RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 IP6K1Q92551 441 aa19.15■□□□□ 0.66
CTSB-217ENST00000530296 MAP3K19Q56UN5 1328 aa19.15■□□□□ 0.66
CTSB-217ENST00000530296 FHDC1Q9C0D6 1143 aaPredicted RBP19.14■□□□□ 0.65
CTSB-217ENST00000530296 PDGFDQ9GZP0 370 aaPredicted RBP19.14■□□□□ 0.65
CTSB-217ENST00000530296 MAP3K5Q99683 1374 aa19.13■□□□□ 0.65
CTSB-217ENST00000530296 UTRNP46939 3433 aa19.13■□□□□ 0.65
CTSB-217ENST00000530296 SLC16A10Q8TF71 515 aa19.12■□□□□ 0.65
CTSB-217ENST00000530296 SGIP1Q9BQI5 828 aa19.12■□□□□ 0.65
CTSB-217ENST00000530296 CHD4Q14839 1912 aa19.12■□□□□ 0.65
CTSB-217ENST00000530296 FLT4P35916 1363 aa19.11■□□□□ 0.65
CTSB-217ENST00000530296 HOXC9P31274 260 aa19.11■□□□□ 0.65
CTSB-217ENST00000530296 RRS1Q15050 365 aaKnown RBP19.11■□□□□ 0.65
CTSB-217ENST00000530296 SLC27A3Q5K4L6 730 aa19.11■□□□□ 0.65
CTSB-217ENST00000530296 ANKRD24Q8TF21 1146 aa19.11■□□□□ 0.65
CTSB-217ENST00000530296 ARXQ96QS3 562 aa19.11■□□□□ 0.65
CTSB-217ENST00000530296 KAT6BQ8WYB5 2073 aa19.1■□□□□ 0.65
CTSB-217ENST00000530296 SMG6Q86US8 1419 aaKnown RBP19.1■□□□□ 0.65
CTSB-217ENST00000530296 ACSBG1Q96GR2 724 aa19.1■□□□□ 0.65
CTSB-217ENST00000530296 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
CTSB-217ENST00000530296 ZNF784Q8NCA9 323 aaPredicted RBP19.09■□□□□ 0.65
CTSB-217ENST00000530296 PAPPAQ13219 1627 aa19.09■□□□□ 0.65
CTSB-217ENST00000530296 BTAF1O14981 1849 aa19.09■□□□□ 0.65
CTSB-217ENST00000530296 INSRP06213 1382 aa19.08■□□□□ 0.65
CTSB-217ENST00000530296 FAM208AQ9UK61 1670 aaKnown RBP19.08■□□□□ 0.65
CTSB-217ENST00000530296 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.64
CTSB-217ENST00000530296 FBLN1P23142 703 aa19.08■□□□□ 0.64
CTSB-217ENST00000530296 HMGB2P26583 209 aaKnown RBP19.08■□□□□ 0.64
CTSB-217ENST00000530296 CC2D1BQ5T0F9 858 aaKnown RBP19.08■□□□□ 0.64
CTSB-217ENST00000530296 PPM1GO15355 546 aaPredicted RBP19.07■□□□□ 0.64
CTSB-217ENST00000530296 POLKQ9UBT6 870 aa19.07■□□□□ 0.64
CTSB-217ENST00000530296 EMILIN1Q9Y6C2 1016 aa19.06■□□□□ 0.64
CTSB-217ENST00000530296 MAP2P11137 1827 aaKnown RBP19.05■□□□□ 0.64
CTSB-217ENST00000530296 POLD1P28340 1107 aa19.05■□□□□ 0.64
CTSB-217ENST00000530296 DDX10Q13206 875 aaKnown RBP19.05■□□□□ 0.64
CTSB-217ENST00000530296 QSER1Q2KHR3 1735 aa19.05■□□□□ 0.64
CTSB-217ENST00000530296 HSP90AB2PQ58FF8 381 aa19.03■□□□□ 0.64
CTSB-217ENST00000530296 LTV1Q96GA3 475 aaPredicted RBP19.03■□□□□ 0.64
CTSB-217ENST00000530296 AKT1S1Q96B36 256 aa19.02■□□□□ 0.64
CTSB-217ENST00000530296 LRRC4BQ9NT99 713 aa19.02■□□□□ 0.64
CTSB-217ENST00000530296 ZNF827Q17R98 1081 aa19.01■□□□□ 0.63
CTSB-217ENST00000530296 DDX54Q8TDD1 881 aaKnown RBP19.01■□□□□ 0.63
CTSB-217ENST00000530296 GPR162Q16538 588 aa19■□□□□ 0.63
CTSB-217ENST00000530296 TFCP2L1Q9NZI6 479 aa19■□□□□ 0.63
CTSB-217ENST00000530296 CNGB1Q14028 1251 aaPredicted RBP18.99■□□□□ 0.63
CTSB-217ENST00000530296 MTHFSP49914 203 aa18.98■□□□□ 0.63
CTSB-217ENST00000530296 COL24A1Q17RW2 1714 aa18.97■□□□□ 0.63
CTSB-217ENST00000530296 C1QTNF8P60827 252 aa18.97■□□□□ 0.63
CTSB-217ENST00000530296 ZCRB1Q8TBF4 217 aaKnown RBP18.97■□□□□ 0.63
CTSB-217ENST00000530296 SYTL4Q96C24 671 aaPredicted RBP18.97■□□□□ 0.63
CTSB-217ENST00000530296 RALBP1Q15311 655 aa18.96■□□□□ 0.63
CTSB-217ENST00000530296 PNPLA7Q6ZV29 1317 aa18.96■□□□□ 0.63
CTSB-217ENST00000530296 PRIM1P49642 420 aaKnown RBP18.95■□□□□ 0.62
CTSB-217ENST00000530296 NBPF6Q5VWK0 638 aa18.95■□□□□ 0.62
CTSB-217ENST00000530296 NBPF4Q96M43 638 aa18.95■□□□□ 0.62
CTSB-217ENST00000530296 CFAP53Q96M91 514 aa18.95■□□□□ 0.62
CTSB-217ENST00000530296 LY75O60449 1722 aa18.94■□□□□ 0.62
CTSB-217ENST00000530296 GRIN3BO60391 1043 aa18.94■□□□□ 0.62
CTSB-217ENST00000530296 EIF4A2Q14240 407 aaKnown RBP18.94■□□□□ 0.62
CTSB-217ENST00000530296 RAPGEF4Q8WZA2 1011 aa18.94■□□□□ 0.62
CTSB-217ENST00000530296 SENP3-EIF4A1A0A087X0R7 540 aa18.92■□□□□ 0.62
CTSB-217ENST00000530296 PPP2R1AP30153 589 aa18.92■□□□□ 0.62
CTSB-217ENST00000530296 FLAD1Q8NFF5 587 aa18.92■□□□□ 0.62
CTSB-217ENST00000530296 GOLGB1Q14789 3259 aaKnown RBP18.92■□□□□ 0.62
CTSB-217ENST00000530296 DOT1LQ8TEK3 1739 aa18.91■□□□□ 0.62
CTSB-217ENST00000530296 KLHL34Q8N239 644 aa18.91■□□□□ 0.62
CTSB-217ENST00000530296 EYA1Q99502 592 aa18.91■□□□□ 0.62
CTSB-217ENST00000530296 CCNL1Q9UK58 526 aaPredicted RBP18.91■□□□□ 0.62
CTSB-217ENST00000530296 DIAPH1O60610 1272 aaKnown RBP18.9■□□□□ 0.62
CTSB-217ENST00000530296 GIGYF1O75420 1035 aaPredicted RBP18.9■□□□□ 0.62
CTSB-217ENST00000530296 TATP17735 454 aaPredicted RBP18.9■□□□□ 0.62
CTSB-217ENST00000530296 PLEKHG2Q9H7P9 1386 aa18.9■□□□□ 0.62
CTSB-217ENST00000530296 IGSF1Q8N6C5 1336 aa18.89■□□□□ 0.61
CTSB-217ENST00000530296 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
CTSB-217ENST00000530296 RGPD2P0DJD1 1756 aa18.88■□□□□ 0.61
CTSB-217ENST00000530296 TUBGCP6Q96RT7 1819 aa18.88■□□□□ 0.61
CTSB-217ENST00000530296 IL13P35225 146 aa18.88■□□□□ 0.61
CTSB-217ENST00000530296 PELP1Q8IZL8 1130 aaKnown RBP18.88■□□□□ 0.61
CTSB-217ENST00000530296 NUDCQ9Y266 331 aa18.88■□□□□ 0.61
CTSB-217ENST00000530296 USHBP1Q8N6Y0 703 aa18.87■□□□□ 0.61
CTSB-217ENST00000530296 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
CTSB-217ENST00000530296 MEGF6O75095 1541 aa18.86■□□□□ 0.61
CTSB-217ENST00000530296 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
CTSB-217ENST00000530296 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
CTSB-217ENST00000530296 MSH5O43196 834 aa18.86■□□□□ 0.61
CTSB-217ENST00000530296 MYBBP1AQ9BQG0 1328 aaKnown RBP18.85■□□□□ 0.61
CTSB-217ENST00000530296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.85■□□□□ 0.61
CTSB-217ENST00000530296 SPG7Q9UQ90 795 aa18.85■□□□□ 0.61
CTSB-217ENST00000530296 CD2APQ9Y5K6 639 aa18.84■□□□□ 0.61
CTSB-217ENST00000530296 KCNQ4P56696 695 aa18.83■□□□□ 0.6
CTSB-217ENST00000530296 COL23A1Q86Y22 540 aaPredicted RBP18.83■□□□□ 0.6
CTSB-217ENST00000530296 SMARCC1Q92922 1105 aaPredicted RBP18.83■□□□□ 0.6
CTSB-217ENST00000530296 PRKRIP1Q9H875 184 aaPredicted RBP18.83■□□□□ 0.6
CTSB-217ENST00000530296 COL3A1P02461 1466 aaPredicted RBP18.83■□□□□ 0.6
CTSB-217ENST00000530296 KDRP35968 1356 aa18.82■□□□□ 0.6
CTSB-217ENST00000530296 SULT6B1Q6IMI4 303 aa18.82■□□□□ 0.6
CTSB-217ENST00000530296 NLGN2Q8NFZ4 835 aa18.82■□□□□ 0.6
CTSB-217ENST00000530296 U2SURPO15042 1029 aaKnown RBP18.81■□□□□ 0.6
CTSB-217ENST00000530296 AMOTQ4VCS5 1084 aa18.81■□□□□ 0.6
CTSB-217ENST00000530296 C5P01031 1676 aa18.81■□□□□ 0.6
CTSB-217ENST00000530296 ANP32CO43423 234 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms