RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CEP350Q5VT06 3117 aa20.53■□□□□ 0.88
CCS-206ENST00000530961 NUDCQ9Y266 331 aa20.53■□□□□ 0.88
CCS-206ENST00000530961 LTN1O94822 1766 aa20.52■□□□□ 0.88
CCS-206ENST00000530961 TATP17735 454 aaPredicted RBP20.52■□□□□ 0.88
CCS-206ENST00000530961 ANP32CO43423 234 aa20.51■□□□□ 0.87
CCS-206ENST00000530961 KCNQ2O43526 872 aa20.51■□□□□ 0.87
CCS-206ENST00000530961 NBPF14Q5TI25 921 aa20.51■□□□□ 0.87
CCS-206ENST00000530961 NCAPD2Q15021 1401 aa20.51■□□□□ 0.87
CCS-206ENST00000530961 ZCRB1Q8TBF4 217 aaKnown RBP20.5■□□□□ 0.87
CCS-206ENST00000530961 CAMKK2Q96RR4 588 aa20.5■□□□□ 0.87
CCS-206ENST00000530961 SULT6B1Q6IMI4 303 aa20.49■□□□□ 0.87
CCS-206ENST00000530961 FAM196AQ6ZSG2 479 aa20.49■□□□□ 0.87
CCS-206ENST00000530961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.49■□□□□ 0.87
CCS-206ENST00000530961 PLEKHG2Q9H7P9 1386 aa20.47■□□□□ 0.87
CCS-206ENST00000530961 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
CCS-206ENST00000530961 GIGYF1O75420 1035 aaPredicted RBP20.47■□□□□ 0.87
CCS-206ENST00000530961 OVOS2A0A0G2JMS6 1433 aa20.46■□□□□ 0.87
CCS-206ENST00000530961 THSD7AQ9UPZ6 1657 aa20.46■□□□□ 0.87
CCS-206ENST00000530961 AEBP1Q8IUX7 1158 aa20.46■□□□□ 0.87
CCS-206ENST00000530961 MARCH10Q8NA82 808 aaPredicted RBP20.46■□□□□ 0.87
CCS-206ENST00000530961 SPG7Q9UQ90 795 aa20.46■□□□□ 0.87
CCS-206ENST00000530961 KDRP35968 1356 aa20.46■□□□□ 0.87
CCS-206ENST00000530961 COL3A1P02461 1466 aaPredicted RBP20.45■□□□□ 0.86
CCS-206ENST00000530961 TNS2Q63HR2 1409 aa20.44■□□□□ 0.86
CCS-206ENST00000530961 MEGF6O75095 1541 aa20.44■□□□□ 0.86
CCS-206ENST00000530961 AMOTQ4VCS5 1084 aa20.44■□□□□ 0.86
CCS-206ENST00000530961 DDX54Q8TDD1 881 aaKnown RBP20.44■□□□□ 0.86
CCS-206ENST00000530961 HMOX1P09601 288 aa20.43■□□□□ 0.86
CCS-206ENST00000530961 PLEKHO1Q53GL0 409 aaPredicted RBP20.43■□□□□ 0.86
CCS-206ENST00000530961 FAM182BQ5T319 152 aa20.43■□□□□ 0.86
CCS-206ENST00000530961 TNS1Q9HBL0 1735 aaKnown RBP20.43■□□□□ 0.86
CCS-206ENST00000530961 FAM208AQ9UK61 1670 aaKnown RBP20.42■□□□□ 0.86
CCS-206ENST00000530961 U2AF1L5P0DN76 240 aaPredicted RBP20.42■□□□□ 0.86
CCS-206ENST00000530961 U2AF1Q01081 240 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCS-206ENST00000530961 PCDH11XQ9BZA7 1347 aa20.42■□□□□ 0.86
CCS-206ENST00000530961 PCDH11YQ9BZA8 1340 aa20.42■□□□□ 0.86
CCS-206ENST00000530961 MAP2P11137 1827 aaKnown RBP20.41■□□□□ 0.86
CCS-206ENST00000530961 FCHSD2O94868 740 aa20.41■□□□□ 0.86
CCS-206ENST00000530961 APBA3O96018 575 aa20.41■□□□□ 0.86
CCS-206ENST00000530961 BCL9O00512 1426 aa20.41■□□□□ 0.86
CCS-206ENST00000530961 RGPD5Q99666 1765 aa20.41■□□□□ 0.86
CCS-206ENST00000530961 CYP27B1O15528 508 aa20.38■□□□□ 0.85
CCS-206ENST00000530961 TRIM37O94972 964 aa20.38■□□□□ 0.85
CCS-206ENST00000530961 IFNL2Q8IZJ0 200 aa20.38■□□□□ 0.85
CCS-206ENST00000530961 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
CCS-206ENST00000530961 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
CCS-206ENST00000530961 NKX1-1Q15270 411 aaPredicted RBP20.36■□□□□ 0.85
CCS-206ENST00000530961 PARP4Q9UKK3 1724 aaKnown RBP20.36■□□□□ 0.85
CCS-206ENST00000530961 HSP90AB1P08238 724 aaKnown RBP20.35■□□□□ 0.85
CCS-206ENST00000530961 PHKG2P15735 406 aa20.35■□□□□ 0.85
CCS-206ENST00000530961 PRKAR2BP31323 418 aa20.35■□□□□ 0.85
CCS-206ENST00000530961 CHD4Q14839 1912 aa20.34■□□□□ 0.85
CCS-206ENST00000530961 WDR43Q15061 677 aaKnown RBP eCLIP20.34■□□□□ 0.85
CCS-206ENST00000530961 C1orf141Q5JVX7 400 aa20.34■□□□□ 0.85
CCS-206ENST00000530961 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
CCS-206ENST00000530961 BCL11BQ9C0K0 894 aaPredicted RBP20.34■□□□□ 0.85
CCS-206ENST00000530961 UTRNP46939 3433 aa20.34■□□□□ 0.85
CCS-206ENST00000530961 NEFMP07197 916 aa20.33■□□□□ 0.85
CCS-206ENST00000530961 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.85
CCS-206ENST00000530961 LRRC37A3O60309 1634 aa20.33■□□□□ 0.84
CCS-206ENST00000530961 RREB1Q92766 1687 aa20.32■□□□□ 0.84
CCS-206ENST00000530961 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
CCS-206ENST00000530961 GAS2L2Q8NHY3 880 aa20.32■□□□□ 0.84
CCS-206ENST00000530961 AKAP4Q5JQC9 854 aa20.31■□□□□ 0.84
CCS-206ENST00000530961 NUP188Q5SRE5 1749 aa20.3■□□□□ 0.84
CCS-206ENST00000530961 ACSBG1Q96GR2 724 aa20.3■□□□□ 0.84
CCS-206ENST00000530961 DCAF5Q96JK2 942 aa20.3■□□□□ 0.84
CCS-206ENST00000530961 PHACTR3Q96KR7 559 aa20.3■□□□□ 0.84
CCS-206ENST00000530961 MRS2Q9HD23 443 aa20.3■□□□□ 0.84
CCS-206ENST00000530961 PRIM1P49642 420 aaKnown RBP20.29■□□□□ 0.84
CCS-206ENST00000530961 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
CCS-206ENST00000530961 CCDC184Q52MB2 194 aa20.28■□□□□ 0.84
CCS-206ENST00000530961 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
CCS-206ENST00000530961 ERVV-2B6SEH9 535 aa20.27■□□□□ 0.84
CCS-206ENST00000530961 SYTL4Q96C24 671 aaPredicted RBP20.27■□□□□ 0.84
CCS-206ENST00000530961 MAPK8IP3Q9UPT6 1336 aa20.26■□□□□ 0.83
CCS-206ENST00000530961 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
CCS-206ENST00000530961 RGPD2P0DJD1 1756 aa20.25■□□□□ 0.83
CCS-206ENST00000530961 GNAT3A8MTJ3 354 aa20.24■□□□□ 0.83
CCS-206ENST00000530961 PLSCR1O15162 318 aa20.24■□□□□ 0.83
CCS-206ENST00000530961 MPRIPQ6WCQ1 1025 aa20.24■□□□□ 0.83
CCS-206ENST00000530961 PTF1AQ7RTS3 328 aa20.24■□□□□ 0.83
CCS-206ENST00000530961 SYT17Q9BSW7 474 aa20.24■□□□□ 0.83
CCS-206ENST00000530961 RUNDC1Q96C34 613 aa20.23■□□□□ 0.83
CCS-206ENST00000530961 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
CCS-206ENST00000530961 CCER2I3L3R5 266 aa20.22■□□□□ 0.83
CCS-206ENST00000530961 HTATSF1O43719 755 aaKnown RBP20.22■□□□□ 0.83
CCS-206ENST00000530961 CABP4P57796 275 aa20.22■□□□□ 0.83
CCS-206ENST00000530961 TMOD3Q9NYL9 352 aa20.22■□□□□ 0.83
CCS-206ENST00000530961 RNMTO43148 476 aaKnown RBP20.21■□□□□ 0.83
CCS-206ENST00000530961 NFE2L2Q16236 605 aa20.21■□□□□ 0.83
CCS-206ENST00000530961 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
CCS-206ENST00000530961 FHDC1Q9C0D6 1143 aaPredicted RBP20.21■□□□□ 0.83
CCS-206ENST00000530961 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
CCS-206ENST00000530961 PIGBQ92521 554 aa20.2■□□□□ 0.82
CCS-206ENST00000530961 LGR6Q9HBX8 967 aa20.19■□□□□ 0.82
CCS-206ENST00000530961 PKD1L3Q7Z443 1732 aa20.19■□□□□ 0.82
CCS-206ENST00000530961 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
CCS-206ENST00000530961 CCDC146Q8IYE0 955 aa20.18■□□□□ 0.82
CCS-206ENST00000530961 IL17REQ8NFR9 667 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms