RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.47■■□□□ 1.03
BRK1-201ENST00000530758 EXOC5O00471 708 aa21.46■■□□□ 1.03
BRK1-201ENST00000530758 TATP17735 454 aaPredicted RBP21.46■■□□□ 1.03
BRK1-201ENST00000530758 DDB1Q16531 1140 aa21.46■■□□□ 1.03
BRK1-201ENST00000530758 AEBP1Q8IUX7 1158 aa21.46■■□□□ 1.03
BRK1-201ENST00000530758 PKD1L3Q7Z443 1732 aa21.46■■□□□ 1.03
BRK1-201ENST00000530758 U2SURPO15042 1029 aaKnown RBP21.45■■□□□ 1.02
BRK1-201ENST00000530758 FCHSD2O94868 740 aa21.45■■□□□ 1.02
BRK1-201ENST00000530758 SHANK3Q9BYB0 1731 aa21.44■■□□□ 1.02
BRK1-201ENST00000530758 CCDC184Q52MB2 194 aa21.44■■□□□ 1.02
BRK1-201ENST00000530758 TNS2Q63HR2 1409 aa21.44■■□□□ 1.02
BRK1-201ENST00000530758 TNS1Q9HBL0 1735 aaKnown RBP21.43■■□□□ 1.02
BRK1-201ENST00000530758 DEFB132Q7Z7B7 95 aa21.43■■□□□ 1.02
BRK1-201ENST00000530758 ZCRB1Q8TBF4 217 aaKnown RBP21.43■■□□□ 1.02
BRK1-201ENST00000530758 HMOX1P09601 288 aa21.42■■□□□ 1.02
BRK1-201ENST00000530758 U2AF1L5P0DN76 240 aaPredicted RBP21.42■■□□□ 1.02
BRK1-201ENST00000530758 U2AF1Q01081 240 aaKnown RBP eCLIP21.42■■□□□ 1.02
BRK1-201ENST00000530758 RSPH6AQ9H0K4 717 aa21.42■■□□□ 1.02
BRK1-201ENST00000530758 PDE3BQ13370 1112 aa21.41■■□□□ 1.02
BRK1-201ENST00000530758 AMOTQ4VCS5 1084 aa21.41■■□□□ 1.02
BRK1-201ENST00000530758 BCL9O00512 1426 aa21.4■■□□□ 1.02
BRK1-201ENST00000530758 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
BRK1-201ENST00000530758 PLEKHO1Q53GL0 409 aaPredicted RBP21.39■■□□□ 1.01
BRK1-201ENST00000530758 MARCH10Q8NA82 808 aaPredicted RBP21.39■■□□□ 1.01
BRK1-201ENST00000530758 PNISRQ8TF01 805 aaKnown RBP21.39■■□□□ 1.01
BRK1-201ENST00000530758 SPG7Q9UQ90 795 aa21.39■■□□□ 1.01
BRK1-201ENST00000530758 PNNQ9H307 717 aaKnown RBP21.38■■□□□ 1.01
BRK1-201ENST00000530758 PLEKHF1Q96S99 279 aa21.37■■□□□ 1.01
BRK1-201ENST00000530758 MRS2Q9HD23 443 aa21.37■■□□□ 1.01
BRK1-201ENST00000530758 PCDH11XQ9BZA7 1347 aa21.36■■□□□ 1.01
BRK1-201ENST00000530758 PCDH11YQ9BZA8 1340 aa21.36■■□□□ 1.01
BRK1-201ENST00000530758 ADAMTS8Q9UP79 889 aa21.36■■□□□ 1.01
BRK1-201ENST00000530758 CYP27B1O15528 508 aa21.35■■□□□ 1.01
BRK1-201ENST00000530758 PRKAR2BP31323 418 aa21.35■■□□□ 1.01
BRK1-201ENST00000530758 WDR43Q15061 677 aaKnown RBP eCLIP21.35■■□□□ 1.01
BRK1-201ENST00000530758 NKX1-1Q15270 411 aaPredicted RBP21.35■■□□□ 1.01
BRK1-201ENST00000530758 SBF2Q86WG5 1849 aa21.34■■□□□ 1.01
BRK1-201ENST00000530758 FAM196AQ6ZSG2 479 aa21.34■■□□□ 1.01
BRK1-201ENST00000530758 MIER1Q8N108 512 aa21.34■■□□□ 1.01
BRK1-201ENST00000530758 PHACTR3Q96KR7 559 aa21.34■■□□□ 1.01
BRK1-201ENST00000530758 IFNL2Q8IZJ0 200 aa21.33■■□□□ 1.01
BRK1-201ENST00000530758 DDX54Q8TDD1 881 aaKnown RBP21.33■■□□□ 1.01
BRK1-201ENST00000530758 PHKG2P15735 406 aa21.32■■□□□ 1
BRK1-201ENST00000530758 MTHFSDQ2M296 383 aaKnown RBP21.32■■□□□ 1
BRK1-201ENST00000530758 SF3B2Q13435 895 aaKnown RBP21.31■■□□□ 1
BRK1-201ENST00000530758 GAS2L2Q8NHY3 880 aa21.3■■□□□ 1
BRK1-201ENST00000530758 TRIM37O94972 964 aa21.29■■□□□ 1
BRK1-201ENST00000530758 EN1Q05925 392 aaPredicted RBP21.29■■□□□ 1
BRK1-201ENST00000530758 AKAP4Q5JQC9 854 aa21.29■■□□□ 1
BRK1-201ENST00000530758 HSP90AB1P08238 724 aaKnown RBP21.28■■□□□ 1
BRK1-201ENST00000530758 ZNF530Q6P9A1 599 aaPredicted RBP21.28■■□□□ 1
BRK1-201ENST00000530758 RUNDC1Q96C34 613 aa21.28■■□□□ 1
BRK1-201ENST00000530758 ADAMTS7Q9UKP4 1686 aa21.28■■□□□ 1
BRK1-201ENST00000530758 VIRMAQ69YN4 1812 aaKnown RBP21.27■■□□□ 1
BRK1-201ENST00000530758 BAG6P46379 1132 aa21.27■■□□□ 1
BRK1-201ENST00000530758 DLG5Q8TDM6 1919 aa21.27■■□□□ 1
BRK1-201ENST00000530758 SCN11AQ9UI33 1791 aa21.26■□□□□ 0.99
BRK1-201ENST00000530758 SRCAPQ6ZRS2 3230 aa21.26■□□□□ 0.99
BRK1-201ENST00000530758 NEFMP07197 916 aa21.26■□□□□ 0.99
BRK1-201ENST00000530758 DCAF5Q96JK2 942 aa21.26■□□□□ 0.99
BRK1-201ENST00000530758 KAT6BQ8WYB5 2073 aa21.25■□□□□ 0.99
BRK1-201ENST00000530758 RREB1Q92766 1687 aa21.25■□□□□ 0.99
BRK1-201ENST00000530758 C1orf141Q5JVX7 400 aa21.25■□□□□ 0.99
BRK1-201ENST00000530758 ITGB4P16144 1822 aa21.25■□□□□ 0.99
BRK1-201ENST00000530758 NHSQ6T4R5 1651 aa21.24■□□□□ 0.99
BRK1-201ENST00000530758 TOGARAM1Q9Y4F4 1720 aa21.24■□□□□ 0.99
BRK1-201ENST00000530758 HTATSF1O43719 755 aaKnown RBP21.24■□□□□ 0.99
BRK1-201ENST00000530758 CAMKK2Q96RR4 588 aa21.24■□□□□ 0.99
BRK1-201ENST00000530758 DOT1LQ8TEK3 1739 aa21.24■□□□□ 0.99
BRK1-201ENST00000530758 GNAT3A8MTJ3 354 aa21.23■□□□□ 0.99
BRK1-201ENST00000530758 ERVV-2B6SEH9 535 aa21.23■□□□□ 0.99
BRK1-201ENST00000530758 EZH2Q15910 746 aaKnown RBP21.23■□□□□ 0.99
BRK1-201ENST00000530758 NFE2L2Q16236 605 aa21.23■□□□□ 0.99
BRK1-201ENST00000530758 MAPK8IP3Q9UPT6 1336 aa21.23■□□□□ 0.99
BRK1-201ENST00000530758 KDM6AO15550 1401 aaPredicted RBP21.22■□□□□ 0.99
BRK1-201ENST00000530758 PTF1AQ7RTS3 328 aa21.22■□□□□ 0.99
BRK1-201ENST00000530758 BCL11BQ9C0K0 894 aaPredicted RBP21.22■□□□□ 0.99
BRK1-201ENST00000530758 MAP3K5Q99683 1374 aa21.22■□□□□ 0.99
BRK1-201ENST00000530758 TMPOP42166 694 aaKnown RBP21.21■□□□□ 0.99
BRK1-201ENST00000530758 NCBP3Q53F19 620 aaKnown RBP21.21■□□□□ 0.99
BRK1-201ENST00000530758 CCDC146Q8IYE0 955 aa21.21■□□□□ 0.99
BRK1-201ENST00000530758 NUP188Q5SRE5 1749 aa21.21■□□□□ 0.99
BRK1-201ENST00000530758 APBA3O96018 575 aa21.2■□□□□ 0.98
BRK1-201ENST00000530758 MPRIPQ6WCQ1 1025 aa21.2■□□□□ 0.98
BRK1-201ENST00000530758 RNMTO43148 476 aaKnown RBP21.19■□□□□ 0.98
BRK1-201ENST00000530758 KCNQ2O43526 872 aa21.19■□□□□ 0.98
BRK1-201ENST00000530758 PRIM1P49642 420 aaKnown RBP21.19■□□□□ 0.98
BRK1-201ENST00000530758 FAM9BQ8IZU0 186 aa21.19■□□□□ 0.98
BRK1-201ENST00000530758 IL17REQ8NFR9 667 aa21.19■□□□□ 0.98
BRK1-201ENST00000530758 LGR6Q9HBX8 967 aa21.19■□□□□ 0.98
BRK1-201ENST00000530758 CEMIPQ8WUJ3 1361 aa21.19■□□□□ 0.98
BRK1-201ENST00000530758 ACSBG1Q96GR2 724 aa21.17■□□□□ 0.98
BRK1-201ENST00000530758 MRC1P22897 1456 aa21.17■□□□□ 0.98
BRK1-201ENST00000530758 RGPD3A6NKT7 1758 aaPredicted RBP21.17■□□□□ 0.98
BRK1-201ENST00000530758 RGPD4Q7Z3J3 1758 aa21.17■□□□□ 0.98
BRK1-201ENST00000530758 BTAF1O14981 1849 aa21.17■□□□□ 0.98
BRK1-201ENST00000530758 SIPA1L3O60292 1781 aaPredicted RBP21.16■□□□□ 0.98
BRK1-201ENST00000530758 APAF1O14727 1248 aa21.16■□□□□ 0.98
BRK1-201ENST00000530758 RIPK4P57078 832 aa21.16■□□□□ 0.98
BRK1-201ENST00000530758 PSDA5PKW4 1024 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms