RNA–Protein interactions for RNA: ENST00000530979.1

CAVIN3-203, Transcript of caveolae associated protein 3, humanhuman

TSL 2 BASIC

Gene CAVIN3, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-203ENST00000530979 COG3Q96JB2 828 aa27.78■■■□□ 2.04
CAVIN3-203ENST00000530979 PELP1Q8IZL8 1130 aaKnown RBP27.77■■■□□ 2.04
CAVIN3-203ENST00000530979 MAP3K19Q56UN5 1328 aa27.75■■■□□ 2.03
CAVIN3-203ENST00000530979 GIGYF1O75420 1035 aaPredicted RBP27.75■■■□□ 2.03
CAVIN3-203ENST00000530979 HOXC9P31274 260 aa27.75■■■□□ 2.03
CAVIN3-203ENST00000530979 AMPHP49418 695 aa27.75■■■□□ 2.03
CAVIN3-203ENST00000530979 ZCRB1Q8TBF4 217 aaKnown RBP27.75■■■□□ 2.03
CAVIN3-203ENST00000530979 NSD2O96028 1365 aa27.74■■■□□ 2.03
CAVIN3-203ENST00000530979 SHANK3Q9BYB0 1731 aa27.74■■■□□ 2.03
CAVIN3-203ENST00000530979 SLC24A1O60721 1099 aa27.73■■■□□ 2.03
CAVIN3-203ENST00000530979 CCNL1Q9UK58 526 aaPredicted RBP27.73■■■□□ 2.03
CAVIN3-203ENST00000530979 RTL1A6NKG5 1358 aa27.73■■■□□ 2.03
CAVIN3-203ENST00000530979 KCNQ4P56696 695 aa27.72■■■□□ 2.03
CAVIN3-203ENST00000530979 TONSLQ96HA7 1378 aa27.72■■■□□ 2.03
CAVIN3-203ENST00000530979 USP47Q96K76 1375 aa27.72■■■□□ 2.03
CAVIN3-203ENST00000530979 HMGB2P26583 209 aaKnown RBP27.71■■■□□ 2.03
CAVIN3-203ENST00000530979 MEGF6O75095 1541 aa27.71■■■□□ 2.03
CAVIN3-203ENST00000530979 RGPD2P0DJD1 1756 aa27.71■■■□□ 2.03
CAVIN3-203ENST00000530979 CGNL1Q0VF96 1302 aa27.7■■■□□ 2.03
CAVIN3-203ENST00000530979 GRIN3BO60391 1043 aa27.7■■■□□ 2.02
CAVIN3-203ENST00000530979 NLGN2Q8NFZ4 835 aa27.7■■■□□ 2.02
CAVIN3-203ENST00000530979 SMG6Q86US8 1419 aaKnown RBP27.68■■■□□ 2.02
CAVIN3-203ENST00000530979 MSH5O43196 834 aa27.68■■■□□ 2.02
CAVIN3-203ENST00000530979 GOLGB1Q14789 3259 aaKnown RBP27.65■■■□□ 2.02
CAVIN3-203ENST00000530979 RAPGEF4Q8WZA2 1011 aa27.65■■■□□ 2.02
CAVIN3-203ENST00000530979 TESK2Q96S53 571 aa27.64■■■□□ 2.02
CAVIN3-203ENST00000530979 C5P01031 1676 aa27.64■■■□□ 2.02
CAVIN3-203ENST00000530979 COL23A1Q86Y22 540 aaPredicted RBP27.63■■■□□ 2.01
CAVIN3-203ENST00000530979 YBX3P16989 372 aaKnown RBP eCLIP27.61■■■□□ 2.01
CAVIN3-203ENST00000530979 FBLN1P23142 703 aa27.61■■■□□ 2.01
CAVIN3-203ENST00000530979 NBPF6Q5VWK0 638 aa27.61■■■□□ 2.01
CAVIN3-203ENST00000530979 FLAD1Q8NFF5 587 aa27.61■■■□□ 2.01
CAVIN3-203ENST00000530979 NBPF4Q96M43 638 aa27.61■■■□□ 2.01
CAVIN3-203ENST00000530979 ST20-MTHFSA0A0A6YYL1 179 aa27.6■■■□□ 2.01
CAVIN3-203ENST00000530979 PCDH11XQ9BZA7 1347 aa27.6■■■□□ 2.01
CAVIN3-203ENST00000530979 PCDH11YQ9BZA8 1340 aa27.6■■■□□ 2.01
CAVIN3-203ENST00000530979 TATP17735 454 aaPredicted RBP27.59■■■□□ 2.01
CAVIN3-203ENST00000530979 RRS1Q15050 365 aaKnown RBP27.59■■■□□ 2.01
CAVIN3-203ENST00000530979 MSL1Q68DK7 614 aa27.57■■■□□ 2
CAVIN3-203ENST00000530979 USHBP1Q8N6Y0 703 aa27.57■■■□□ 2
CAVIN3-203ENST00000530979 CD2APQ9Y5K6 639 aa27.57■■■□□ 2
CAVIN3-203ENST00000530979 TAF1LQ8IZX4 1826 aa27.56■■■□□ 2
CAVIN3-203ENST00000530979 PALLDQ8WX93 1383 aa27.56■■■□□ 2
CAVIN3-203ENST00000530979 INSRP06213 1382 aa27.55■■■□□ 2
CAVIN3-203ENST00000530979 FYB1O15117 783 aa27.54■■■□□ 2
CAVIN3-203ENST00000530979 KIF24Q5T7B8 1368 aa27.54■■■□□ 2
CAVIN3-203ENST00000530979 GGNBP2Q9H3C7 697 aa27.54■■■□□ 2
CAVIN3-203ENST00000530979 FLT4P35916 1363 aa27.53■■■□□ 2
CAVIN3-203ENST00000530979 KIF20BQ96Q89 1820 aa27.53■■■□□ 2
CAVIN3-203ENST00000530979 ATP10DQ9P241 1426 aa27.52■■■□□ 2
CAVIN3-203ENST00000530979 SMARCC1Q92922 1105 aaPredicted RBP27.52■■■□□ 2
CAVIN3-203ENST00000530979 NSD3Q9BZ95 1437 aa27.51■■□□□ 1.99
CAVIN3-203ENST00000530979 C4BP0C0L5 1744 aa27.5■■□□□ 1.99
CAVIN3-203ENST00000530979 TMF1P82094 1093 aa27.5■■□□□ 1.99
CAVIN3-203ENST00000530979 MPRIPQ6WCQ1 1025 aa27.5■■□□□ 1.99
CAVIN3-203ENST00000530979 AK7Q96M32 723 aa27.49■■□□□ 1.99
CAVIN3-203ENST00000530979 HSP90AB2PQ58FF8 381 aa27.48■■□□□ 1.99
CAVIN3-203ENST00000530979 ITGB4P16144 1822 aa27.48■■□□□ 1.99
CAVIN3-203ENST00000530979 GPBP1L1Q9HC44 474 aaPredicted RBP27.47■■□□□ 1.99
CAVIN3-203ENST00000530979 PKD1L3Q7Z443 1732 aa27.47■■□□□ 1.99
CAVIN3-203ENST00000530979 TOGARAM1Q9Y4F4 1720 aa27.46■■□□□ 1.99
CAVIN3-203ENST00000530979 CEP350Q5VT06 3117 aa27.45■■□□□ 1.98
CAVIN3-203ENST00000530979 CYP27B1O15528 508 aa27.45■■□□□ 1.98
CAVIN3-203ENST00000530979 CDCA8Q53HL2 280 aa27.45■■□□□ 1.98
CAVIN3-203ENST00000530979 IFFO2Q5TF58 517 aa27.44■■□□□ 1.98
CAVIN3-203ENST00000530979 ADCY9O60503 1353 aa27.44■■□□□ 1.98
CAVIN3-203ENST00000530979 UBR3Q6ZT12 1888 aa27.44■■□□□ 1.98
CAVIN3-203ENST00000530979 SPG7Q9UQ90 795 aa27.4■■□□□ 1.98
CAVIN3-203ENST00000530979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.39■■□□□ 1.98
CAVIN3-203ENST00000530979 PHF14O94880 888 aa27.39■■□□□ 1.98
CAVIN3-203ENST00000530979 SSFA2P28290 1259 aa27.39■■□□□ 1.98
CAVIN3-203ENST00000530979 NCAPD2Q15021 1401 aa27.39■■□□□ 1.97
CAVIN3-203ENST00000530979 IGSF1Q8N6C5 1336 aa27.39■■□□□ 1.97
CAVIN3-203ENST00000530979 NKX1-1Q15270 411 aaPredicted RBP27.38■■□□□ 1.97
CAVIN3-203ENST00000530979 PIGBQ92521 554 aa27.38■■□□□ 1.97
CAVIN3-203ENST00000530979 MAP2P11137 1827 aaKnown RBP27.36■■□□□ 1.97
CAVIN3-203ENST00000530979 ANKRD26Q9UPS8 1709 aa27.36■■□□□ 1.97
CAVIN3-203ENST00000530979 LOC102724428A0A0B4J2F2 783 aa27.35■■□□□ 1.97
CAVIN3-203ENST00000530979 SIK1P57059 783 aa27.35■■□□□ 1.97
CAVIN3-203ENST00000530979 EMILIN1Q9Y6C2 1016 aa27.35■■□□□ 1.97
CAVIN3-203ENST00000530979 HSPA6P17066 643 aa27.34■■□□□ 1.97
CAVIN3-203ENST00000530979 AMIGO3Q86WK7 504 aa27.34■■□□□ 1.97
CAVIN3-203ENST00000530979 ZNF526Q8TF50 670 aaPredicted RBP27.34■■□□□ 1.97
CAVIN3-203ENST00000530979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.34■■□□□ 1.97
CAVIN3-203ENST00000530979 TMOD3Q9NYL9 352 aa27.34■■□□□ 1.97
CAVIN3-203ENST00000530979 LINC00116Q8NCU8 138 aa27.32■■□□□ 1.96
CAVIN3-203ENST00000530979 PPM1GO15355 546 aaPredicted RBP27.31■■□□□ 1.96
CAVIN3-203ENST00000530979 GNPATO15228 680 aa27.3■■□□□ 1.96
CAVIN3-203ENST00000530979 CARD14Q9BXL6 1004 aa27.29■■□□□ 1.96
CAVIN3-203ENST00000530979 WASHC2AQ641Q2 1341 aa27.29■■□□□ 1.96
CAVIN3-203ENST00000530979 CICQ96RK0 1608 aaPredicted RBP27.29■■□□□ 1.96
CAVIN3-203ENST00000530979 ATP6V1AP38606 617 aa27.27■■□□□ 1.96
CAVIN3-203ENST00000530979 SMIM5Q71RC9 77 aa27.27■■□□□ 1.96
CAVIN3-203ENST00000530979 IFNL2Q8IZJ0 200 aa27.27■■□□□ 1.96
CAVIN3-203ENST00000530979 WWC3Q9ULE0 1092 aa27.27■■□□□ 1.96
CAVIN3-203ENST00000530979 PLEKHG2Q9H7P9 1386 aa27.26■■□□□ 1.95
CAVIN3-203ENST00000530979 ASAP1Q9ULH1 1129 aa27.26■■□□□ 1.95
CAVIN3-203ENST00000530979 ITPK1Q13572 414 aa27.25■■□□□ 1.95
CAVIN3-203ENST00000530979 EYA1Q99502 592 aa27.25■■□□□ 1.95
CAVIN3-203ENST00000530979 KIF13BQ9NQT8 1826 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms