8NHY3 880 aa18.61■□□□□ 0.57
TSPAN4-220ENST00000532375 SMARCC1Q92922 1105 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-220ENST00000532375 MRC1P22897 1456 aa18.6■□□□□ 0.57
TSPAN4-220ENST00000532375 CABP4P57796 275 aa18.6■□□□□ 0.57
TSPAN4-220ENST00000532375 SLC15A2Q16348 729 aa18.6■□□□□ 0.57
TSPAN4-220ENST00000532375 ZNF827Q17R98 1081 aa18.6■□□□□ 0.57
TSPAN4-220ENST00000532375 AKT1S1Q96B36 256 aa18.6■□□□□ 0.57
TSPAN4-220ENST00000532375 CCDC184Q52MB2 194 aa18.59■□□□□ 0.57
TSPAN4-220ENST00000532375 SLC4A9Q96Q91 983 aa18.59■□□□□ 0.57
TSPAN4-220ENST00000532375 SLC52A2Q9HAB3 445 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms