RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 RREB1Q92766 1687 aa20.36■□□□□ 0.85
PPFIA1-216ENST00000530746 ZCRB1Q8TBF4 217 aaKnown RBP20.36■□□□□ 0.85
PPFIA1-216ENST00000530746 TATP17735 454 aaPredicted RBP20.35■□□□□ 0.85
PPFIA1-216ENST00000530746 EIF4A2Q14240 407 aaKnown RBP20.35■□□□□ 0.85
PPFIA1-216ENST00000530746 CC2D1BQ5T0F9 858 aaKnown RBP20.35■□□□□ 0.85
PPFIA1-216ENST00000530746 PTF1AQ7RTS3 328 aa20.35■□□□□ 0.85
PPFIA1-216ENST00000530746 DDX54Q8TDD1 881 aaKnown RBP20.35■□□□□ 0.85
PPFIA1-216ENST00000530746 EYA1Q99502 592 aa20.34■□□□□ 0.85
PPFIA1-216ENST00000530746 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.85
PPFIA1-216ENST00000530746 NUP188Q5SRE5 1749 aa20.33■□□□□ 0.84
PPFIA1-216ENST00000530746 PLSCR1O15162 318 aa20.32■□□□□ 0.84
PPFIA1-216ENST00000530746 BTAF1O14981 1849 aa20.32■□□□□ 0.84
PPFIA1-216ENST00000530746 DOT1LQ8TEK3 1739 aa20.31■□□□□ 0.84
PPFIA1-216ENST00000530746 KCNQ2O43526 872 aa20.31■□□□□ 0.84
PPFIA1-216ENST00000530746 ACSBG1Q96GR2 724 aa20.31■□□□□ 0.84
PPFIA1-216ENST00000530746 IGSF1Q8N6C5 1336 aa20.29■□□□□ 0.84
PPFIA1-216ENST00000530746 ZEB1P37275 1124 aaPredicted RBP20.29■□□□□ 0.84
PPFIA1-216ENST00000530746 PCDH11XQ9BZA7 1347 aa20.28■□□□□ 0.84
PPFIA1-216ENST00000530746 PCDH11YQ9BZA8 1340 aa20.28■□□□□ 0.84
PPFIA1-216ENST00000530746 MTHFSP49914 203 aa20.28■□□□□ 0.84
PPFIA1-216ENST00000530746 CNGB1Q14028 1251 aaPredicted RBP20.27■□□□□ 0.84
PPFIA1-216ENST00000530746 PLEKHG2Q9H7P9 1386 aa20.25■□□□□ 0.83
PPFIA1-216ENST00000530746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.838e-7■■■■□ 23.6
PPFIA1-216ENST00000530746 SPG7Q9UQ90 795 aa20.25■□□□□ 0.83
PPFIA1-216ENST00000530746 CYP27B1O15528 508 aa20.24■□□□□ 0.83
PPFIA1-216ENST00000530746 IL13P35225 146 aa20.24■□□□□ 0.83
PPFIA1-216ENST00000530746 SRCAPQ6ZRS2 3230 aa20.23■□□□□ 0.83
PPFIA1-216ENST00000530746 PROM2Q8N271 834 aa20.23■□□□□ 0.83
PPFIA1-216ENST00000530746 SYTL4Q96C24 671 aaPredicted RBP20.23■□□□□ 0.83
PPFIA1-216ENST00000530746 PSDA5PKW4 1024 aaPredicted RBP20.22■□□□□ 0.83
PPFIA1-216ENST00000530746 PRIM1P49642 420 aaKnown RBP20.22■□□□□ 0.83
PPFIA1-216ENST00000530746 NBPF14Q5TI25 921 aa20.22■□□□□ 0.83
PPFIA1-216ENST00000530746 ITGB4P16144 1822 aa20.22■□□□□ 0.83
PPFIA1-216ENST00000530746 TOGARAM1Q9Y4F4 1720 aa20.22■□□□□ 0.83
PPFIA1-216ENST00000530746 R3HDM1Q15032 1099 aaKnown RBP20.21■□□□□ 0.83
PPFIA1-216ENST00000530746 TXNRD1Q16881 649 aa20.21■□□□□ 0.83
PPFIA1-216ENST00000530746 KDRP35968 1356 aa20.2■□□□□ 0.82
PPFIA1-216ENST00000530746 NKX1-1Q15270 411 aaPredicted RBP20.19■□□□□ 0.82
PPFIA1-216ENST00000530746 SULT6B1Q6IMI4 303 aa20.19■□□□□ 0.82
PPFIA1-216ENST00000530746 AEBP1Q8IUX7 1158 aa20.19■□□□□ 0.82
PPFIA1-216ENST00000530746 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
PPFIA1-216ENST00000530746 DIAPH1O60610 1272 aaKnown RBP20.18■□□□□ 0.82
PPFIA1-216ENST00000530746 LY75O60449 1722 aa20.18■□□□□ 0.82
PPFIA1-216ENST00000530746 PHKG2P15735 406 aa20.17■□□□□ 0.82
PPFIA1-216ENST00000530746 PLEKHO1Q53GL0 409 aaPredicted RBP20.17■□□□□ 0.82
PPFIA1-216ENST00000530746 IFNL2Q8IZJ0 200 aa20.17■□□□□ 0.82
PPFIA1-216ENST00000530746 AMOTQ4VCS5 1084 aa20.15■□□□□ 0.82
PPFIA1-216ENST00000530746 PAPPAQ13219 1627 aa20.14■□□□□ 0.81
PPFIA1-216ENST00000530746 PPP2R1AP30153 589 aa20.14■□□□□ 0.81
PPFIA1-216ENST00000530746 ANO8Q9HCE9 1232 aaPredicted RBP20.14■□□□□ 0.81
PPFIA1-216ENST00000530746 MPRIPQ6WCQ1 1025 aa20.13■□□□□ 0.81
PPFIA1-216ENST00000530746 HMOX1P09601 288 aa20.12■□□□□ 0.81
PPFIA1-216ENST00000530746 SLC27A3Q5K4L6 730 aa20.12■□□□□ 0.81
PPFIA1-216ENST00000530746 CFAP53Q96M91 514 aa20.12■□□□□ 0.81
PPFIA1-216ENST00000530746 LRP5O75197 1615 aa20.12■□□□□ 0.81
PPFIA1-216ENST00000530746 DDX10Q13206 875 aaKnown RBP20.11■□□□□ 0.81
PPFIA1-216ENST00000530746 ZNF530Q6P9A1 599 aaPredicted RBP20.11■□□□□ 0.81
PPFIA1-216ENST00000530746 LRRC4BQ9NT99 713 aa20.11■□□□□ 0.81
PPFIA1-216ENST00000530746 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
PPFIA1-216ENST00000530746 STK32BQ9NY57 414 aa20.1■□□□□ 0.81
PPFIA1-216ENST00000530746 VIRMAQ69YN4 1812 aaKnown RBP20.09■□□□□ 0.81
PPFIA1-216ENST00000530746 U2SURPO15042 1029 aaKnown RBP20.09■□□□□ 0.81
PPFIA1-216ENST00000530746 SLC15A2Q16348 729 aa20.09■□□□□ 0.81
PPFIA1-216ENST00000530746 PIGBQ92521 554 aa20.09■□□□□ 0.81
PPFIA1-216ENST00000530746 DCAF5Q96JK2 942 aa20.09■□□□□ 0.81
PPFIA1-216ENST00000530746 CASZ1Q86V15 1759 aa20.08■□□□□ 0.81
PPFIA1-216ENST00000530746 C1orf141Q5JVX7 400 aa20.08■□□□□ 0.81
PPFIA1-216ENST00000530746 TMOD3Q9NYL9 352 aa20.08■□□□□ 0.81
PPFIA1-216ENST00000530746 SCN11AQ9UI33 1791 aa20.08■□□□□ 0.8
PPFIA1-216ENST00000530746 TAF1LQ8IZX4 1826 aa20.07■□□□□ 0.8
PPFIA1-216ENST00000530746 CCNL1Q9UK58 526 aaPredicted RBP20.07■□□□□ 0.8
PPFIA1-216ENST00000530746 KDM6AO15550 1401 aaPredicted RBP20.07■□□□□ 0.8
PPFIA1-216ENST00000530746 PALLDQ8WX93 1383 aa20.07■□□□□ 0.8
PPFIA1-216ENST00000530746 ERVV-2B6SEH9 535 aa20.06■□□□□ 0.8
PPFIA1-216ENST00000530746 KCNQ4P56696 695 aa20.06■□□□□ 0.8
PPFIA1-216ENST00000530746 SMARCC1Q92922 1105 aaPredicted RBP20.06■□□□□ 0.8
PPFIA1-216ENST00000530746 QSER1Q2KHR3 1735 aa20.05■□□□□ 0.8
PPFIA1-216ENST00000530746 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
PPFIA1-216ENST00000530746 C5P01031 1676 aa20.05■□□□□ 0.8
PPFIA1-216ENST00000530746 AKAP4Q5JQC9 854 aa20.04■□□□□ 0.8
PPFIA1-216ENST00000530746 TUBGCP6Q96RT7 1819 aa20.04■□□□□ 0.8
PPFIA1-216ENST00000530746 RALBP1Q15311 655 aa20.03■□□□□ 0.8
PPFIA1-216ENST00000530746 ZNF827Q17R98 1081 aa20.03■□□□□ 0.8
PPFIA1-216ENST00000530746 AKT1S1Q96B36 256 aa20.03■□□□□ 0.8
PPFIA1-216ENST00000530746 MTHFSDQ2M296 383 aaKnown RBP20.02■□□□□ 0.8
PPFIA1-216ENST00000530746 PDGFDQ9GZP0 370 aaPredicted RBP20.02■□□□□ 0.8
PPFIA1-216ENST00000530746 HMGB2P26583 209 aaKnown RBP20.01■□□□□ 0.79
PPFIA1-216ENST00000530746 CABP4P57796 275 aa20.01■□□□□ 0.79
PPFIA1-216ENST00000530746 ASAP1Q9ULH1 1129 aa20.01■□□□□ 0.79
PPFIA1-216ENST00000530746 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
PPFIA1-216ENST00000530746 ATG3Q9NT62 314 aa20■□□□□ 0.79
PPFIA1-216ENST00000530746 ADAMTS7Q9UKP4 1686 aa20■□□□□ 0.79
PPFIA1-216ENST00000530746 U2AF1L5P0DN76 240 aaPredicted RBP19.99■□□□□ 0.79
PPFIA1-216ENST00000530746 U2AF1Q01081 240 aaKnown RBP eCLIP19.99■□□□□ 0.797e-8■■■■■ 45.8
PPFIA1-216ENST00000530746 LOC102724428A0A0B4J2F2 783 aa19.98■□□□□ 0.79
PPFIA1-216ENST00000530746 PRKAR2BP31323 418 aa19.98■□□□□ 0.79
PPFIA1-216ENST00000530746 SIK1P57059 783 aa19.98■□□□□ 0.79
PPFIA1-216ENST00000530746 SPON1Q9HCB6 807 aa19.98■□□□□ 0.79
PPFIA1-216ENST00000530746 TFCP2L1Q9NZI6 479 aa19.98■□□□□ 0.79
PPFIA1-216ENST00000530746 C4BP0C0L5 1744 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms