RNA–Protein interactions for RNA: ENST00000531653.5

PSMC3-211, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 498 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-211ENST00000531653 JMYQ8N9B5 988 aa16.38■□□□□ 0.21
PSMC3-211ENST00000531653 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
PSMC3-211ENST00000531653 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
PSMC3-211ENST00000531653 TOMM70O94826 608 aa16.36■□□□□ 0.21
PSMC3-211ENST00000531653 PCNTO95613 3336 aa16.35■□□□□ 0.21
PSMC3-211ENST00000531653 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
PSMC3-211ENST00000531653 MSL1Q68DK7 614 aa16.35■□□□□ 0.21
PSMC3-211ENST00000531653 TOGARAM1Q9Y4F4 1720 aa16.35■□□□□ 0.21
PSMC3-211ENST00000531653 PRELPP51888 382 aa16.34■□□□□ 0.21
PSMC3-211ENST00000531653 ANKRD24Q8TF21 1146 aa16.34■□□□□ 0.21
PSMC3-211ENST00000531653 CCNL1Q9UK58 526 aaPredicted RBP16.34■□□□□ 0.21
PSMC3-211ENST00000531653 EVC2Q86UK5 1308 aa16.33■□□□□ 0.2
PSMC3-211ENST00000531653 IGSF1Q8N6C5 1336 aa16.33■□□□□ 0.2
PSMC3-211ENST00000531653 KTN1Q86UP2 1357 aaKnown RBP16.32■□□□□ 0.2
PSMC3-211ENST00000531653 DDX54Q8TDD1 881 aaKnown RBP16.32■□□□□ 0.2
PSMC3-211ENST00000531653 KIAA1551Q9HCM1 1747 aa16.32■□□□□ 0.2
PSMC3-211ENST00000531653 UBR3Q6ZT12 1888 aa16.31■□□□□ 0.2
PSMC3-211ENST00000531653 KLRG1Q96E93 195 aa16.31■□□□□ 0.2
PSMC3-211ENST00000531653 KIF13BQ9NQT8 1826 aa16.31■□□□□ 0.2
PSMC3-211ENST00000531653 CD163L1Q9NR16 1453 aa16.3■□□□□ 0.2
PSMC3-211ENST00000531653 FLAD1Q8NFF5 587 aa16.3■□□□□ 0.2
PSMC3-211ENST00000531653 SBNO2Q9Y2G9 1366 aa16.29■□□□□ 0.2
PSMC3-211ENST00000531653 MSH5O43196 834 aa16.29■□□□□ 0.2
PSMC3-211ENST00000531653 SYTL4Q96C24 671 aaPredicted RBP16.28■□□□□ 0.2
PSMC3-211ENST00000531653 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
PSMC3-211ENST00000531653 USP47Q96K76 1375 aa16.27■□□□□ 0.2
PSMC3-211ENST00000531653 TNS4Q8IZW8 715 aa16.27■□□□□ 0.2
PSMC3-211ENST00000531653 RBM46Q8TBY0 533 aaKnown RBP16.27■□□□□ 0.2
PSMC3-211ENST00000531653 RGPD2P0DJD1 1756 aa16.27■□□□□ 0.2
PSMC3-211ENST00000531653 MEGF6O75095 1541 aa16.26■□□□□ 0.19
PSMC3-211ENST00000531653 AMIGO3Q86WK7 504 aa16.26■□□□□ 0.19
PSMC3-211ENST00000531653 IP6K1Q92551 441 aa16.26■□□□□ 0.19
PSMC3-211ENST00000531653 CAPN15O75808 1086 aa16.25■□□□□ 0.19
PSMC3-211ENST00000531653 NME9Q86XW9 330 aa16.25■□□□□ 0.19
PSMC3-211ENST00000531653 NMRK2Q9NPI5 230 aa16.25■□□□□ 0.19
PSMC3-211ENST00000531653 BRCA1P38398 1863 aaKnown RBP16.25■□□□□ 0.19
PSMC3-211ENST00000531653 HMGB2P26583 209 aaKnown RBP16.24■□□□□ 0.19
PSMC3-211ENST00000531653 ZCRB1Q8TBF4 217 aaKnown RBP16.24■□□□□ 0.19
PSMC3-211ENST00000531653 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
PSMC3-211ENST00000531653 PXDNLA1KZ92 1463 aa16.23■□□□□ 0.19
PSMC3-211ENST00000531653 SLC34A2O95436 690 aa16.23■□□□□ 0.19
PSMC3-211ENST00000531653 HTRA3P83110 453 aa16.23■□□□□ 0.19
PSMC3-211ENST00000531653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.23■□□□□ 0.19
PSMC3-211ENST00000531653 C10orf71Q711Q0 1435 aa16.22■□□□□ 0.19
PSMC3-211ENST00000531653 FSTL1Q12841 308 aa16.22■□□□□ 0.19
PSMC3-211ENST00000531653 WWC3Q9ULE0 1092 aa16.22■□□□□ 0.19
PSMC3-211ENST00000531653 N4BP2Q86UW6 1770 aaPredicted RBP16.21■□□□□ 0.19
PSMC3-211ENST00000531653 PALLDQ8WX93 1383 aa16.21■□□□□ 0.19
PSMC3-211ENST00000531653 EDC4Q6P2E9 1401 aaKnown RBP16.2■□□□□ 0.18
PSMC3-211ENST00000531653 ITGB4P16144 1822 aa16.2■□□□□ 0.18
PSMC3-211ENST00000531653 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
PSMC3-211ENST00000531653 PKD1L3Q7Z443 1732 aa16.19■□□□□ 0.18
PSMC3-211ENST00000531653 ARFGEF1Q9Y6D6 1849 aa16.19■□□□□ 0.18
PSMC3-211ENST00000531653 SSFA2P28290 1259 aa16.18■□□□□ 0.18
PSMC3-211ENST00000531653 CGNL1Q0VF96 1302 aa16.18■□□□□ 0.18
PSMC3-211ENST00000531653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.17■□□□□ 0.18
PSMC3-211ENST00000531653 PLEKHG2Q9H7P9 1386 aa16.16■□□□□ 0.18
PSMC3-211ENST00000531653 TNRC6CQ9HCJ0 1690 aaKnown RBP16.16■□□□□ 0.18
PSMC3-211ENST00000531653 TGFB2P61812 414 aa16.16■□□□□ 0.18
PSMC3-211ENST00000531653 HOXC9P31274 260 aa16.15■□□□□ 0.18
PSMC3-211ENST00000531653 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
PSMC3-211ENST00000531653 LTV1Q96GA3 475 aaPredicted RBP16.15■□□□□ 0.18
PSMC3-211ENST00000531653 MAP3K19Q56UN5 1328 aa16.15■□□□□ 0.18
PSMC3-211ENST00000531653 AK7Q96M32 723 aa16.14■□□□□ 0.17
PSMC3-211ENST00000531653 SBF1O95248 1867 aa16.13■□□□□ 0.17
PSMC3-211ENST00000531653 A0A1W2PP64 1363 aa16.13■□□□□ 0.17
PSMC3-211ENST00000531653 NBPF6Q5VWK0 638 aa16.12■□□□□ 0.17
PSMC3-211ENST00000531653 SMARCC1Q92922 1105 aaPredicted RBP16.12■□□□□ 0.17
PSMC3-211ENST00000531653 NBPF4Q96M43 638 aa16.12■□□□□ 0.17
PSMC3-211ENST00000531653 KCPQ6ZWJ8 1503 aa16.12■□□□□ 0.17
PSMC3-211ENST00000531653 PHF14O94880 888 aa16.11■□□□□ 0.17
PSMC3-211ENST00000531653 HSPA1AP0DMV8 641 aaKnown RBP16.11■□□□□ 0.17
PSMC3-211ENST00000531653 HSPA1BP0DMV9 641 aaKnown RBP16.11■□□□□ 0.17
PSMC3-211ENST00000531653 BCS1LQ9Y276 419 aa16.11■□□□□ 0.17
PSMC3-211ENST00000531653 RTL1A6NKG5 1358 aa16.11■□□□□ 0.17
PSMC3-211ENST00000531653 MMP10P09238 476 aa16.1■□□□□ 0.17
PSMC3-211ENST00000531653 C9orf131Q5VYM1 1079 aa16.1■□□□□ 0.17
PSMC3-211ENST00000531653 LINC00116Q8NCU8 138 aa16.1■□□□□ 0.17
PSMC3-211ENST00000531653 SLC12A5Q9H2X9 1139 aa16.1■□□□□ 0.17
PSMC3-211ENST00000531653 PCDH11XQ9BZA7 1347 aa16.1■□□□□ 0.17
PSMC3-211ENST00000531653 PCDH11YQ9BZA8 1340 aa16.1■□□□□ 0.17
PSMC3-211ENST00000531653 C4AP0C0L4 1744 aa16.09■□□□□ 0.17
PSMC3-211ENST00000531653 A0A0G2JLW4 131 aa16.09■□□□□ 0.17
PSMC3-211ENST00000531653 CYP27B1O15528 508 aa16.09■□□□□ 0.17
PSMC3-211ENST00000531653 KCNA3P22001 575 aa16.09■□□□□ 0.17
PSMC3-211ENST00000531653 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
PSMC3-211ENST00000531653 ARHGAP27Q6ZUM4 889 aa16.09■□□□□ 0.17
PSMC3-211ENST00000531653 HDGFL2Q7Z4V5 671 aaPredicted RBP16.09■□□□□ 0.17
PSMC3-211ENST00000531653 C16orf71Q8IYS4 520 aaPredicted RBP16.09■□□□□ 0.17
PSMC3-211ENST00000531653 L3MBTL2Q969R5 705 aa16.09■□□□□ 0.17
PSMC3-211ENST00000531653 KDM2BQ8NHM5 1336 aa16.08■□□□□ 0.16
PSMC3-211ENST00000531653 SMC1BQ8NDV3 1235 aa16.07■□□□□ 0.16
PSMC3-211ENST00000531653 PIGBQ92521 554 aa16.07■□□□□ 0.16
PSMC3-211ENST00000531653 ROCK2O75116 1388 aaKnown RBP16.07■□□□□ 0.16
PSMC3-211ENST00000531653 ZNF831Q5JPB2 1677 aa16.06■□□□□ 0.16
PSMC3-211ENST00000531653 LOC102724428A0A0B4J2F2 783 aa16.06■□□□□ 0.16
PSMC3-211ENST00000531653 DPEP1P16444 411 aa16.06■□□□□ 0.16
PSMC3-211ENST00000531653 FBLN1P23142 703 aa16.06■□□□□ 0.16
PSMC3-211ENST00000531653 AMPHP49418 695 aa16.06■□□□□ 0.16
PSMC3-211ENST00000531653 SIK1P57059 783 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms