RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 EIF4G2P78344 907 aaKnown RBP eCLIP17.75■□□□□ 0.43
RPS3-216ENST00000530721 RAPGEF4Q8WZA2 1011 aa17.75■□□□□ 0.43
RPS3-216ENST00000530721 USHBP1Q8N6Y0 703 aa17.74■□□□□ 0.43
RPS3-216ENST00000530721 PDGFDQ9GZP0 370 aaPredicted RBP17.74■□□□□ 0.43
RPS3-216ENST00000530721 SHANK3Q9BYB0 1731 aa17.74■□□□□ 0.43
RPS3-216ENST00000530721 PAPPAQ13219 1627 aa17.73■□□□□ 0.43
RPS3-216ENST00000530721 SYTL4Q96C24 671 aaPredicted RBP17.73■□□□□ 0.43
RPS3-216ENST00000530721 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
RPS3-216ENST00000530721 EMILIN1Q9Y6C2 1016 aa17.73■□□□□ 0.43
RPS3-216ENST00000530721 ZBTB7AO95365 584 aa17.72■□□□□ 0.43
RPS3-216ENST00000530721 HSPA5P11021 654 aaKnown RBP17.72■□□□□ 0.43
RPS3-216ENST00000530721 TATP17735 454 aaPredicted RBP17.72■□□□□ 0.43
RPS3-216ENST00000530721 PRIM1P49642 420 aaKnown RBP17.72■□□□□ 0.43
RPS3-216ENST00000530721 DOT1LQ8TEK3 1739 aa17.72■□□□□ 0.43
RPS3-216ENST00000530721 SLC27A3Q5K4L6 730 aa17.71■□□□□ 0.43
RPS3-216ENST00000530721 LRRC4BQ9NT99 713 aa17.71■□□□□ 0.43
RPS3-216ENST00000530721 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
RPS3-216ENST00000530721 NSD2O96028 1365 aa17.69■□□□□ 0.42
RPS3-216ENST00000530721 PPM1GO15355 546 aaPredicted RBP17.69■□□□□ 0.42
RPS3-216ENST00000530721 MTFR1LQ9H019 292 aa17.69■□□□□ 0.42
RPS3-216ENST00000530721 WASHC2AQ641Q2 1341 aa17.69■□□□□ 0.42
RPS3-216ENST00000530721 PCDH11XQ9BZA7 1347 aa17.69■□□□□ 0.42
RPS3-216ENST00000530721 PCDH11YQ9BZA8 1340 aa17.69■□□□□ 0.42
RPS3-216ENST00000530721 PTGER2P43116 358 aa17.68■□□□□ 0.42
RPS3-216ENST00000530721 ATF5Q9Y2D1 282 aaPredicted RBP17.68■□□□□ 0.42
RPS3-216ENST00000530721 ZNF827Q17R98 1081 aa17.67■□□□□ 0.42
RPS3-216ENST00000530721 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
RPS3-216ENST00000530721 NCAPD2Q15021 1401 aa17.66■□□□□ 0.42
RPS3-216ENST00000530721 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
RPS3-216ENST00000530721 POLKQ9UBT6 870 aa17.66■□□□□ 0.42
RPS3-216ENST00000530721 LY75O60449 1722 aa17.65■□□□□ 0.42
RPS3-216ENST00000530721 PANK3Q9H999 370 aa17.64■□□□□ 0.41
RPS3-216ENST00000530721 DCAF8L1A6NGE4 600 aa17.63■□□□□ 0.41
RPS3-216ENST00000530721 CYP27B1O15528 508 aa17.63■□□□□ 0.41
RPS3-216ENST00000530721 SGIP1Q9BQI5 828 aa17.63■□□□□ 0.41
RPS3-216ENST00000530721 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
RPS3-216ENST00000530721 PKD1L3Q7Z443 1732 aa17.63■□□□□ 0.41
RPS3-216ENST00000530721 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
RPS3-216ENST00000530721 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
RPS3-216ENST00000530721 KCNQ4P56696 695 aa17.62■□□□□ 0.41
RPS3-216ENST00000530721 EYA1Q99502 592 aa17.62■□□□□ 0.41
RPS3-216ENST00000530721 SLC16A10Q8TF71 515 aa17.61■□□□□ 0.41
RPS3-216ENST00000530721 TFCP2L1Q9NZI6 479 aa17.61■□□□□ 0.41
RPS3-216ENST00000530721 SPG7Q9UQ90 795 aa17.61■□□□□ 0.41
RPS3-216ENST00000530721 PNPLA7Q6ZV29 1317 aa17.6■□□□□ 0.41
RPS3-216ENST00000530721 EIF4A2Q14240 407 aaKnown RBP17.59■□□□□ 0.41
RPS3-216ENST00000530721 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
RPS3-216ENST00000530721 FHDC1Q9C0D6 1143 aaPredicted RBP17.59■□□□□ 0.41
RPS3-216ENST00000530721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.59■□□□□ 0.41
RPS3-216ENST00000530721 HMGB2P26583 209 aaKnown RBP17.58■□□□□ 0.4
RPS3-216ENST00000530721 NKX1-1Q15270 411 aaPredicted RBP17.58■□□□□ 0.4
RPS3-216ENST00000530721 ARXQ96QS3 562 aa17.58■□□□□ 0.4
RPS3-216ENST00000530721 SYT17Q9BSW7 474 aa17.58■□□□□ 0.4
RPS3-216ENST00000530721 TUBGCP6Q96RT7 1819 aa17.58■□□□□ 0.4
RPS3-216ENST00000530721 TOGARAM1Q9Y4F4 1720 aa17.58■□□□□ 0.4
RPS3-216ENST00000530721 PALLDQ8WX93 1383 aa17.57■□□□□ 0.4
RPS3-216ENST00000530721 ITGB4P16144 1822 aa17.56■□□□□ 0.4
RPS3-216ENST00000530721 PLEKHG2Q9H7P9 1386 aa17.56■□□□□ 0.4
RPS3-216ENST00000530721 SMARCC1Q92922 1105 aaPredicted RBP17.56■□□□□ 0.4
RPS3-216ENST00000530721 KNSTRNQ9Y448 316 aa17.56■□□□□ 0.4
RPS3-216ENST00000530721 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
RPS3-216ENST00000530721 YY1P25490 414 aa17.55■□□□□ 0.4
RPS3-216ENST00000530721 POLD1P28340 1107 aa17.55■□□□□ 0.4
RPS3-216ENST00000530721 MORC1Q86VD1 984 aa17.55■□□□□ 0.4
RPS3-216ENST00000530721 MAP3K5Q99683 1374 aa17.54■□□□□ 0.4
RPS3-216ENST00000530721 IFNL2Q8IZJ0 200 aa17.54■□□□□ 0.4
RPS3-216ENST00000530721 PIGBQ92521 554 aa17.54■□□□□ 0.4
RPS3-216ENST00000530721 C5P01031 1676 aa17.54■□□□□ 0.4
RPS3-216ENST00000530721 COL24A1Q17RW2 1714 aa17.53■□□□□ 0.4
RPS3-216ENST00000530721 PHKG2P15735 406 aa17.53■□□□□ 0.4
RPS3-216ENST00000530721 KIF7Q2M1P5 1343 aa17.52■□□□□ 0.4
RPS3-216ENST00000530721 TMOD3Q9NYL9 352 aa17.52■□□□□ 0.4
RPS3-216ENST00000530721 TAF1LQ8IZX4 1826 aa17.51■□□□□ 0.39
RPS3-216ENST00000530721 MSH5O43196 834 aa17.51■□□□□ 0.39
RPS3-216ENST00000530721 COL23A1Q86Y22 540 aaPredicted RBP17.51■□□□□ 0.39
RPS3-216ENST00000530721 FLAD1Q8NFF5 587 aa17.5■□□□□ 0.39
RPS3-216ENST00000530721 UTRNP46939 3433 aa17.5■□□□□ 0.39
RPS3-216ENST00000530721 AMER1Q5JTC6 1135 aaPredicted RBP17.49■□□□□ 0.39
RPS3-216ENST00000530721 C4BP0C0L5 1744 aa17.48■□□□□ 0.39
RPS3-216ENST00000530721 LOC102724428A0A0B4J2F2 783 aa17.48■□□□□ 0.39
RPS3-216ENST00000530721 SIK1P57059 783 aa17.48■□□□□ 0.39
RPS3-216ENST00000530721 PLEKHO1Q53GL0 409 aaPredicted RBP17.48■□□□□ 0.39
RPS3-216ENST00000530721 AK7Q96M32 723 aa17.48■□□□□ 0.39
RPS3-216ENST00000530721 HSP90AB1P08238 724 aaKnown RBP17.47■□□□□ 0.39
RPS3-216ENST00000530721 AMOTQ4VCS5 1084 aa17.47■□□□□ 0.39
RPS3-216ENST00000530721 KLHL34Q8N239 644 aa17.47■□□□□ 0.39
RPS3-216ENST00000530721 DCAF5Q96JK2 942 aa17.46■□□□□ 0.39
RPS3-216ENST00000530721 ASAP1Q9ULH1 1129 aa17.46■□□□□ 0.39
RPS3-216ENST00000530721 ERVV-2B6SEH9 535 aa17.45■□□□□ 0.38
RPS3-216ENST00000530721 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
RPS3-216ENST00000530721 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
RPS3-216ENST00000530721 KDRP35968 1356 aa17.44■□□□□ 0.38
RPS3-216ENST00000530721 PER1O15534 1290 aaPredicted RBP17.44■□□□□ 0.38
RPS3-216ENST00000530721 IL13P35225 146 aa17.44■□□□□ 0.38
RPS3-216ENST00000530721 MSL1Q68DK7 614 aa17.44■□□□□ 0.38
RPS3-216ENST00000530721 SULT6B1Q6IMI4 303 aa17.44■□□□□ 0.38
RPS3-216ENST00000530721 ATG3Q9NT62 314 aa17.44■□□□□ 0.38
RPS3-216ENST00000530721 ATP6V1AP38606 617 aa17.43■□□□□ 0.38
RPS3-216ENST00000530721 LINC00116Q8NCU8 138 aa17.43■□□□□ 0.38
RPS3-216ENST00000530721 UBR3Q6ZT12 1888 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms