RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 MYT1Q01538 1121 aa12.54□□□□□ -0.4
SRPRA-207ENST00000532268 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
SRPRA-207ENST00000532268 ATRNO75882 1429 aa12.54□□□□□ -0.4
SRPRA-207ENST00000532268 IL2RBP14784 551 aa12.53□□□□□ -0.4
SRPRA-207ENST00000532268 TMPOP42166 694 aaKnown RBP12.53□□□□□ -0.4
SRPRA-207ENST00000532268 NFE2L2Q16236 605 aa12.53□□□□□ -0.4
SRPRA-207ENST00000532268 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
SRPRA-207ENST00000532268 GAS2L2Q8NHY3 880 aa12.53□□□□□ -0.4
SRPRA-207ENST00000532268 GJD4Q96KN9 370 aaPredicted RBP12.53□□□□□ -0.4
SRPRA-207ENST00000532268 EP400Q96L91 3159 aa12.53□□□□□ -0.4
SRPRA-207ENST00000532268 VPS72Q15906 364 aa12.52□□□□□ -0.41
SRPRA-207ENST00000532268 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.41
SRPRA-207ENST00000532268 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
SRPRA-207ENST00000532268 C1orf141Q5JVX7 400 aa12.52□□□□□ -0.41
SRPRA-207ENST00000532268 SPG7Q9UQ90 795 aa12.52□□□□□ -0.41
SRPRA-207ENST00000532268 LMOD3Q0VAK6 560 aa12.51□□□□□ -0.41
SRPRA-207ENST00000532268 SPATA31A1Q5TZJ5 1347 aa12.51□□□□□ -0.41
SRPRA-207ENST00000532268 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
SRPRA-207ENST00000532268 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
SRPRA-207ENST00000532268 NRAPQ86VF7 1730 aa12.51□□□□□ -0.41
SRPRA-207ENST00000532268 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
SRPRA-207ENST00000532268 RTF1Q92541 710 aaKnown RBP12.5□□□□□ -0.41
SRPRA-207ENST00000532268 ZBED9Q6R2W3 1325 aa12.5□□□□□ -0.41
SRPRA-207ENST00000532268 MEGF6O75095 1541 aa12.5□□□□□ -0.41
SRPRA-207ENST00000532268 NCAPD2Q15021 1401 aa12.49□□□□□ -0.41
SRPRA-207ENST00000532268 FAM98CQ17RN3 349 aaKnown RBP12.49□□□□□ -0.41
SRPRA-207ENST00000532268 ZCRB1Q8TBF4 217 aaKnown RBP12.49□□□□□ -0.41
SRPRA-207ENST00000532268 DDX54Q8TDD1 881 aaKnown RBP12.49□□□□□ -0.41
SRPRA-207ENST00000532268 THRAP3Q9Y2W1 955 aaKnown RBP12.49□□□□□ -0.41
SRPRA-207ENST00000532268 GNAT3A8MTJ3 354 aa12.48□□□□□ -0.41
SRPRA-207ENST00000532268 ONECUT3O60422 494 aaPredicted RBP12.48□□□□□ -0.41
SRPRA-207ENST00000532268 CDCA7Q9BWT1 371 aaPredicted RBP12.48□□□□□ -0.41
SRPRA-207ENST00000532268 OVOS2A0A0G2JMS6 1433 aa12.47□□□□□ -0.41
SRPRA-207ENST00000532268 EXOC5O00471 708 aa12.47□□□□□ -0.41
SRPRA-207ENST00000532268 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
SRPRA-207ENST00000532268 LAS1LQ9Y4W2 734 aaKnown RBP12.47□□□□□ -0.41
SRPRA-207ENST00000532268 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
SRPRA-207ENST00000532268 PARP4Q9UKK3 1724 aaKnown RBP12.46□□□□□ -0.41
SRPRA-207ENST00000532268 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.41
SRPRA-207ENST00000532268 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.41
SRPRA-207ENST00000532268 CENPBP07199 599 aaPredicted RBP12.46□□□□□ -0.41
SRPRA-207ENST00000532268 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.41
SRPRA-207ENST00000532268 DCTN1Q14203 1278 aa12.46□□□□□ -0.41
SRPRA-207ENST00000532268 DDB1Q16531 1140 aa12.46□□□□□ -0.41
SRPRA-207ENST00000532268 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
SRPRA-207ENST00000532268 MCM10Q7L590 875 aa12.46□□□□□ -0.41
SRPRA-207ENST00000532268 POTEDQ86YR6 584 aa12.46□□□□□ -0.41
SRPRA-207ENST00000532268 IFNL2Q8IZJ0 200 aa12.46□□□□□ -0.41
SRPRA-207ENST00000532268 THUMPD2Q9BTF0 503 aaKnown RBP12.46□□□□□ -0.41
SRPRA-207ENST00000532268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.41
SRPRA-207ENST00000532268 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.41
SRPRA-207ENST00000532268 GLI3P10071 1580 aa12.46□□□□□ -0.42
SRPRA-207ENST00000532268 RGS12O14924 1447 aa12.45□□□□□ -0.42
SRPRA-207ENST00000532268 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
SRPRA-207ENST00000532268 CCDC27Q2M243 656 aa12.45□□□□□ -0.42
SRPRA-207ENST00000532268 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
SRPRA-207ENST00000532268 BARGINQ6ZT62 677 aa12.45□□□□□ -0.42
SRPRA-207ENST00000532268 BRWD3Q6RI45 1802 aa12.44□□□□□ -0.42
SRPRA-207ENST00000532268 HSP90AB1P08238 724 aaKnown RBP12.44□□□□□ -0.42
SRPRA-207ENST00000532268 PHKG2P15735 406 aa12.44□□□□□ -0.42
SRPRA-207ENST00000532268 SEPT12Q8IYM1 358 aa12.44□□□□□ -0.42
SRPRA-207ENST00000532268 DISP2A7MBM2 1401 aa12.44□□□□□ -0.42
SRPRA-207ENST00000532268 CYP27B1O15528 508 aa12.43□□□□□ -0.42
SRPRA-207ENST00000532268 HTATSF1O43719 755 aaKnown RBP12.43□□□□□ -0.42
SRPRA-207ENST00000532268 TEFQ10587 303 aa12.43□□□□□ -0.42
SRPRA-207ENST00000532268 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
SRPRA-207ENST00000532268 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
SRPRA-207ENST00000532268 WDR63Q8IWG1 891 aa12.43□□□□□ -0.42
SRPRA-207ENST00000532268 PLEKHG2Q9H7P9 1386 aa12.43□□□□□ -0.42
SRPRA-207ENST00000532268 RNMTO43148 476 aaKnown RBP12.42□□□□□ -0.42
SRPRA-207ENST00000532268 UPF1Q92900 1129 aaKnown RBP eCLIP12.42□□□□□ -0.42
SRPRA-207ENST00000532268 CDCA7LQ96GN5 454 aa12.42□□□□□ -0.42
SRPRA-207ENST00000532268 E9PSI1 815 aa12.41□□□□□ -0.42
SRPRA-207ENST00000532268 TNS2Q63HR2 1409 aa12.41□□□□□ -0.42
SRPRA-207ENST00000532268 PKD1L3Q7Z443 1732 aa12.41□□□□□ -0.42
SRPRA-207ENST00000532268 MYH16Q9H6N6 1097 aa12.41□□□□□ -0.42
SRPRA-207ENST00000532268 LGR6Q9HBX8 967 aa12.41□□□□□ -0.42
SRPRA-207ENST00000532268 DLG5Q8TDM6 1919 aa12.41□□□□□ -0.42
SRPRA-207ENST00000532268 ZNF521Q96K83 1311 aa12.4□□□□□ -0.42
SRPRA-207ENST00000532268 WNK3Q9BYP7 1800 aa12.4□□□□□ -0.42
SRPRA-207ENST00000532268 GNAI1P63096 354 aa12.4□□□□□ -0.42
SRPRA-207ENST00000532268 IL17REQ8NFR9 667 aa12.4□□□□□ -0.42
SRPRA-207ENST00000532268 DCAF5Q96JK2 942 aa12.4□□□□□ -0.42
SRPRA-207ENST00000532268 CABP4P57796 275 aa12.39□□□□□ -0.43
SRPRA-207ENST00000532268 SLFN5Q08AF3 891 aa12.39□□□□□ -0.43
SRPRA-207ENST00000532268 KRT27Q7Z3Y8 459 aa12.39□□□□□ -0.43
SRPRA-207ENST00000532268 IFT57Q9NWB7 429 aa12.39□□□□□ -0.43
SRPRA-207ENST00000532268 IL16Q14005 1332 aa12.38□□□□□ -0.43
SRPRA-207ENST00000532268 TSR2Q969E8 191 aaKnown RBP12.38□□□□□ -0.43
SRPRA-207ENST00000532268 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
SRPRA-207ENST00000532268 MIS18AQ9NYP9 233 aa12.38□□□□□ -0.43
SRPRA-207ENST00000532268 TSPYL4Q9UJ04 414 aa12.38□□□□□ -0.43
SRPRA-207ENST00000532268 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
SRPRA-207ENST00000532268 TAF7Q15545 349 aaPredicted RBP12.37□□□□□ -0.43
SRPRA-207ENST00000532268 CCDC125Q86Z20 511 aa12.37□□□□□ -0.43
SRPRA-207ENST00000532268 MARCH10Q8NA82 808 aaPredicted RBP12.37□□□□□ -0.43
SRPRA-207ENST00000532268 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
SRPRA-207ENST00000532268 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
SRPRA-207ENST00000532268 KAT6BQ8WYB5 2073 aa12.37□□□□□ -0.43
SRPRA-207ENST00000532268 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms