RNA–Protein interactions for RNA: ENST00000530164.5

RPS3-214, Transcript of ribosomal protein S3, humanhuman

TSL 1 (best) BASIC

Gene RPS3, Length 1,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-214ENST00000530164 KIAA1210Q9ULL0 1709 aa12.58□□□□□ -0.4
RPS3-214ENST00000530164 MYOM1P52179 1685 aa12.57□□□□□ -0.4
RPS3-214ENST00000530164 COL18A1P39060 1754 aa12.57□□□□□ -0.4
RPS3-214ENST00000530164 CCDC136Q96JN2 1154 aa12.57□□□□□ -0.4
RPS3-214ENST00000530164 ST20-MTHFSA0A0A6YYL1 179 aa12.56□□□□□ -0.4
RPS3-214ENST00000530164 MAP3K5Q99683 1374 aa12.55□□□□□ -0.4
RPS3-214ENST00000530164 SOX12O15370 315 aa12.55□□□□□ -0.4
RPS3-214ENST00000530164 NOP58Q9Y2X3 529 aaKnown RBP12.55□□□□□ -0.4
RPS3-214ENST00000530164 TTC21BQ7Z4L5 1316 aa12.55□□□□□ -0.4
RPS3-214ENST00000530164 EVC2Q86UK5 1308 aa12.55□□□□□ -0.4
RPS3-214ENST00000530164 TTC21AQ8NDW8 1320 aa12.54□□□□□ -0.4
RPS3-214ENST00000530164 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
RPS3-214ENST00000530164 CHD4Q14839 1912 aa12.53□□□□□ -0.4
RPS3-214ENST00000530164 AKAP12Q02952 1782 aa12.53□□□□□ -0.4
RPS3-214ENST00000530164 PIK3C2AO00443 1686 aa12.53□□□□□ -0.4
RPS3-214ENST00000530164 RRP1P56182 461 aaKnown RBP12.53□□□□□ -0.4
RPS3-214ENST00000530164 GPR162Q16538 588 aa12.53□□□□□ -0.4
RPS3-214ENST00000530164 TNS2Q63HR2 1409 aa12.52□□□□□ -0.4
RPS3-214ENST00000530164 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
RPS3-214ENST00000530164 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
RPS3-214ENST00000530164 WNK3Q9BYP7 1800 aa12.51□□□□□ -0.41
RPS3-214ENST00000530164 SLC16A10Q8TF71 515 aa12.51□□□□□ -0.41
RPS3-214ENST00000530164 IL2RBP14784 551 aa12.51□□□□□ -0.41
RPS3-214ENST00000530164 ANP32AP39687 249 aaKnown RBP12.51□□□□□ -0.41
RPS3-214ENST00000530164 LRRC4BQ9NT99 713 aa12.51□□□□□ -0.41
RPS3-214ENST00000530164 ERBB3P21860 1342 aa12.5□□□□□ -0.41
RPS3-214ENST00000530164 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
RPS3-214ENST00000530164 PER1O15534 1290 aaPredicted RBP12.5□□□□□ -0.41
RPS3-214ENST00000530164 ZNF827Q17R98 1081 aa12.5□□□□□ -0.41
RPS3-214ENST00000530164 NLRP2Q9NX02 1062 aa12.5□□□□□ -0.41
RPS3-214ENST00000530164 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
RPS3-214ENST00000530164 MS4A1P11836 297 aa12.49□□□□□ -0.41
RPS3-214ENST00000530164 IPO9Q96P70 1041 aaKnown RBP12.49□□□□□ -0.41
RPS3-214ENST00000530164 QRICH2Q9H0J4 1663 aa12.49□□□□□ -0.41
RPS3-214ENST00000530164 NFAT5O94916 1531 aa12.48□□□□□ -0.41
RPS3-214ENST00000530164 ABCC6O95255 1503 aa12.48□□□□□ -0.41
RPS3-214ENST00000530164 POLD1P28340 1107 aa12.48□□□□□ -0.41
RPS3-214ENST00000530164 SLC27A3Q5K4L6 730 aa12.48□□□□□ -0.41
RPS3-214ENST00000530164 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
RPS3-214ENST00000530164 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
RPS3-214ENST00000530164 RGPD5Q99666 1765 aa12.48□□□□□ -0.41
RPS3-214ENST00000530164 RCAN3Q9UKA8 241 aa12.48□□□□□ -0.41
RPS3-214ENST00000530164 NHSQ6T4R5 1651 aa12.47□□□□□ -0.41
RPS3-214ENST00000530164 PAPPAQ13219 1627 aa12.47□□□□□ -0.41
RPS3-214ENST00000530164 KLHL34Q8N239 644 aa12.46□□□□□ -0.41
RPS3-214ENST00000530164 TESK2Q96S53 571 aa12.46□□□□□ -0.41
RPS3-214ENST00000530164 USP31Q70CQ4 1352 aa12.46□□□□□ -0.41
RPS3-214ENST00000530164 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.46□□□□□ -0.42
RPS3-214ENST00000530164 KAT6BQ8WYB5 2073 aa12.46□□□□□ -0.42
RPS3-214ENST00000530164 ANKRD24Q8TF21 1146 aa12.45□□□□□ -0.42
RPS3-214ENST00000530164 TFCP2L1Q9NZI6 479 aa12.45□□□□□ -0.42
RPS3-214ENST00000530164 PNPLA7Q6ZV29 1317 aa12.45□□□□□ -0.42
RPS3-214ENST00000530164 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
RPS3-214ENST00000530164 TMF1P82094 1093 aa12.43□□□□□ -0.42
RPS3-214ENST00000530164 NME9Q86XW9 330 aa12.43□□□□□ -0.42
RPS3-214ENST00000530164 NLGN2Q8NFZ4 835 aa12.43□□□□□ -0.42
RPS3-214ENST00000530164 DDX54Q8TDD1 881 aaKnown RBP12.43□□□□□ -0.42
RPS3-214ENST00000530164 BTAF1O14981 1849 aa12.43□□□□□ -0.42
RPS3-214ENST00000530164 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
RPS3-214ENST00000530164 NPC1L1Q9UHC9 1359 aa12.42□□□□□ -0.42
RPS3-214ENST00000530164 ZBTB47Q9UFB7 747 aaPredicted RBP12.42□□□□□ -0.42
RPS3-214ENST00000530164 KCNQ4P56696 695 aa12.41□□□□□ -0.42
RPS3-214ENST00000530164 EXOC6Q8TAG9 804 aa12.41□□□□□ -0.42
RPS3-214ENST00000530164 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
RPS3-214ENST00000530164 SBNO2Q9Y2G9 1366 aa12.41□□□□□ -0.42
RPS3-214ENST00000530164 DEKP35659 375 aaKnown RBP12.4□□□□□ -0.42
RPS3-214ENST00000530164 PRIM1P49642 420 aaKnown RBP12.4□□□□□ -0.42
RPS3-214ENST00000530164 YBX3P16989 372 aaKnown RBP eCLIP12.4□□□□□ -0.42
RPS3-214ENST00000530164 IP6K1Q92551 441 aa12.4□□□□□ -0.42
RPS3-214ENST00000530164 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
RPS3-214ENST00000530164 HDGFL2Q7Z4V5 671 aaPredicted RBP12.39□□□□□ -0.43
RPS3-214ENST00000530164 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
RPS3-214ENST00000530164 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
RPS3-214ENST00000530164 COL24A1Q17RW2 1714 aa12.38□□□□□ -0.43
RPS3-214ENST00000530164 CD163L1Q9NR16 1453 aa12.38□□□□□ -0.43
RPS3-214ENST00000530164 CNGB1Q14028 1251 aaPredicted RBP12.38□□□□□ -0.43
RPS3-214ENST00000530164 BACH2Q9BYV9 841 aa12.38□□□□□ -0.43
RPS3-214ENST00000530164 PANK3Q9H999 370 aa12.38□□□□□ -0.43
RPS3-214ENST00000530164 CCNL1Q9UK58 526 aaPredicted RBP12.38□□□□□ -0.43
RPS3-214ENST00000530164 QSER1Q2KHR3 1735 aa12.37□□□□□ -0.43
RPS3-214ENST00000530164 MON2Q7Z3U7 1717 aa12.37□□□□□ -0.43
RPS3-214ENST00000530164 COL23A1Q86Y22 540 aaPredicted RBP12.37□□□□□ -0.43
RPS3-214ENST00000530164 LTV1Q96GA3 475 aaPredicted RBP12.37□□□□□ -0.43
RPS3-214ENST00000530164 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
RPS3-214ENST00000530164 TERF2IPQ9NYB0 399 aa12.37□□□□□ -0.43
RPS3-214ENST00000530164 EDC4Q6P2E9 1401 aaKnown RBP12.36□□□□□ -0.43
RPS3-214ENST00000530164 PDE4AP27815 886 aa12.36□□□□□ -0.43
RPS3-214ENST00000530164 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
RPS3-214ENST00000530164 USP54Q70EL1 1684 aa12.36□□□□□ -0.43
RPS3-214ENST00000530164 GPBP1L1Q9HC44 474 aaPredicted RBP12.36□□□□□ -0.43
RPS3-214ENST00000530164 CD2APQ9Y5K6 639 aa12.36□□□□□ -0.43
RPS3-214ENST00000530164 LTN1O94822 1766 aa12.35□□□□□ -0.43
RPS3-214ENST00000530164 NSD2O96028 1365 aa12.35□□□□□ -0.43
RPS3-214ENST00000530164 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
RPS3-214ENST00000530164 RTL5Q5HYW3 569 aaPredicted RBP12.34□□□□□ -0.43
RPS3-214ENST00000530164 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
RPS3-214ENST00000530164 ATP10DQ9P241 1426 aa12.34□□□□□ -0.43
RPS3-214ENST00000530164 NGEFQ8N5V2 710 aa12.34□□□□□ -0.43
RPS3-214ENST00000530164 PUS7Q96PZ0 661 aaKnown RBP12.34□□□□□ -0.43
RPS3-214ENST00000530164 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms